RNA–Protein interactions for RNA: ENST00000559711.5

USP3-213, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 5 BASIC

Gene USP3, Length 1,693 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-213ENST00000559711 KCNC1P48547 511 aa12.61□□□□□ -0.39
USP3-213ENST00000559711 NAGLUP54802 743 aa12.61□□□□□ -0.39
USP3-213ENST00000559711 BNIP1Q12981 228 aa12.61□□□□□ -0.39
USP3-213ENST00000559711 CHRNA6Q15825 494 aa12.61□□□□□ -0.39
USP3-213ENST00000559711 CTC1Q2NKJ3 1217 aa12.61□□□□□ -0.39
USP3-213ENST00000559711 ZNF805Q5CZA5 627 aa12.61□□□□□ -0.39
USP3-213ENST00000559711 PAQR3Q6TCH7 311 aa12.61□□□□□ -0.39
USP3-213ENST00000559711 WDR75Q8IWA0 830 aaKnown RBP12.61□□□□□ -0.39
USP3-213ENST00000559711 NKAPQ8N5F7 415 aaKnown RBP12.61□□□□□ -0.39
USP3-213ENST00000559711 ST13P5Q8NFI4 369 aaPredicted RBP12.61□□□□□ -0.39
USP3-213ENST00000559711 PTERQ96BW5 349 aa12.61□□□□□ -0.39
USP3-213ENST00000559711 PLEKHG4BQ96PX9 1271 aa12.61□□□□□ -0.39
USP3-213ENST00000559711 GPR21Q99679 349 aa12.61□□□□□ -0.39
USP3-213ENST00000559711 DERL2Q9GZP9 239 aa12.61□□□□□ -0.39
USP3-213ENST00000559711 MTG2Q9H4K7 406 aa12.61□□□□□ -0.39
USP3-213ENST00000559711 TFB2MQ9H5Q4 396 aaKnown RBP12.61□□□□□ -0.39
USP3-213ENST00000559711 HEY2Q9UBP5 337 aa12.61□□□□□ -0.39
USP3-213ENST00000559711 HAO1Q9UJM8 370 aa12.61□□□□□ -0.39
USP3-213ENST00000559711 FAM50BQ9Y247 325 aa12.61□□□□□ -0.39
USP3-213ENST00000559711 CCDC189A1A4V9 331 aa12.6□□□□□ -0.39
USP3-213ENST00000559711 UPK3BL1B0FP48 263 aa12.6□□□□□ -0.39
USP3-213ENST00000559711 UPK3BL2E5RIL1 263 aa12.6□□□□□ -0.39
USP3-213ENST00000559711 F8W8V4 182 aa12.6□□□□□ -0.39
USP3-213ENST00000559711 ZBTB14O43829 449 aa12.6□□□□□ -0.39
USP3-213ENST00000559711 NPHS1O60500 1241 aa12.6□□□□□ -0.39
USP3-213ENST00000559711 SNUPNO95149 360 aaKnown RBP12.6□□□□□ -0.39
USP3-213ENST00000559711 HSPA4LO95757 839 aa12.6□□□□□ -0.39
USP3-213ENST00000559711 C1SP09871 688 aa12.6□□□□□ -0.39
USP3-213ENST00000559711 KITP10721 976 aa12.6□□□□□ -0.39
USP3-213ENST00000559711 CYP2A6P11509 494 aaPredicted RBP12.6□□□□□ -0.39
USP3-213ENST00000559711 ZNF7P17097 686 aaPredicted RBP12.6□□□□□ -0.39
USP3-213ENST00000559711 PSMC3P17980 439 aa12.6□□□□□ -0.39
USP3-213ENST00000559711 UGT1A6P19224 532 aa12.6□□□□□ -0.39
USP3-213ENST00000559711 UGT1A1P22309 533 aa12.6□□□□□ -0.39
USP3-213ENST00000559711 UGT1A4P22310 534 aa12.6□□□□□ -0.39
USP3-213ENST00000559711 NFKBIAP25963 317 aa12.6□□□□□ -0.39
USP3-213ENST00000559711 ACRV1P26436 265 aa12.6□□□□□ -0.39
USP3-213ENST00000559711 VIPR1P32241 457 aa12.6□□□□□ -0.39
USP3-213ENST00000559711 CA5AP35218 305 aa12.6□□□□□ -0.39
USP3-213ENST00000559711 UGT1A3P35503 534 aa12.6□□□□□ -0.39
USP3-213ENST00000559711 UGT1A5P35504 534 aa12.6□□□□□ -0.39
USP3-213ENST00000559711 SERPINB5P36952 375 aa12.6□□□□□ -0.39
USP3-213ENST00000559711 OPRD1P41143 372 aa12.6□□□□□ -0.39
USP3-213ENST00000559711 EIF2DP41214 584 aaKnown RBP12.6□□□□□ -0.39
USP3-213ENST00000559711 SCTRP47872 440 aa12.6□□□□□ -0.39
USP3-213ENST00000559711 SPINT3P49223 89 aa12.6□□□□□ -0.39
USP3-213ENST00000559711 AQP5P55064 265 aa12.6□□□□□ -0.39
USP3-213ENST00000559711 ATP6V0D1P61421 351 aa12.6□□□□□ -0.39
USP3-213ENST00000559711 SEMG2Q02383 582 aa12.6□□□□□ -0.39
USP3-213ENST00000559711 RCN2Q14257 317 aa12.6□□□□□ -0.39
USP3-213ENST00000559711 HNRNPA1L2Q32P51 320 aaKnown RBP12.6□□□□□ -0.39
USP3-213ENST00000559711 PIWIL4Q7Z3Z4 852 aaKnown RBP12.6□□□□□ -0.39
USP3-213ENST00000559711 MTDHQ86UE4 582 aaKnown RBP12.6□□□□□ -0.39
USP3-213ENST00000559711 RBFAQ8N0V3 343 aa12.6□□□□□ -0.39
USP3-213ENST00000559711 TERB1Q8NA31 727 aa12.6□□□□□ -0.39
USP3-213ENST00000559711 DTX3LQ8TDB6 740 aa12.6□□□□□ -0.39
USP3-213ENST00000559711 PBXIP1Q96AQ6 731 aa12.6□□□□□ -0.39
USP3-213ENST00000559711 SKA1Q96BD8 255 aa12.6□□□□□ -0.39
USP3-213ENST00000559711 SGF29Q96ES7 293 aa12.6□□□□□ -0.39
USP3-213ENST00000559711 WWP1Q9H0M0 922 aa12.6□□□□□ -0.39
USP3-213ENST00000559711 MYLK2Q9H1R3 596 aa12.6□□□□□ -0.39
USP3-213ENST00000559711 STN1Q9H668 368 aaKnown RBP12.6□□□□□ -0.39
USP3-213ENST00000559711 ALG9Q9H6U8 611 aa12.6□□□□□ -0.39
USP3-213ENST00000559711 PNPOQ9NVS9 261 aa12.6□□□□□ -0.39
USP3-213ENST00000559711 GALPQ9UBC7 116 aa12.6□□□□□ -0.39
USP3-213ENST00000559711 MARCOQ9UEW3 520 aaPredicted RBP12.6□□□□□ -0.39
USP3-213ENST00000559711 C2orf16Q68DN1 1984 aa12.59□□□□□ -0.39
USP3-213ENST00000559711 ANKRD36A6QL64 1941 aa12.59□□□□□ -0.39
USP3-213ENST00000559711 GOLGA8CPA6NN73 597 aa12.59□□□□□ -0.39
USP3-213ENST00000559711 A8MT66 165 aa12.59□□□□□ -0.39
USP3-213ENST00000559711 H3BMM5 538 aa12.59□□□□□ -0.39
USP3-213ENST00000559711 ZNF195O14628 629 aa12.59□□□□□ -0.39
USP3-213ENST00000559711 NIPSNAP2O75323 286 aa12.59□□□□□ -0.39
USP3-213ENST00000559711 IPO13O94829 963 aaKnown RBP12.59□□□□□ -0.39
USP3-213ENST00000559711 KCNA5P22460 613 aa12.59□□□□□ -0.39
USP3-213ENST00000559711 GJA4P35212 333 aa12.59□□□□□ -0.39
USP3-213ENST00000559711 NFKB2Q00653 900 aa12.59□□□□□ -0.39
USP3-213ENST00000559711 KDSRQ06136 332 aa12.59□□□□□ -0.39
USP3-213ENST00000559711 DLX2Q07687 328 aaPredicted RBP12.59□□□□□ -0.39
USP3-213ENST00000559711 ACTN3Q08043 901 aaPredicted RBP12.59□□□□□ -0.39
USP3-213ENST00000559711 ARL13AQ5H913 290 aaPredicted RBP12.59□□□□□ -0.39
USP3-213ENST00000559711 C9orf64Q5T6V5 341 aa12.59□□□□□ -0.39
USP3-213ENST00000559711 UGT3A1Q6NUS8 523 aa12.59□□□□□ -0.39
USP3-213ENST00000559711 TRIM67Q6ZTA4 783 aa12.59□□□□□ -0.39
USP3-213ENST00000559711 SLC22A9Q8IVM8 553 aa12.59□□□□□ -0.39
USP3-213ENST00000559711 YAF2Q8IY57 180 aa12.59□□□□□ -0.39
USP3-213ENST00000559711 LSMEM2Q8N112 164 aa12.59□□□□□ -0.39
USP3-213ENST00000559711 NXPE1Q8N323 547 aa12.59□□□□□ -0.39
USP3-213ENST00000559711 TMIEQ8NEW7 156 aa12.59□□□□□ -0.39
USP3-213ENST00000559711 CD200R1Q8TD46 325 aa12.59□□□□□ -0.39
USP3-213ENST00000559711 KIAA1191Q96A73 305 aa12.59□□□□□ -0.39
USP3-213ENST00000559711 ERP27Q96DN0 273 aa12.59□□□□□ -0.39
USP3-213ENST00000559711 CNDP1Q96KN2 507 aa12.59□□□□□ -0.39
USP3-213ENST00000559711 RIPOR3Q96MK2 946 aa12.59□□□□□ -0.39
USP3-213ENST00000559711 SLC30A3Q99726 388 aa12.59□□□□□ -0.39
USP3-213ENST00000559711 CLPBQ9H078 707 aa12.59□□□□□ -0.39
USP3-213ENST00000559711 ILKAPQ9H0C8 392 aaPredicted RBP12.59□□□□□ -0.39
USP3-213ENST00000559711 TMEM245Q9H330 911 aa12.59□□□□□ -0.39
USP3-213ENST00000559711 POMKQ9H5K3 350 aa12.59□□□□□ -0.39
USP3-213ENST00000559711 ZNF576Q9H609 170 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms