RNA–Protein interactions for RNA: ENST00000558936.5

RABGGTA-207, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 2

Gene RABGGTA, Length 648 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-207ENST00000558936 ATXN10Q9UBB4 475 aa12.55□□□□□ -0.4
RABGGTA-207ENST00000558936 SPASTQ9UBP0 616 aa12.55□□□□□ -0.4
RABGGTA-207ENST00000558936 GULP1Q9UBP9 304 aa12.55□□□□□ -0.4
RABGGTA-207ENST00000558936 NEU2Q9Y3R4 380 aa12.55□□□□□ -0.4
RABGGTA-207ENST00000558936 A0A1W2PQM1 296 aa12.54□□□□□ -0.4
RABGGTA-207ENST00000558936 A6NCN8 305 aa12.54□□□□□ -0.4
RABGGTA-207ENST00000558936 NEMP2A6NFY4 417 aa12.54□□□□□ -0.4
RABGGTA-207ENST00000558936 H3BM21 787 aa12.54□□□□□ -0.4
RABGGTA-207ENST00000558936 ZNF185O15231 689 aa12.54□□□□□ -0.4
RABGGTA-207ENST00000558936 RASGRP1O95267 797 aa12.54□□□□□ -0.4
RABGGTA-207ENST00000558936 SLC4A1P02730 911 aa12.54□□□□□ -0.4
RABGGTA-207ENST00000558936 IVLP07476 585 aa12.54□□□□□ -0.4
RABGGTA-207ENST00000558936 ZNF8P17098 575 aaPredicted RBP12.54□□□□□ -0.4
RABGGTA-207ENST00000558936 TPH1P17752 444 aa12.54□□□□□ -0.4
RABGGTA-207ENST00000558936 NFKBIAP25963 317 aa12.54□□□□□ -0.4
RABGGTA-207ENST00000558936 CDKN1CP49918 316 aaPredicted RBP12.54□□□□□ -0.4
RABGGTA-207ENST00000558936 DCDC1P59894 354 aa12.54□□□□□ -0.4
RABGGTA-207ENST00000558936 CTBSQ01459 385 aa12.54□□□□□ -0.4
RABGGTA-207ENST00000558936 PEX6Q13608 980 aa12.54□□□□□ -0.4
RABGGTA-207ENST00000558936 CHRNA6Q15825 494 aa12.54□□□□□ -0.4
RABGGTA-207ENST00000558936 DOK6Q6PKX4 331 aa12.54□□□□□ -0.4
RABGGTA-207ENST00000558936 MARK2Q7KZI7 788 aaKnown RBP12.54□□□□□ -0.4
RABGGTA-207ENST00000558936 ADGRG6Q86SQ4 1221 aa12.54□□□□□ -0.4
RABGGTA-207ENST00000558936 NAGSQ8N159 534 aa12.54□□□□□ -0.4
RABGGTA-207ENST00000558936 PDCD7Q8N8D1 485 aaKnown RBP12.54□□□□□ -0.4
RABGGTA-207ENST00000558936 OR13C4Q8NGS5 318 aa12.54□□□□□ -0.4
RABGGTA-207ENST00000558936 HIC2Q96JB3 615 aa12.54□□□□□ -0.4
RABGGTA-207ENST00000558936 SUDS3Q9H7L9 328 aaPredicted RBP12.54□□□□□ -0.4
RABGGTA-207ENST00000558936 CARS2Q9HA77 564 aaKnown RBP12.54□□□□□ -0.4
RABGGTA-207ENST00000558936 ETNK1Q9HBU6 452 aa12.54□□□□□ -0.4
RABGGTA-207ENST00000558936 HAUS2Q9NVX0 235 aa12.54□□□□□ -0.4
RABGGTA-207ENST00000558936 PIKFYVEQ9Y2I7 2098 aa12.53□□□□□ -0.4
RABGGTA-207ENST00000558936 TCRBV7S3A2A0A539 114 aa12.53□□□□□ -0.4
RABGGTA-207ENST00000558936 GOLGA6L6A8MZA4 724 aa12.53□□□□□ -0.4
RABGGTA-207ENST00000558936 CACNB4O00305 520 aaPredicted RBP12.53□□□□□ -0.4
RABGGTA-207ENST00000558936 RFPL3O75679 317 aa12.53□□□□□ -0.4
RABGGTA-207ENST00000558936 TNFP01375 233 aa12.53□□□□□ -0.4
RABGGTA-207ENST00000558936 FGGP02679 453 aa12.53□□□□□ -0.4
RABGGTA-207ENST00000558936 PSMA3P25788 255 aa12.53□□□□□ -0.4
RABGGTA-207ENST00000558936 HTR1BP28222 390 aa12.53□□□□□ -0.4
RABGGTA-207ENST00000558936 RPL22P35268 128 aaKnown RBP12.53□□□□□ -0.4
RABGGTA-207ENST00000558936 GNPDA1P46926 289 aa12.53□□□□□ -0.4
RABGGTA-207ENST00000558936 MAZP56270 477 aaKnown RBP12.53□□□□□ -0.4
RABGGTA-207ENST00000558936 B4GALNT1Q00973 533 aa12.53□□□□□ -0.4
RABGGTA-207ENST00000558936 CFHR1Q03591 330 aa12.53□□□□□ -0.4
RABGGTA-207ENST00000558936 HLTFQ14527 1009 aaKnown RBP eCLIP12.53□□□□□ -0.4
RABGGTA-207ENST00000558936 PARP6Q2NL67 630 aa12.53□□□□□ -0.4
RABGGTA-207ENST00000558936 CCDC181Q5TID7 509 aa12.53□□□□□ -0.4
RABGGTA-207ENST00000558936 ZCCHC8Q6NZY4 707 aaKnown RBP12.53□□□□□ -0.4
RABGGTA-207ENST00000558936 UNQ6494/PRO21346Q6UXR6 183 aa12.53□□□□□ -0.4
RABGGTA-207ENST00000558936 ZNF534Q76KX8 674 aa12.53□□□□□ -0.4
RABGGTA-207ENST00000558936 NDUFAF2Q8N183 169 aa12.53□□□□□ -0.4
RABGGTA-207ENST00000558936 C17orf53Q8N3J3 647 aaPredicted RBP12.53□□□□□ -0.4
RABGGTA-207ENST00000558936 BLOC1S5Q8TDH9 187 aa12.53□□□□□ -0.4
RABGGTA-207ENST00000558936 ZNF778Q96MU6 729 aa12.53□□□□□ -0.4
RABGGTA-207ENST00000558936 SLC13A1Q9BZW2 595 aa12.53□□□□□ -0.4
RABGGTA-207ENST00000558936 PHPT1Q9NRX4 125 aaPredicted RBP12.53□□□□□ -0.4
RABGGTA-207ENST00000558936 KCTD5Q9NXV2 234 aa12.53□□□□□ -0.4
RABGGTA-207ENST00000558936 SIRPGQ9P1W8 387 aa12.53□□□□□ -0.4
RABGGTA-207ENST00000558936 PCDHB1Q9Y5F3 818 aa12.53□□□□□ -0.4
RABGGTA-207ENST00000558936 PRAMEF33A0A0G2JMD5 474 aa12.52□□□□□ -0.41
RABGGTA-207ENST00000558936 RGSL1A5PLK6 1076 aa12.52□□□□□ -0.41
RABGGTA-207ENST00000558936 GOLGA6CA6NDK9 693 aa12.52□□□□□ -0.41
RABGGTA-207ENST00000558936 GOLGA6BA6NDN3 693 aa12.52□□□□□ -0.41
RABGGTA-207ENST00000558936 AGAP14A8MT82 685 aa12.52□□□□□ -0.41
RABGGTA-207ENST00000558936 CHUKO15111 745 aa12.52□□□□□ -0.41
RABGGTA-207ENST00000558936 PPM1DO15297 605 aa12.52□□□□□ -0.41
RABGGTA-207ENST00000558936 OPA1O60313 960 aa12.52□□□□□ -0.41
RABGGTA-207ENST00000558936 PROS1P07225 676 aa12.52□□□□□ -0.41
RABGGTA-207ENST00000558936 GOLGA6DP0CG33 693 aa12.52□□□□□ -0.41
RABGGTA-207ENST00000558936 ALPPL2P10696 532 aa12.52□□□□□ -0.41
RABGGTA-207ENST00000558936 HLA-DPA1P20036 260 aa12.52□□□□□ -0.41
RABGGTA-207ENST00000558936 CA4P22748 312 aa12.52□□□□□ -0.41
RABGGTA-207ENST00000558936 BLKP51451 505 aa12.52□□□□□ -0.41
RABGGTA-207ENST00000558936 ARSDP51689 593 aa12.52□□□□□ -0.41
RABGGTA-207ENST00000558936 ZNF140P52738 457 aaPredicted RBP12.52□□□□□ -0.41
RABGGTA-207ENST00000558936 CTSCP53634 463 aa12.52□□□□□ -0.41
RABGGTA-207ENST00000558936 GEMP55040 296 aa12.52□□□□□ -0.41
RABGGTA-207ENST00000558936 ILKQ13418 452 aa12.52□□□□□ -0.41
RABGGTA-207ENST00000558936 CCNG2Q16589 344 aa12.52□□□□□ -0.41
RABGGTA-207ENST00000558936 HES3Q5TGS1 186 aa12.52□□□□□ -0.41
RABGGTA-207ENST00000558936 DRICH1Q6PGQ1 229 aaPredicted RBP12.52□□□□□ -0.41
RABGGTA-207ENST00000558936 EFL1Q7Z2Z2 1120 aaKnown RBP12.52□□□□□ -0.41
RABGGTA-207ENST00000558936 TRAM1L1Q8N609 369 aa12.52□□□□□ -0.41
RABGGTA-207ENST00000558936 TTC13Q8NBP0 860 aa12.52□□□□□ -0.41
RABGGTA-207ENST00000558936 TRIM58Q8NG06 486 aa12.52□□□□□ -0.41
RABGGTA-207ENST00000558936 IFI44Q8TCB0 444 aa12.52□□□□□ -0.41
RABGGTA-207ENST00000558936 DUSP23Q9BVJ7 150 aa12.52□□□□□ -0.41
RABGGTA-207ENST00000558936 GPR63Q9BZJ6 419 aa12.52□□□□□ -0.41
RABGGTA-207ENST00000558936 TRNAU1APQ9NX07 287 aaKnown RBP12.52□□□□□ -0.41
RABGGTA-207ENST00000558936 GOLGA6AQ9NYA3 693 aa12.52□□□□□ -0.41
RABGGTA-207ENST00000558936 PKD2L2Q9NZM6 624 aa12.52□□□□□ -0.41
RABGGTA-207ENST00000558936 SCHIP1Q9P0W5 487 aaPredicted RBP12.52□□□□□ -0.41
RABGGTA-207ENST00000558936 TAAR2Q9P1P5 351 aa12.52□□□□□ -0.41
RABGGTA-207ENST00000558936 RNF215Q9Y6U7 377 aa12.52□□□□□ -0.41
RABGGTA-207ENST00000558936 NTN3O00634 580 aaPredicted RBP12.51□□□□□ -0.41
RABGGTA-207ENST00000558936 B4GAT1O43505 415 aa12.51□□□□□ -0.41
RABGGTA-207ENST00000558936 NUAK1O60285 661 aa12.51□□□□□ -0.41
RABGGTA-207ENST00000558936 CEP104O60308 925 aa12.51□□□□□ -0.41
RABGGTA-207ENST00000558936 AP2A1O95782 977 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms