RNA–Protein interactions for RNA: ENST00000559061.5

SNX1-204, Transcript of sorting nexin 1, humanhuman

TSL 5

Gene SNX1, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-204ENST00000559061 TCEA2Q15560 299 aa11.35□□□□□ -0.59
SNX1-204ENST00000559061 CCDC70Q6NSX1 233 aa11.35□□□□□ -0.59
SNX1-204ENST00000559061 ADGRG6Q86SQ4 1221 aa11.35□□□□□ -0.59
SNX1-204ENST00000559061 NRROSQ86YC3 692 aa11.35□□□□□ -0.59
SNX1-204ENST00000559061 JAMLQ86YT9 394 aa11.35□□□□□ -0.59
SNX1-204ENST00000559061 NAXDQ8IW45 347 aa11.35□□□□□ -0.59
SNX1-204ENST00000559061 DEFB124Q8NES8 71 aa11.35□□□□□ -0.59
SNX1-204ENST00000559061 SPATA4Q8NEY3 305 aa11.35□□□□□ -0.59
SNX1-204ENST00000559061 OR56A4Q8NGH8 313 aa11.35□□□□□ -0.59
SNX1-204ENST00000559061 CCHCR1Q8TD31 782 aa11.35□□□□□ -0.59
SNX1-204ENST00000559061 DTX3LQ8TDB6 740 aa11.35□□□□□ -0.59
SNX1-204ENST00000559061 NAT14Q8WUY8 206 aa11.35□□□□□ -0.59
SNX1-204ENST00000559061 HIC2Q96JB3 615 aa11.35□□□□□ -0.59
SNX1-204ENST00000559061 SRPK1Q96SB4 655 aaKnown RBP11.35□□□□□ -0.59
SNX1-204ENST00000559061 SUDS3Q9H7L9 328 aaPredicted RBP11.35□□□□□ -0.59
SNX1-204ENST00000559061 UGT1A7Q9HAW7 530 aa11.35□□□□□ -0.59
SNX1-204ENST00000559061 UGT1A10Q9HAW8 530 aa11.35□□□□□ -0.59
SNX1-204ENST00000559061 UGT1A8Q9HAW9 530 aa11.35□□□□□ -0.59
SNX1-204ENST00000559061 SYBUQ9NX95 663 aa11.35□□□□□ -0.59
SNX1-204ENST00000559061 TOR4AQ9NXH8 423 aa11.35□□□□□ -0.59
SNX1-204ENST00000559061 KCTD5Q9NXV2 234 aa11.35□□□□□ -0.59
SNX1-204ENST00000559061 GOLGA6AQ9NYA3 693 aa11.35□□□□□ -0.59
SNX1-204ENST00000559061 CDV3Q9UKY7 258 aaKnown RBP11.35□□□□□ -0.59
SNX1-204ENST00000559061 ARHGEF17Q96PE2 2063 aaPredicted RBP11.35□□□□□ -0.59
SNX1-204ENST00000559061 DCDC2BA2VCK2 349 aa11.34□□□□□ -0.59
SNX1-204ENST00000559061 OR51F1A6NGY5 319 aa11.34□□□□□ -0.59
SNX1-204ENST00000559061 PRR19A6NJB7 356 aa11.34□□□□□ -0.59
SNX1-204ENST00000559061 CCDC188H7C350 402 aa11.34□□□□□ -0.59
SNX1-204ENST00000559061 CACNB4O00305 520 aaPredicted RBP11.34□□□□□ -0.59
SNX1-204ENST00000559061 TNFRSF10CO14798 259 aa11.34□□□□□ -0.59
SNX1-204ENST00000559061 SGTAO43765 313 aa11.34□□□□□ -0.59
SNX1-204ENST00000559061 IVLP07476 585 aa11.34□□□□□ -0.59
SNX1-204ENST00000559061 MYF5P13349 255 aa11.34□□□□□ -0.59
SNX1-204ENST00000559061 ARNTP27540 789 aa11.34□□□□□ -0.59
SNX1-204ENST00000559061 SPAM1P38567 509 aa11.34□□□□□ -0.59
SNX1-204ENST00000559061 THOP1P52888 689 aa11.34□□□□□ -0.59
SNX1-204ENST00000559061 ATXN3P54252 364 aaPredicted RBP11.34□□□□□ -0.59
SNX1-204ENST00000559061 TMPRSS15P98073 1019 aa11.34□□□□□ -0.59
SNX1-204ENST00000559061 B4GALNT1Q00973 533 aa11.34□□□□□ -0.59
SNX1-204ENST00000559061 ACVR1Q04771 509 aa11.34□□□□□ -0.59
SNX1-204ENST00000559061 CDH17Q12864 832 aa11.34□□□□□ -0.59
SNX1-204ENST00000559061 SLC14A1Q13336 389 aa11.34□□□□□ -0.59
SNX1-204ENST00000559061 C1orf61Q13536 156 aa11.34□□□□□ -0.59
SNX1-204ENST00000559061 LRRC8BQ6P9F7 803 aa11.34□□□□□ -0.59
SNX1-204ENST00000559061 DOK6Q6PKX4 331 aa11.34□□□□□ -0.59
SNX1-204ENST00000559061 C4orf22Q6V702 233 aa11.34□□□□□ -0.59
SNX1-204ENST00000559061 HID1Q8IV36 788 aa11.34□□□□□ -0.59
SNX1-204ENST00000559061 ZNF547Q8IVP9 402 aa11.34□□□□□ -0.59
SNX1-204ENST00000559061 OXR1Q8N573 874 aa11.34□□□□□ -0.59
SNX1-204ENST00000559061 BTN2A2Q8WVV5 523 aa11.34□□□□□ -0.59
SNX1-204ENST00000559061 GLYATL1Q969I3 302 aa11.34□□□□□ -0.59
SNX1-204ENST00000559061 SKA1Q96BD8 255 aa11.34□□□□□ -0.59
SNX1-204ENST00000559061 TBATAQ96M53 351 aa11.34□□□□□ -0.59
SNX1-204ENST00000559061 PWWP2AQ96N64 755 aa11.34□□□□□ -0.59
SNX1-204ENST00000559061 VPS35Q96QK1 796 aa11.34□□□□□ -0.59
SNX1-204ENST00000559061 RANBP9Q96S59 729 aa11.34□□□□□ -0.59
SNX1-204ENST00000559061 KRT12Q99456 494 aa11.34□□□□□ -0.59
SNX1-204ENST00000559061 ZSCAN5AQ9BUG6 496 aa11.34□□□□□ -0.59
SNX1-204ENST00000559061 SPATA16Q9BXB7 569 aa11.34□□□□□ -0.59
SNX1-204ENST00000559061 TMEM168Q9H0V1 697 aa11.34□□□□□ -0.59
SNX1-204ENST00000559061 PLAC1Q9HBJ0 212 aa11.34□□□□□ -0.59
SNX1-204ENST00000559061 PHPT1Q9NRX4 125 aaPredicted RBP11.34□□□□□ -0.59
SNX1-204ENST00000559061 TREX1Q9NSU2 369 aa11.34□□□□□ -0.59
SNX1-204ENST00000559061 NLE1Q9NVX2 485 aaPredicted RBP11.34□□□□□ -0.59
SNX1-204ENST00000559061 SMOXQ9NWM0 555 aa11.34□□□□□ -0.59
SNX1-204ENST00000559061 ATXN10Q9UBB4 475 aa11.34□□□□□ -0.59
SNX1-204ENST00000559061 RNF14Q9UBS8 474 aa11.34□□□□□ -0.59
SNX1-204ENST00000559061 KLQ9UEF7 1012 aa11.34□□□□□ -0.59
SNX1-204ENST00000559061 APOBEC3BQ9UH17 382 aaKnown RBP11.34□□□□□ -0.59
SNX1-204ENST00000559061 CDC23Q9UJX2 597 aa11.34□□□□□ -0.59
SNX1-204ENST00000559061 SUFUQ9UMX1 484 aa11.34□□□□□ -0.59
SNX1-204ENST00000559061 TCAF1Q9Y4C2 921 aa11.34□□□□□ -0.59
SNX1-204ENST00000559061 MRFAP1Q9Y605 127 aa11.34□□□□□ -0.59
SNX1-204ENST00000559061 TRBV5-4A0A0C4DH59 114 aa11.33□□□□□ -0.6
SNX1-204ENST00000559061 GLYATL1P3A0A0U1RQE8 302 aa11.33□□□□□ -0.6
SNX1-204ENST00000559061 BHMG1C9JSJ3 638 aaPredicted RBP11.33□□□□□ -0.6
SNX1-204ENST00000559061 E7EVH7 732 aa11.33□□□□□ -0.6
SNX1-204ENST00000559061 H7C0S8 307 aa11.33□□□□□ -0.6
SNX1-204ENST00000559061 DNALI1O14645 258 aaPredicted RBP11.33□□□□□ -0.6
SNX1-204ENST00000559061 CASC3O15234 703 aaKnown RBP11.33□□□□□ -0.6
SNX1-204ENST00000559061 STX7O15400 261 aaKnown RBP11.33□□□□□ -0.6
SNX1-204ENST00000559061 RAD51CO43502 376 aa11.33□□□□□ -0.6
SNX1-204ENST00000559061 DFNA5O60443 496 aa11.33□□□□□ -0.6
SNX1-204ENST00000559061 BANF1O75531 89 aa11.33□□□□□ -0.6
SNX1-204ENST00000559061 PRAMEF1O95521 474 aa11.33□□□□□ -0.6
SNX1-204ENST00000559061 ZNF8P17098 575 aaPredicted RBP11.33□□□□□ -0.6
SNX1-204ENST00000559061 MGAT1P26572 445 aa11.33□□□□□ -0.6
SNX1-204ENST00000559061 FOXN2P32314 431 aa11.33□□□□□ -0.6
SNX1-204ENST00000559061 ACTN2P35609 894 aa11.33□□□□□ -0.6
SNX1-204ENST00000559061 ARRB1P49407 418 aaPredicted RBP11.33□□□□□ -0.6
SNX1-204ENST00000559061 SESN2P58004 480 aaPredicted RBP11.33□□□□□ -0.6
SNX1-204ENST00000559061 DR1Q01658 176 aa11.33□□□□□ -0.6
SNX1-204ENST00000559061 PPARDQ03181 441 aa11.33□□□□□ -0.6
SNX1-204ENST00000559061 SEPT6Q14141 434 aa11.33□□□□□ -0.6
SNX1-204ENST00000559061 PTK2BQ14289 1009 aa11.33□□□□□ -0.6
SNX1-204ENST00000559061 SEMA3AQ14563 771 aa11.33□□□□□ -0.6
SNX1-204ENST00000559061 PROX2Q3B8N5 592 aa11.33□□□□□ -0.6
SNX1-204ENST00000559061 MSS51Q4VC12 460 aa11.33□□□□□ -0.6
SNX1-204ENST00000559061 PYCR3Q53H96 274 aa11.33□□□□□ -0.6
SNX1-204ENST00000559061 PRRT3Q5FWE3 981 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms