RNA–Protein interactions for RNA: ENST00000558827.1

SMAD3-208, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 552 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-208ENST00000558827 RPL26L1Q9UNX3 145 aaKnown RBP12.43□□□□□ -0.42
SMAD3-208ENST00000558827 KCNK6Q9Y257 313 aa12.43□□□□□ -0.42
SMAD3-208ENST00000558827 ZNF711Q9Y462 761 aa12.43□□□□□ -0.42
SMAD3-208ENST00000558827 A0A087WV48 116 aa12.42□□□□□ -0.42
SMAD3-208ENST00000558827 RRP8O43159 456 aaKnown RBP12.42□□□□□ -0.42
SMAD3-208ENST00000558827 IPO7O95373 1038 aaKnown RBP12.42□□□□□ -0.42
SMAD3-208ENST00000558827 NDST3O95803 873 aa12.42□□□□□ -0.42
SMAD3-208ENST00000558827 ACP5P13686 325 aa12.42□□□□□ -0.42
SMAD3-208ENST00000558827 GLB1P16278 677 aa12.42□□□□□ -0.42
SMAD3-208ENST00000558827 MPSTP25325 297 aa12.42□□□□□ -0.42
SMAD3-208ENST00000558827 TEAD1P28347 426 aa12.42□□□□□ -0.42
SMAD3-208ENST00000558827 RBL1P28749 1068 aa12.42□□□□□ -0.42
SMAD3-208ENST00000558827 RBMS1P29558 406 aaKnown RBP12.42□□□□□ -0.42
SMAD3-208ENST00000558827 NR2C2P49116 596 aa12.42□□□□□ -0.42
SMAD3-208ENST00000558827 OLIG2Q13516 323 aa12.42□□□□□ -0.42
SMAD3-208ENST00000558827 PTPRCAPQ14761 206 aa12.42□□□□□ -0.42
SMAD3-208ENST00000558827 PLA2G4EQ3MJ16 856 aa12.42□□□□□ -0.42
SMAD3-208ENST00000558827 PHF19Q5T6S3 580 aa12.42□□□□□ -0.42
SMAD3-208ENST00000558827 CCDC70Q6NSX1 233 aa12.42□□□□□ -0.42
SMAD3-208ENST00000558827 C11orf63Q6NUN7 778 aa12.42□□□□□ -0.42
SMAD3-208ENST00000558827 CRTC3Q6UUV7 619 aa12.42□□□□□ -0.42
SMAD3-208ENST00000558827 KDELC1Q6UW63 502 aa12.42□□□□□ -0.42
SMAD3-208ENST00000558827 ZNF765Q7L2R6 523 aa12.42□□□□□ -0.42
SMAD3-208ENST00000558827 SPRED1Q7Z699 444 aa12.42□□□□□ -0.42
SMAD3-208ENST00000558827 JAMLQ86YT9 394 aa12.42□□□□□ -0.42
SMAD3-208ENST00000558827 GALNT13Q8IUC8 556 aa12.42□□□□□ -0.42
SMAD3-208ENST00000558827 NAGSQ8N159 534 aa12.42□□□□□ -0.42
SMAD3-208ENST00000558827 KIAA1524Q8TCG1 905 aa12.42□□□□□ -0.42
SMAD3-208ENST00000558827 PRR11Q96HE9 360 aaPredicted RBP12.42□□□□□ -0.42
SMAD3-208ENST00000558827 OXNAD1Q96HP4 312 aaPredicted RBP12.42□□□□□ -0.42
SMAD3-208ENST00000558827 COX14Q96I36 57 aa12.42□□□□□ -0.42
SMAD3-208ENST00000558827 RBM41Q96IZ5 413 aaKnown RBP12.42□□□□□ -0.42
SMAD3-208ENST00000558827 LYSMD1Q96S90 227 aa12.42□□□□□ -0.42
SMAD3-208ENST00000558827 BAG1Q99933 345 aaPredicted RBP12.42□□□□□ -0.42
SMAD3-208ENST00000558827 APOL2Q9BQE5 337 aa12.42□□□□□ -0.42
SMAD3-208ENST00000558827 OR2AG1Q9H205 316 aa12.42□□□□□ -0.42
SMAD3-208ENST00000558827 SEMA6CQ9H3T2 930 aa12.42□□□□□ -0.42
SMAD3-208ENST00000558827 ASCL3Q9NQ33 180 aa12.42□□□□□ -0.42
SMAD3-208ENST00000558827 TRNAU1APQ9NX07 287 aaKnown RBP12.42□□□□□ -0.42
SMAD3-208ENST00000558827 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.42□□□□□ -0.42
SMAD3-208ENST00000558827 ZFC3H1O60293 1989 aaKnown RBP12.41□□□□□ -0.42
SMAD3-208ENST00000558827 GRID2IPA4D2P6 1211 aa12.41□□□□□ -0.42
SMAD3-208ENST00000558827 D6RAR5 112 aa12.41□□□□□ -0.42
SMAD3-208ENST00000558827 PPM1DO15297 605 aa12.41□□□□□ -0.42
SMAD3-208ENST00000558827 TCEA3O75764 348 aa12.41□□□□□ -0.42
SMAD3-208ENST00000558827 FTCDO95954 541 aa12.41□□□□□ -0.42
SMAD3-208ENST00000558827 ZNF8P17098 575 aaPredicted RBP12.41□□□□□ -0.42
SMAD3-208ENST00000558827 FECHP22830 423 aa12.41□□□□□ -0.42
SMAD3-208ENST00000558827 INHBCP55103 352 aa12.41□□□□□ -0.42
SMAD3-208ENST00000558827 B4GALNT1Q00973 533 aa12.41□□□□□ -0.42
SMAD3-208ENST00000558827 OTUD4Q01804 1114 aaKnown RBP12.41□□□□□ -0.42
SMAD3-208ENST00000558827 SIRPB2Q5JXA9 342 aa12.41□□□□□ -0.42
SMAD3-208ENST00000558827 HENMT1Q5T8I9 393 aaKnown RBP12.41□□□□□ -0.42
SMAD3-208ENST00000558827 IGSF10Q6WRI0 2623 aa12.41□□□□□ -0.42
SMAD3-208ENST00000558827 BBS12Q6ZW61 710 aa12.41□□□□□ -0.42
SMAD3-208ENST00000558827 BZW1Q7L1Q6 419 aaKnown RBP12.41□□□□□ -0.42
SMAD3-208ENST00000558827 RAB11FIP2Q7L804 512 aa12.41□□□□□ -0.42
SMAD3-208ENST00000558827 TMC3Q7Z5M5 1100 aa12.41□□□□□ -0.42
SMAD3-208ENST00000558827 SPACA3Q8IXA5 215 aa12.41□□□□□ -0.42
SMAD3-208ENST00000558827 FBXO39Q8N4B4 442 aa12.41□□□□□ -0.42
SMAD3-208ENST00000558827 WDR36Q8NI36 951 aaKnown RBP12.41□□□□□ -0.42
SMAD3-208ENST00000558827 ACTL9Q8TC94 416 aa12.41□□□□□ -0.42
SMAD3-208ENST00000558827 HTR3CQ8WXA8 447 aa12.41□□□□□ -0.42
SMAD3-208ENST00000558827 ALG3Q92685 438 aa12.41□□□□□ -0.42
SMAD3-208ENST00000558827 TADA1Q96BN2 335 aa12.41□□□□□ -0.42
SMAD3-208ENST00000558827 QKIQ96PU8 341 aaKnown RBP eCLIP12.41□□□□□ -0.42
SMAD3-208ENST00000558827 NUDT22Q9BRQ3 303 aa12.41□□□□□ -0.42
SMAD3-208ENST00000558827 OSBPL8Q9BZF1 889 aa12.41□□□□□ -0.42
SMAD3-208ENST00000558827 CDH19Q9H159 772 aa12.41□□□□□ -0.42
SMAD3-208ENST00000558827 ATXN10Q9UBB4 475 aa12.41□□□□□ -0.42
SMAD3-208ENST00000558827 PISDQ9UG56 409 aa12.41□□□□□ -0.42
SMAD3-208ENST00000558827 FAM153AQ9UHL3 310 aa12.41□□□□□ -0.42
SMAD3-208ENST00000558827 RSPH14Q9UHP6 348 aa12.41□□□□□ -0.42
SMAD3-208ENST00000558827 DNPEPQ9ULA0 475 aa12.41□□□□□ -0.42
SMAD3-208ENST00000558827 PCDHA3Q9Y5H8 950 aa12.41□□□□□ -0.42
SMAD3-208ENST00000558827 CCDC187A0A096LP49 1063 aa12.4□□□□□ -0.42
SMAD3-208ENST00000558827 GPR39O43194 453 aa12.4□□□□□ -0.42
SMAD3-208ENST00000558827 KLK10O43240 276 aa12.4□□□□□ -0.42
SMAD3-208ENST00000558827 DNAJC6O75061 913 aa12.4□□□□□ -0.42
SMAD3-208ENST00000558827 SLC25A14O95258 325 aaPredicted RBP12.4□□□□□ -0.42
SMAD3-208ENST00000558827 AGTP01019 485 aa12.4□□□□□ -0.42
SMAD3-208ENST00000558827 PYGMP11217 842 aa12.4□□□□□ -0.42
SMAD3-208ENST00000558827 BPIP17213 487 aa12.4□□□□□ -0.42
SMAD3-208ENST00000558827 ITIH1P19827 911 aa12.4□□□□□ -0.42
SMAD3-208ENST00000558827 CA5AP35218 305 aa12.4□□□□□ -0.42
SMAD3-208ENST00000558827 CTNNA1P35221 906 aaKnown RBP12.4□□□□□ -0.42
SMAD3-208ENST00000558827 VAV2P52735 878 aa12.4□□□□□ -0.42
SMAD3-208ENST00000558827 MAPK10P53779 464 aa12.4□□□□□ -0.42
SMAD3-208ENST00000558827 EIF3EP60228 445 aaKnown RBP12.4□□□□□ -0.42
SMAD3-208ENST00000558827 MAP9Q49MG5 647 aa12.4□□□□□ -0.42
SMAD3-208ENST00000558827 DARS2Q6PI48 645 aaKnown RBP12.4□□□□□ -0.42
SMAD3-208ENST00000558827 MICALCLQ6ZW33 695 aa12.4□□□□□ -0.42
SMAD3-208ENST00000558827 NLRP8Q86W28 1048 aa12.4□□□□□ -0.42
SMAD3-208ENST00000558827 TMEM139Q8IV31 216 aa12.4□□□□□ -0.42
SMAD3-208ENST00000558827 TAB3Q8N5C8 712 aaPredicted RBP12.4□□□□□ -0.42
SMAD3-208ENST00000558827 RCBTB1Q8NDN9 531 aa12.4□□□□□ -0.42
SMAD3-208ENST00000558827 OR6C4Q8NGE1 309 aa12.4□□□□□ -0.42
SMAD3-208ENST00000558827 SNIP1Q8TAD8 396 aaKnown RBP12.4□□□□□ -0.42
SMAD3-208ENST00000558827 BLOC1S5Q8TDH9 187 aa12.4□□□□□ -0.42
SMAD3-208ENST00000558827 NAT14Q8WUY8 206 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms