RNA–Protein interactions for RNA: ENST00000559433.5

LRRC28-214, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-214ENST00000559433 AADACL2Q6P093 401 aa12.5□□□□□ -0.41
LRRC28-214ENST00000559433 FOXR1Q6PIV2 292 aa12.5□□□□□ -0.41
LRRC28-214ENST00000559433 KDELC1Q6UW63 502 aa12.5□□□□□ -0.41
LRRC28-214ENST00000559433 NRROSQ86YC3 692 aa12.5□□□□□ -0.41
LRRC28-214ENST00000559433 SFTPA2Q8IWL1 248 aa12.5□□□□□ -0.41
LRRC28-214ENST00000559433 SLC25A41Q8N5S1 370 aa12.5□□□□□ -0.41
LRRC28-214ENST00000559433 Q8N9G6 341 aaPredicted RBP12.5□□□□□ -0.41
LRRC28-214ENST00000559433 IPMKQ8NFU5 416 aa12.5□□□□□ -0.41
LRRC28-214ENST00000559433 ACTL9Q8TC94 416 aa12.5□□□□□ -0.41
LRRC28-214ENST00000559433 ZDHHC1Q8WTX9 485 aa12.5□□□□□ -0.41
LRRC28-214ENST00000559433 EID2BQ96D98 161 aa12.5□□□□□ -0.41
LRRC28-214ENST00000559433 SCARF2Q96GP6 870 aaPredicted RBP12.5□□□□□ -0.41
LRRC28-214ENST00000559433 FCRL5Q96RD9 977 aa12.5□□□□□ -0.41
LRRC28-214ENST00000559433 GFM1Q96RP9 751 aaKnown RBP12.5□□□□□ -0.41
LRRC28-214ENST00000559433 SRPK1Q96SB4 655 aaKnown RBP12.5□□□□□ -0.41
LRRC28-214ENST00000559433 FAM118BQ9BPY3 351 aa12.5□□□□□ -0.41
LRRC28-214ENST00000559433 SPATA16Q9BXB7 569 aa12.5□□□□□ -0.41
LRRC28-214ENST00000559433 STRADBQ9C0K7 418 aa12.5□□□□□ -0.41
LRRC28-214ENST00000559433 POLR1BQ9H9Y6 1135 aa12.5□□□□□ -0.41
LRRC28-214ENST00000559433 RAD18Q9NS91 495 aa12.5□□□□□ -0.41
LRRC28-214ENST00000559433 SPATS2LQ9NUQ6 558 aaKnown RBP12.5□□□□□ -0.41
LRRC28-214ENST00000559433 TRHDEQ9UKU6 1024 aa12.5□□□□□ -0.41
LRRC28-214ENST00000559433 CNOT6Q9ULM6 557 aaKnown RBP12.5□□□□□ -0.41
LRRC28-214ENST00000559433 PACSIN2Q9UNF0 486 aaPredicted RBP12.5□□□□□ -0.41
LRRC28-214ENST00000559433 SPO11Q9Y5K1 396 aa12.5□□□□□ -0.41
LRRC28-214ENST00000559433 OAS3Q9Y6K5 1087 aaKnown RBP12.5□□□□□ -0.41
LRRC28-214ENST00000559433 ADAMTS20P59510 1910 aa12.5□□□□□ -0.41
LRRC28-214ENST00000559433 CELSR3Q9NYQ7 3312 aa12.5□□□□□ -0.41
LRRC28-214ENST00000559433 UNC13CQ8NB66 2214 aa12.49□□□□□ -0.41
LRRC28-214ENST00000559433 RHPN2P1A8MT19 583 aa12.49□□□□□ -0.41
LRRC28-214ENST00000559433 MIF4GDA9UHW6 222 aaKnown RBP12.49□□□□□ -0.41
LRRC28-214ENST00000559433 STK10O94804 968 aaKnown RBP12.49□□□□□ -0.41
LRRC28-214ENST00000559433 FGF1P05230 155 aa12.49□□□□□ -0.41
LRRC28-214ENST00000559433 GLB1P16278 677 aa12.49□□□□□ -0.41
LRRC28-214ENST00000559433 ACTR1BP42025 376 aa12.49□□□□□ -0.41
LRRC28-214ENST00000559433 ABCG1P45844 678 aa12.49□□□□□ -0.41
LRRC28-214ENST00000559433 LSSP48449 732 aa12.49□□□□□ -0.41
LRRC28-214ENST00000559433 MAZP56270 477 aaKnown RBP12.49□□□□□ -0.41
LRRC28-214ENST00000559433 DCDC1P59894 354 aa12.49□□□□□ -0.41
LRRC28-214ENST00000559433 EIF3EP60228 445 aaKnown RBP12.49□□□□□ -0.41
LRRC28-214ENST00000559433 ACTR1AP61163 376 aa12.49□□□□□ -0.41
LRRC28-214ENST00000559433 CCL7P80098 99 aa12.49□□□□□ -0.41
LRRC28-214ENST00000559433 MPP3Q13368 585 aa12.49□□□□□ -0.41
LRRC28-214ENST00000559433 HLTFQ14527 1009 aaKnown RBP eCLIP12.49□□□□□ -0.41
LRRC28-214ENST00000559433 COL28A1Q2UY09 1125 aa12.49□□□□□ -0.41
LRRC28-214ENST00000559433 PYCR3Q53H96 274 aa12.49□□□□□ -0.41
LRRC28-214ENST00000559433 SIRPB2Q5JXA9 342 aa12.49□□□□□ -0.41
LRRC28-214ENST00000559433 ITPRIPL1Q6GPH6 555 aa12.49□□□□□ -0.41
LRRC28-214ENST00000559433 DARS2Q6PI48 645 aaKnown RBP12.49□□□□□ -0.41
LRRC28-214ENST00000559433 TMC3Q7Z5M5 1100 aa12.49□□□□□ -0.41
LRRC28-214ENST00000559433 CCNJLQ8IV13 435 aa12.49□□□□□ -0.41
LRRC28-214ENST00000559433 GPR26Q8NDV2 337 aa12.49□□□□□ -0.41
LRRC28-214ENST00000559433 ATXN7L3BQ96GX2 97 aa12.49□□□□□ -0.41
LRRC28-214ENST00000559433 OXNAD1Q96HP4 312 aaPredicted RBP12.49□□□□□ -0.41
LRRC28-214ENST00000559433 MRGPRX2Q96LB1 330 aa12.49□□□□□ -0.41
LRRC28-214ENST00000559433 ZNF578Q96N58 590 aaPredicted RBP12.49□□□□□ -0.41
LRRC28-214ENST00000559433 FSD1LQ9BXM9 530 aa12.49□□□□□ -0.41
LRRC28-214ENST00000559433 GBA3Q9H227 469 aa12.49□□□□□ -0.41
LRRC28-214ENST00000559433 VPS18Q9P253 973 aa12.49□□□□□ -0.41
LRRC28-214ENST00000559433 LRIT1Q9P2V4 623 aa12.49□□□□□ -0.41
LRRC28-214ENST00000559433 ZNHIT2Q9UHR6 403 aa12.49□□□□□ -0.41
LRRC28-214ENST00000559433 PLEKHM1Q9Y4G2 1056 aa12.49□□□□□ -0.41
LRRC28-214ENST00000559433 ST14Q9Y5Y6 855 aa12.49□□□□□ -0.41
LRRC28-214ENST00000559433 CAPN6Q9Y6Q1 641 aa12.49□□□□□ -0.41
LRRC28-214ENST00000559433 RNF215Q9Y6U7 377 aa12.49□□□□□ -0.41
LRRC28-214ENST00000559433 URB1O60287 2271 aaKnown RBP12.49□□□□□ -0.41
LRRC28-214ENST00000559433 ZNF106Q9H2Y7 1883 aaKnown RBP12.48□□□□□ -0.41
LRRC28-214ENST00000559433 A0A087WV48 116 aa12.48□□□□□ -0.41
LRRC28-214ENST00000559433 LOC285095A0A1B0GVY8 99 aa12.48□□□□□ -0.41
LRRC28-214ENST00000559433 D6RAR5 112 aa12.48□□□□□ -0.41
LRRC28-214ENST00000559433 NTN3O00634 580 aaPredicted RBP12.48□□□□□ -0.41
LRRC28-214ENST00000559433 AURKAO14965 403 aa12.48□□□□□ -0.41
LRRC28-214ENST00000559433 KCNN4O15554 427 aa12.48□□□□□ -0.41
LRRC28-214ENST00000559433 NUDT21O43809 227 aaKnown RBP12.48□□□□□ -0.41
LRRC28-214ENST00000559433 DNAJC6O75061 913 aa12.48□□□□□ -0.41
LRRC28-214ENST00000559433 ECEL1O95672 775 aa12.48□□□□□ -0.41
LRRC28-214ENST00000559433 RBP3P10745 1247 aa12.48□□□□□ -0.41
LRRC28-214ENST00000559433 CHRNA4P43681 627 aa12.48□□□□□ -0.41
LRRC28-214ENST00000559433 PPM1FP49593 454 aaPredicted RBP12.48□□□□□ -0.41
LRRC28-214ENST00000559433 LRP8Q14114 963 aa12.48□□□□□ -0.41
LRRC28-214ENST00000559433 TBC1D25Q3MII6 688 aa12.48□□□□□ -0.41
LRRC28-214ENST00000559433 C3orf38Q5JPI3 329 aa12.48□□□□□ -0.41
LRRC28-214ENST00000559433 SPRED1Q7Z699 444 aa12.48□□□□□ -0.41
LRRC28-214ENST00000559433 ARL14Q8N4G2 192 aa12.48□□□□□ -0.41
LRRC28-214ENST00000559433 TRAM1L1Q8N609 369 aa12.48□□□□□ -0.41
LRRC28-214ENST00000559433 ZSCAN5AQ9BUG6 496 aa12.48□□□□□ -0.41
LRRC28-214ENST00000559433 TSGA10Q9BZW7 698 aa12.48□□□□□ -0.41
LRRC28-214ENST00000559433 LRRN3Q9H3W5 708 aa12.48□□□□□ -0.41
LRRC28-214ENST00000559433 BPIFA1Q9NP55 256 aa12.48□□□□□ -0.41
LRRC28-214ENST00000559433 THSD1Q9NS62 852 aa12.48□□□□□ -0.41
LRRC28-214ENST00000559433 NFKBIL1Q9UBC1 381 aaPredicted RBP12.48□□□□□ -0.41
LRRC28-214ENST00000559433 APPL1Q9UKG1 709 aa12.48□□□□□ -0.41
LRRC28-214ENST00000559433 RALYQ9UKM9 306 aaKnown RBP12.48□□□□□ -0.41
LRRC28-214ENST00000559433 SATB2Q9UPW6 733 aa12.48□□□□□ -0.41
LRRC28-214ENST00000559433 PRKAB1Q9Y478 270 aa12.48□□□□□ -0.41
LRRC28-214ENST00000559433 ENTPD2Q9Y5L3 495 aa12.48□□□□□ -0.41
LRRC28-214ENST00000559433 NBEAQ8NFP9 2946 aa12.48□□□□□ -0.41
LRRC28-214ENST00000559433 LAMA5O15230 3695 aa12.48□□□□□ -0.41
LRRC28-214ENST00000559433 ZFHX4Q86UP3 3567 aa12.48□□□□□ -0.41
LRRC28-214ENST00000559433 GOLGA6L9A6NEM1 432 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms