RNA–Protein interactions for RNA: ENST00000559152.5

CLPX-204, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 2,228 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-204ENST00000559152 XIAPP98170 497 aa11.21□□□□□ -0.61
CLPX-204ENST00000559152 UGT3A2Q3SY77 523 aa11.21□□□□□ -0.61
CLPX-204ENST00000559152 PIGGQ5H8A4 983 aa11.21□□□□□ -0.61
CLPX-204ENST00000559152 TCHHL1Q5QJ38 904 aaPredicted RBP11.21□□□□□ -0.61
CLPX-204ENST00000559152 KANK2Q63ZY3 851 aa11.21□□□□□ -0.61
CLPX-204ENST00000559152 PSAPL1Q6NUJ1 521 aa11.21□□□□□ -0.61
CLPX-204ENST00000559152 ZFP1Q6P2D0 407 aa11.21□□□□□ -0.61
CLPX-204ENST00000559152 DHDDSQ86SQ9 333 aa11.21□□□□□ -0.61
CLPX-204ENST00000559152 KBTBD6Q86V97 674 aa11.21□□□□□ -0.61
CLPX-204ENST00000559152 FIBINQ8TAL6 211 aa11.21□□□□□ -0.61
CLPX-204ENST00000559152 DLG3Q92796 817 aa11.21□□□□□ -0.61
CLPX-204ENST00000559152 PDLIM5Q96HC4 596 aaKnown RBP11.21□□□□□ -0.61
CLPX-204ENST00000559152 CCT7Q99832 543 aa11.21□□□□□ -0.61
CLPX-204ENST00000559152 ZBED2Q9BTP6 218 aa11.21□□□□□ -0.61
CLPX-204ENST00000559152 YY1AP1Q9H869 796 aa11.21□□□□□ -0.61
CLPX-204ENST00000559152 BTN3A1O00481 513 aa11.21□□□□□ -0.62
CLPX-204ENST00000559152 PRMT5O14744 637 aaPredicted RBP11.21□□□□□ -0.62
CLPX-204ENST00000559152 GIPC1O14908 333 aa11.21□□□□□ -0.62
CLPX-204ENST00000559152 SNX2O60749 519 aa11.21□□□□□ -0.62
CLPX-204ENST00000559152 ECI2O75521 394 aa11.21□□□□□ -0.62
CLPX-204ENST00000559152 CRCPO75575 148 aa11.21□□□□□ -0.62
CLPX-204ENST00000559152 FGF18O76093 207 aa11.21□□□□□ -0.62
CLPX-204ENST00000559152 FGF19O95750 216 aa11.21□□□□□ -0.62
CLPX-204ENST00000559152 CHEK2O96017 543 aa11.21□□□□□ -0.62
CLPX-204ENST00000559152 CNPP09543 421 aaKnown RBP11.21□□□□□ -0.62
CLPX-204ENST00000559152 PRSS56P0CW18 603 aa11.21□□□□□ -0.62
CLPX-204ENST00000559152 ENO3P13929 434 aaPredicted RBP11.21□□□□□ -0.62
CLPX-204ENST00000559152 ZNF7P17097 686 aaPredicted RBP11.21□□□□□ -0.62
CLPX-204ENST00000559152 CA8P35219 290 aa11.21□□□□□ -0.62
CLPX-204ENST00000559152 PTPN5P54829 565 aa11.21□□□□□ -0.62
CLPX-204ENST00000559152 CDH13P55290 713 aa11.21□□□□□ -0.62
CLPX-204ENST00000559152 CLCQ05315 142 aa11.21□□□□□ -0.62
CLPX-204ENST00000559152 PTK2BQ14289 1009 aa11.21□□□□□ -0.62
CLPX-204ENST00000559152 SETMARQ53H47 684 aaPredicted RBP11.21□□□□□ -0.62
CLPX-204ENST00000559152 HOMEZQ8IX15 550 aa11.21□□□□□ -0.62
CLPX-204ENST00000559152 PIANPQ8IYJ0 282 aa11.21□□□□□ -0.62
CLPX-204ENST00000559152 PAF1Q8N7H5 531 aa11.21□□□□□ -0.62
CLPX-204ENST00000559152 PIH1D2Q8WWB5 315 aa11.21□□□□□ -0.62
CLPX-204ENST00000559152 FUBP1Q96AE4 644 aaKnown RBP11.21□□□□□ -0.62
CLPX-204ENST00000559152 MARK4Q96L34 752 aa11.21□□□□□ -0.62
CLPX-204ENST00000559152 NUSAP1Q9BXS6 441 aaKnown RBP11.21□□□□□ -0.62
CLPX-204ENST00000559152 ATP13A3Q9H7F0 1226 aa11.21□□□□□ -0.62
CLPX-204ENST00000559152 ZFYVE1Q9HBF4 777 aa11.21□□□□□ -0.62
CLPX-204ENST00000559152 BPIFA1Q9NP55 256 aa11.21□□□□□ -0.62
CLPX-204ENST00000559152 ABCB8Q9NUT2 735 aa11.21□□□□□ -0.62
CLPX-204ENST00000559152 CFAP97Q9P2B7 532 aa11.21□□□□□ -0.62
CLPX-204ENST00000559152 EPS15L1Q9UBC2 864 aa11.21□□□□□ -0.62
CLPX-204ENST00000559152 PPM1HQ9ULR3 514 aa11.21□□□□□ -0.62
CLPX-204ENST00000559152 DNAJC15Q9Y5T4 150 aa11.21□□□□□ -0.62
CLPX-204ENST00000559152 BBIP1A8MTZ0 92 aa11.2□□□□□ -0.62
CLPX-204ENST00000559152 VGLL3A8MV65 326 aa11.2□□□□□ -0.62
CLPX-204ENST00000559152 HTRA2O43464 458 aaPredicted RBP11.2□□□□□ -0.62
CLPX-204ENST00000559152 RPS17P08708 135 aaKnown RBP11.2□□□□□ -0.62
CLPX-204ENST00000559152 CSF2RAP15509 400 aa11.2□□□□□ -0.62
CLPX-204ENST00000559152 RPS3P23396 243 aaKnown RBP eCLIP11.2□□□□□ -0.623e-6■■■□□ 16.9
CLPX-204ENST00000559152 EEF1DP29692 281 aaKnown RBP11.2□□□□□ -0.62
CLPX-204ENST00000559152 PSMD8P48556 350 aa11.2□□□□□ -0.62
CLPX-204ENST00000559152 MRPS35P82673 323 aaKnown RBP11.2□□□□□ -0.62
CLPX-204ENST00000559152 KLC1Q07866 573 aa11.2□□□□□ -0.62
CLPX-204ENST00000559152 TSNQ15631 228 aaKnown RBP11.2□□□□□ -0.62
CLPX-204ENST00000559152 ZNF423Q2M1K9 1284 aa11.2□□□□□ -0.62
CLPX-204ENST00000559152 AGKQ53H12 422 aa11.2□□□□□ -0.62
CLPX-204ENST00000559152 CTSL3PQ5NE16 218 aa11.2□□□□□ -0.62
CLPX-204ENST00000559152 ATXN7L2Q5T6C5 722 aaPredicted RBP11.2□□□□□ -0.62
CLPX-204ENST00000559152 CLEC6AQ6EIG7 209 aa11.2□□□□□ -0.62
CLPX-204ENST00000559152 IRGCQ6NXR0 463 aa11.2□□□□□ -0.62
CLPX-204ENST00000559152 HACD2Q6Y1H2 254 aa11.2□□□□□ -0.62
CLPX-204ENST00000559152 TMCO2Q7Z6W1 182 aaPredicted RBP11.2□□□□□ -0.62
CLPX-204ENST00000559152 GPSM1Q86YR5 675 aa11.2□□□□□ -0.62
CLPX-204ENST00000559152 CD200R1Q8TD46 325 aa11.2□□□□□ -0.62
CLPX-204ENST00000559152 TRPC4APQ8TEL6 797 aa11.2□□□□□ -0.62
CLPX-204ENST00000559152 TWIST2Q8WVJ9 160 aa11.2□□□□□ -0.62
CLPX-204ENST00000559152 FAM136AQ96C01 138 aa11.2□□□□□ -0.62
CLPX-204ENST00000559152 P2RY12Q9H244 342 aa11.2□□□□□ -0.62
CLPX-204ENST00000559152 C11orf49Q9H6J7 331 aa11.2□□□□□ -0.62
CLPX-204ENST00000559152 TNFRSF12AQ9NP84 129 aa11.2□□□□□ -0.62
CLPX-204ENST00000559152 C6orf203Q9P0P8 240 aaPredicted RBP11.2□□□□□ -0.62
CLPX-204ENST00000559152 LTBP2Q14767 1821 aa11.2□□□□□ -0.62
CLPX-204ENST00000559152 KIAA0100Q14667 2235 aaKnown RBP11.2□□□□□ -0.62
CLPX-204ENST00000559152 A0A0J9YYE9 177 aa11.2□□□□□ -0.62
CLPX-204ENST00000559152 CFLARO15519 480 aa11.2□□□□□ -0.62
CLPX-204ENST00000559152 SIX3O95343 332 aaPredicted RBP11.2□□□□□ -0.62
CLPX-204ENST00000559152 TRBC1P01850 177 aa11.2□□□□□ -0.62
CLPX-204ENST00000559152 RAG1P15918 1043 aa11.2□□□□□ -0.62
CLPX-204ENST00000559152 ITGALP20701 1170 aa11.2□□□□□ -0.62
CLPX-204ENST00000559152 SERPINA4P29622 427 aa11.2□□□□□ -0.62
CLPX-204ENST00000559152 CDKN1CP49918 316 aaPredicted RBP11.2□□□□□ -0.62
CLPX-204ENST00000559152 ZXDBP98169 803 aa11.2□□□□□ -0.62
CLPX-204ENST00000559152 CYP4F8P98187 520 aa11.2□□□□□ -0.62
CLPX-204ENST00000559152 BLMHQ13867 455 aa11.2□□□□□ -0.62
CLPX-204ENST00000559152 FLOT2Q14254 428 aa11.2□□□□□ -0.62
CLPX-204ENST00000559152 GSTA3Q16772 222 aa11.2□□□□□ -0.62
CLPX-204ENST00000559152 RPS27LQ71UM5 84 aaKnown RBP11.2□□□□□ -0.62
CLPX-204ENST00000559152 GAREM2Q75VX8 874 aa11.2□□□□□ -0.62
CLPX-204ENST00000559152 RTL10Q7L3V2 364 aa11.2□□□□□ -0.62
CLPX-204ENST00000559152 LYSMD3Q7Z3D4 306 aa11.2□□□□□ -0.62
CLPX-204ENST00000559152 SNX20Q7Z614 316 aa11.2□□□□□ -0.62
CLPX-204ENST00000559152 TMC8Q8IU68 726 aa11.2□□□□□ -0.62
CLPX-204ENST00000559152 TMEM126BQ8IUX1 230 aa11.2□□□□□ -0.62
CLPX-204ENST00000559152 APCDD1Q8J025 514 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms