RNA–Protein interactions for RNA: ENST00000558879.5

LRRC28-210, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4 BASIC

Gene LRRC28, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-210ENST00000558879 FAM83DQ9H4H8 585 aa16.88■□□□□ 0.29
LRRC28-210ENST00000558879 ZFYVE1Q9HBF4 777 aa16.88■□□□□ 0.29
LRRC28-210ENST00000558879 SEPT10Q9P0V9 454 aa16.88■□□□□ 0.29
LRRC28-210ENST00000558879 ACSL6Q9UKU0 697 aa16.88■□□□□ 0.29
LRRC28-210ENST00000558879 ZNF711Q9Y462 761 aa16.88■□□□□ 0.29
LRRC28-210ENST00000558879 PIKFYVEQ9Y2I7 2098 aa16.87■□□□□ 0.29
LRRC28-210ENST00000558879 RCCD1A6NED2 376 aa16.87■□□□□ 0.29
LRRC28-210ENST00000558879 B4GAT1O43505 415 aa16.87■□□□□ 0.29
LRRC28-210ENST00000558879 TNFSF15O95150 251 aa16.87■□□□□ 0.29
LRRC28-210ENST00000558879 NDUFA10O95299 355 aa16.87■□□□□ 0.29
LRRC28-210ENST00000558879 NDST3O95803 873 aa16.87■□□□□ 0.29
LRRC28-210ENST00000558879 ATP1A1P05023 1023 aaKnown RBP16.87■□□□□ 0.29
LRRC28-210ENST00000558879 UGT1A5P35504 534 aa16.87■□□□□ 0.29
LRRC28-210ENST00000558879 FASLGP48023 281 aa16.87■□□□□ 0.29
LRRC28-210ENST00000558879 PCSK7Q16549 785 aa16.87■□□□□ 0.29
LRRC28-210ENST00000558879 CLPPQ16740 277 aaPredicted RBP16.87■□□□□ 0.29
LRRC28-210ENST00000558879 KAZNQ674X7 775 aa16.87■□□□□ 0.29
LRRC28-210ENST00000558879 KDELC1Q6UW63 502 aa16.87■□□□□ 0.29
LRRC28-210ENST00000558879 MARK2Q7KZI7 788 aaKnown RBP16.87■□□□□ 0.29
LRRC28-210ENST00000558879 TMC3Q7Z5M5 1100 aa16.87■□□□□ 0.29
LRRC28-210ENST00000558879 GPR26Q8NDV2 337 aa16.87■□□□□ 0.29
LRRC28-210ENST00000558879 KRT35Q92764 455 aa16.87■□□□□ 0.29
LRRC28-210ENST00000558879 NAF1Q96HR8 494 aaKnown RBP16.87■□□□□ 0.29
LRRC28-210ENST00000558879 RBM41Q96IZ5 413 aaKnown RBP16.87■□□□□ 0.29
LRRC28-210ENST00000558879 QKIQ96PU8 341 aaKnown RBP eCLIP16.87■□□□□ 0.29
LRRC28-210ENST00000558879 UBL7Q96S82 380 aaPredicted RBP16.87■□□□□ 0.29
LRRC28-210ENST00000558879 RMI1Q9H9A7 625 aa16.87■□□□□ 0.29
LRRC28-210ENST00000558879 LUC7LQ9NQ29 371 aaKnown RBP16.87■□□□□ 0.29
LRRC28-210ENST00000558879 PCDHGA7Q9Y5G6 932 aa16.87■□□□□ 0.29
LRRC28-210ENST00000558879 ADGRG1Q9Y653 693 aa16.87■□□□□ 0.29
LRRC28-210ENST00000558879 SOWAHDA6NJG2 315 aa16.86■□□□□ 0.29
LRRC28-210ENST00000558879 MTSS1O43312 755 aa16.86■□□□□ 0.29
LRRC28-210ENST00000558879 ZRANB2O95218 330 aaKnown RBP eCLIP16.86■□□□□ 0.29
LRRC28-210ENST00000558879 CPNE6O95741 557 aa16.86■□□□□ 0.29
LRRC28-210ENST00000558879 PIRTP0C851 137 aa16.86■□□□□ 0.29
LRRC28-210ENST00000558879 CTNNA1P35221 906 aaKnown RBP16.86■□□□□ 0.29
LRRC28-210ENST00000558879 GPR3P46089 330 aa16.86■□□□□ 0.29
LRRC28-210ENST00000558879 UCNP55089 124 aa16.86■□□□□ 0.29
LRRC28-210ENST00000558879 LLGL1Q15334 1064 aa16.86■□□□□ 0.29
LRRC28-210ENST00000558879 SPA17Q15506 151 aa16.86■□□□□ 0.29
LRRC28-210ENST00000558879 MAP9Q49MG5 647 aa16.86■□□□□ 0.29
LRRC28-210ENST00000558879 PDPK2PQ6A1A2 396 aa16.86■□□□□ 0.29
LRRC28-210ENST00000558879 FOXR1Q6PIV2 292 aa16.86■□□□□ 0.29
LRRC28-210ENST00000558879 BBS12Q6ZW61 710 aa16.86■□□□□ 0.29
LRRC28-210ENST00000558879 SFRP1Q8N474 314 aa16.86■□□□□ 0.29
LRRC28-210ENST00000558879 FBXO39Q8N4B4 442 aa16.86■□□□□ 0.29
LRRC28-210ENST00000558879 TRAM1L1Q8N609 369 aa16.86■□□□□ 0.29
LRRC28-210ENST00000558879 P3H4Q92791 437 aa16.86■□□□□ 0.29
LRRC28-210ENST00000558879 TMEM159Q96B96 161 aa16.86■□□□□ 0.29
LRRC28-210ENST00000558879 REXO2Q9Y3B8 237 aaKnown RBP16.86■□□□□ 0.29
LRRC28-210ENST00000558879 LOXL2Q9Y4K0 774 aa16.86■□□□□ 0.29
LRRC28-210ENST00000558879 ATRXP46100 2492 aa16.86■□□□□ 0.29
LRRC28-210ENST00000558879 ATMQ13315 3056 aa16.85■□□□□ 0.29
LRRC28-210ENST00000558879 TEX51A0A1B0GUA7 166 aa16.85■□□□□ 0.29
LRRC28-210ENST00000558879 LOC285095A0A1B0GVY8 99 aa16.85■□□□□ 0.29
LRRC28-210ENST00000558879 A6NCN8 305 aa16.85■□□□□ 0.29
LRRC28-210ENST00000558879 RHPN2P1A8MT19 583 aa16.85■□□□□ 0.29
LRRC28-210ENST00000558879 BTNL10A8MVZ5 291 aa16.85■□□□□ 0.29
LRRC28-210ENST00000558879 APOC4-APOC2K7ER74 178 aa16.85■□□□□ 0.29
LRRC28-210ENST00000558879 PPM1DO15297 605 aa16.85■□□□□ 0.29
LRRC28-210ENST00000558879 ASMTLO95671 621 aa16.85■□□□□ 0.29
LRRC28-210ENST00000558879 EML2O95834 649 aa16.85■□□□□ 0.29
LRRC28-210ENST00000558879 APOC2P02655 101 aa16.85■□□□□ 0.29
LRRC28-210ENST00000558879 HGFP14210 728 aa16.85■□□□□ 0.29
LRRC28-210ENST00000558879 NFKB1P19838 968 aa16.85■□□□□ 0.29
LRRC28-210ENST00000558879 TMPRSS3P57727 454 aa16.85■□□□□ 0.29
LRRC28-210ENST00000558879 OR1D5P58170 312 aa16.85■□□□□ 0.29
LRRC28-210ENST00000558879 ZNF569Q5MCW4 686 aa16.85■□□□□ 0.29
LRRC28-210ENST00000558879 GPR155Q7Z3F1 870 aa16.85■□□□□ 0.29
LRRC28-210ENST00000558879 DAAM2Q86T65 1068 aa16.85■□□□□ 0.29
LRRC28-210ENST00000558879 RCOR2Q8IZ40 523 aa16.85■□□□□ 0.29
LRRC28-210ENST00000558879 SLC37A2Q8TED4 501 aa16.85■□□□□ 0.29
LRRC28-210ENST00000558879 SNRNP27Q8WVK2 155 aaKnown RBP16.85■□□□□ 0.29
LRRC28-210ENST00000558879 HAUS1Q96CS2 278 aa16.85■□□□□ 0.29
LRRC28-210ENST00000558879 CCDC97Q96F63 343 aaPredicted RBP16.85■□□□□ 0.29
LRRC28-210ENST00000558879 SRPK1Q96SB4 655 aaKnown RBP16.85■□□□□ 0.29
LRRC28-210ENST00000558879 VAT1Q99536 393 aa16.85■□□□□ 0.29
LRRC28-210ENST00000558879 NUDT22Q9BRQ3 303 aa16.85■□□□□ 0.29
LRRC28-210ENST00000558879 HERPUD2Q9BSE4 406 aa16.85■□□□□ 0.29
LRRC28-210ENST00000558879 ZSCAN5AQ9BUG6 496 aa16.85■□□□□ 0.29
LRRC28-210ENST00000558879 CARD9Q9H257 536 aa16.85■□□□□ 0.29
LRRC28-210ENST00000558879 SEMA6CQ9H3T2 930 aa16.85■□□□□ 0.29
LRRC28-210ENST00000558879 RDH14Q9HBH5 336 aa16.85■□□□□ 0.29
LRRC28-210ENST00000558879 SHOC2Q9UQ13 582 aa16.85■□□□□ 0.29
LRRC28-210ENST00000558879 SPO11Q9Y5K1 396 aa16.85■□□□□ 0.29
LRRC28-210ENST00000558879 EPN1Q9Y6I3 576 aaPredicted RBP16.85■□□□□ 0.29
LRRC28-210ENST00000558879 IGHV1OR21-1A0A087WYE8 117 aa16.84■□□□□ 0.29
LRRC28-210ENST00000558879 HACD1B0YJ81 288 aa16.84■□□□□ 0.29
LRRC28-210ENST00000558879 KLK10O43240 276 aa16.84■□□□□ 0.29
LRRC28-210ENST00000558879 NUAK1O60285 661 aa16.84■□□□□ 0.29
LRRC28-210ENST00000558879 PMPCBO75439 489 aa16.84■□□□□ 0.29
LRRC28-210ENST00000558879 BPIP17213 487 aa16.84■□□□□ 0.29
LRRC28-210ENST00000558879 ITIH1P19827 911 aa16.84■□□□□ 0.29
LRRC28-210ENST00000558879 CSF2RBP32927 897 aa16.84■□□□□ 0.29
LRRC28-210ENST00000558879 PTPN7P35236 360 aa16.84■□□□□ 0.29
LRRC28-210ENST00000558879 CXADRP78310 365 aa16.84■□□□□ 0.29
LRRC28-210ENST00000558879 CLN3Q13286 438 aa16.84■□□□□ 0.29
LRRC28-210ENST00000558879 SQSTM1Q13501 440 aa16.84■□□□□ 0.29
LRRC28-210ENST00000558879 C16orf72Q14CZ0 275 aa16.84■□□□□ 0.29
LRRC28-210ENST00000558879 NOMO1Q15155 1222 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms