RNA–Protein interactions for RNA: ENST00000559819.5

LRRC28-216, Transcript of leucine rich repeat containing 28, humanhuman

TSL 2

Gene LRRC28, Length 2,712 nt, Biotype retained intron, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-216ENST00000559819 SLC5A9Q2M3M2 681 aa9.99□□□□□ -0.81
LRRC28-216ENST00000559819 HACD2Q6Y1H2 254 aa9.99□□□□□ -0.81
LRRC28-216ENST00000559819 SPPL2CQ8IUH8 684 aa9.99□□□□□ -0.81
LRRC28-216ENST00000559819 CHERPQ8IWX8 916 aaKnown RBP9.99□□□□□ -0.81
LRRC28-216ENST00000559819 ABI1Q8IZP0 508 aa9.99□□□□□ -0.81
LRRC28-216ENST00000559819 AHI1Q8N157 1196 aa9.99□□□□□ -0.81
LRRC28-216ENST00000559819 RHEBL1Q8TAI7 183 aa9.99□□□□□ -0.81
LRRC28-216ENST00000559819 GRIN3AQ8TCU5 1115 aa9.99□□□□□ -0.81
LRRC28-216ENST00000559819 TOP1MTQ969P6 601 aa9.99□□□□□ -0.81
LRRC28-216ENST00000559819 KIAA1191Q96A73 305 aa9.99□□□□□ -0.81
LRRC28-216ENST00000559819 VPS33AQ96AX1 596 aa9.99□□□□□ -0.81
LRRC28-216ENST00000559819 RPL10LQ96L21 214 aaKnown RBP9.99□□□□□ -0.81
LRRC28-216ENST00000559819 ZNF512Q96ME7 567 aaPredicted RBP9.99□□□□□ -0.81
LRRC28-216ENST00000559819 ACOX2Q99424 681 aa9.99□□□□□ -0.81
LRRC28-216ENST00000559819 NACA2Q9H009 215 aa9.99□□□□□ -0.81
LRRC28-216ENST00000559819 ZNF696Q9H7X3 374 aa9.99□□□□□ -0.81
LRRC28-216ENST00000559819 SCUBE2Q9NQ36 999 aa9.99□□□□□ -0.81
LRRC28-216ENST00000559819 GKN1Q9NS71 199 aa9.99□□□□□ -0.81
LRRC28-216ENST00000559819 SEPT3Q9UH03 358 aa9.99□□□□□ -0.81
LRRC28-216ENST00000559819 GREB1Q4ZG55 1949 aa9.99□□□□□ -0.81
LRRC28-216ENST00000559819 FAM149AA5PLN7 773 aa9.98□□□□□ -0.81
LRRC28-216ENST00000559819 CCDC160A6NGH7 325 aa9.98□□□□□ -0.81
LRRC28-216ENST00000559819 SAC3D1A6NKF1 404 aa9.98□□□□□ -0.81
LRRC28-216ENST00000559819 FXYD1O00168 92 aa9.98□□□□□ -0.81
LRRC28-216ENST00000559819 SOCS2O14508 198 aa9.98□□□□□ -0.81
LRRC28-216ENST00000559819 ANGPT2O15123 496 aa9.98□□□□□ -0.81
LRRC28-216ENST00000559819 INSIG1O15503 277 aa9.98□□□□□ -0.81
LRRC28-216ENST00000559819 TPST1O60507 370 aa9.98□□□□□ -0.81
LRRC28-216ENST00000559819 PSMC3P17980 439 aa9.98□□□□□ -0.81
LRRC28-216ENST00000559819 LBPP18428 481 aa9.98□□□□□ -0.81
LRRC28-216ENST00000559819 RPL5P46777 297 aaKnown RBP9.98□□□□□ -0.81
LRRC28-216ENST00000559819 HK3P52790 923 aa9.98□□□□□ -0.81
LRRC28-216ENST00000559819 SREBF2Q12772 1141 aa9.98□□□□□ -0.81
LRRC28-216ENST00000559819 TCTN1Q2MV58 587 aa9.98□□□□□ -0.81
LRRC28-216ENST00000559819 MYLK3Q32MK0 819 aa9.98□□□□□ -0.81
LRRC28-216ENST00000559819 ALG1LQ6GMV1 187 aa9.98□□□□□ -0.81
LRRC28-216ENST00000559819 LINGO4Q6UY18 593 aa9.98□□□□□ -0.81
LRRC28-216ENST00000559819 RNF180Q86T96 592 aa9.98□□□□□ -0.81
LRRC28-216ENST00000559819 SYVN1Q86TM6 617 aa9.98□□□□□ -0.81
LRRC28-216ENST00000559819 SLC15A3Q8IY34 581 aa9.98□□□□□ -0.81
LRRC28-216ENST00000559819 TTC16Q8NEE8 873 aa9.98□□□□□ -0.81
LRRC28-216ENST00000559819 STAG3L4Q8TBR4 150 aa9.98□□□□□ -0.81
LRRC28-216ENST00000559819 PBXIP1Q96AQ6 731 aa9.98□□□□□ -0.81
LRRC28-216ENST00000559819 ZNF597Q96LX8 424 aa9.98□□□□□ -0.81
LRRC28-216ENST00000559819 CASD1Q96PB1 797 aa9.98□□□□□ -0.81
LRRC28-216ENST00000559819 C1orf50Q9BV19 199 aa9.98□□□□□ -0.81
LRRC28-216ENST00000559819 MRPS26Q9BYN8 205 aaKnown RBP9.98□□□□□ -0.81
LRRC28-216ENST00000559819 CCDC68Q9H2F9 335 aa9.98□□□□□ -0.81
LRRC28-216ENST00000559819 POPDC3Q9HBV1 291 aa9.98□□□□□ -0.81
LRRC28-216ENST00000559819 TMEM161AQ9NX61 479 aa9.98□□□□□ -0.81
LRRC28-216ENST00000559819 TAS2R13Q9NYV9 303 aa9.98□□□□□ -0.81
LRRC28-216ENST00000559819 ZNF225Q9UK10 706 aa9.98□□□□□ -0.81
LRRC28-216ENST00000559819 AURKCQ9UQB9 309 aa9.98□□□□□ -0.81
LRRC28-216ENST00000559819 THSD7BQ9C0I4 1608 aa9.98□□□□□ -0.81
LRRC28-216ENST00000559819 SMIM31A0A1B0GVY4 71 aa9.98□□□□□ -0.81
LRRC28-216ENST00000559819 IQCF5A8MTL0 148 aa9.98□□□□□ -0.81
LRRC28-216ENST00000559819 CBX4O00257 560 aa9.98□□□□□ -0.81
LRRC28-216ENST00000559819 AKAP10O43572 662 aa9.98□□□□□ -0.81
LRRC28-216ENST00000559819 KLKB1P03952 638 aa9.98□□□□□ -0.81
LRRC28-216ENST00000559819 BMP1P13497 986 aa9.98□□□□□ -0.81
LRRC28-216ENST00000559819 RPL10P27635 214 aaKnown RBP9.98□□□□□ -0.81
LRRC28-216ENST00000559819 MC4RP32245 332 aa9.98□□□□□ -0.81
LRRC28-216ENST00000559819 HSPA13P48723 471 aa9.98□□□□□ -0.81
LRRC28-216ENST00000559819 RAD51Q06609 339 aa9.98□□□□□ -0.81
LRRC28-216ENST00000559819 LCP2Q13094 533 aa9.98□□□□□ -0.81
LRRC28-216ENST00000559819 RPS6KA2Q15349 733 aa9.98□□□□□ -0.81
LRRC28-216ENST00000559819 LARP7Q4G0J3 582 aaKnown RBP eCLIP9.98□□□□□ -0.81
LRRC28-216ENST00000559819 CTSL3PQ5NE16 218 aa9.98□□□□□ -0.81
LRRC28-216ENST00000559819 AFTPHQ6ULP2 937 aa9.98□□□□□ -0.81
LRRC28-216ENST00000559819 PCYOX1LQ8NBM8 494 aa9.98□□□□□ -0.81
LRRC28-216ENST00000559819 OR2T34Q8NGX1 318 aa9.98□□□□□ -0.81
LRRC28-216ENST00000559819 OR2T3Q8NH03 318 aa9.98□□□□□ -0.81
LRRC28-216ENST00000559819 PEX13Q92968 403 aa9.98□□□□□ -0.81
LRRC28-216ENST00000559819 FUBP1Q96AE4 644 aaKnown RBP9.98□□□□□ -0.81
LRRC28-216ENST00000559819 SPATA17Q96L03 361 aa9.98□□□□□ -0.81
LRRC28-216ENST00000559819 ZNF599Q96NL3 588 aa9.98□□□□□ -0.81
LRRC28-216ENST00000559819 BIRC8Q96P09 236 aa9.98□□□□□ -0.81
LRRC28-216ENST00000559819 PSKH2Q96QS6 385 aa9.98□□□□□ -0.81
LRRC28-216ENST00000559819 TDRD1Q9BXT4 1180 aaKnown RBP9.98□□□□□ -0.81
LRRC28-216ENST00000559819 DERL2Q9GZP9 239 aa9.98□□□□□ -0.81
LRRC28-216ENST00000559819 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.98□□□□□ -0.81
LRRC28-216ENST00000559819 SYTL2Q9HCH5 934 aa9.98□□□□□ -0.81
LRRC28-216ENST00000559819 SARS2Q9NP81 518 aaKnown RBP9.98□□□□□ -0.81
LRRC28-216ENST00000559819 INTS10Q9NVR2 710 aaKnown RBP9.98□□□□□ -0.81
LRRC28-216ENST00000559819 LCHNA4D1U4 455 aa9.98□□□□□ -0.81
LRRC28-216ENST00000559819 ASPDHA6ND91 283 aa9.98□□□□□ -0.81
LRRC28-216ENST00000559819 ALDH2P05091 517 aa9.98□□□□□ -0.81
LRRC28-216ENST00000559819 RHOCP08134 193 aa9.98□□□□□ -0.81
LRRC28-216ENST00000559819 RPS17P08708 135 aaKnown RBP9.98□□□□□ -0.81
LRRC28-216ENST00000559819 ATP5C1P36542 298 aaKnown RBP9.98□□□□□ -0.81
LRRC28-216ENST00000559819 PRKCQQ04759 706 aa9.98□□□□□ -0.81
LRRC28-216ENST00000559819 LAMB3Q13751 1172 aa9.98□□□□□ -0.81
LRRC28-216ENST00000559819 APOFQ13790 326 aa9.98□□□□□ -0.81
LRRC28-216ENST00000559819 RBBP7Q16576 425 aa9.98□□□□□ -0.81
LRRC28-216ENST00000559819 C18orf21Q32NC0 220 aaPredicted RBP9.98□□□□□ -0.81
LRRC28-216ENST00000559819 ZRANB3Q5FWF4 1079 aa9.98□□□□□ -0.81
LRRC28-216ENST00000559819 RABL3Q5HYI8 236 aa9.98□□□□□ -0.81
LRRC28-216ENST00000559819 ANKS6Q68DC2 871 aa9.98□□□□□ -0.81
LRRC28-216ENST00000559819 KLHDC10Q6PID8 442 aa9.98□□□□□ -0.81
LRRC28-216ENST00000559819 BBS5Q8N3I7 341 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms