RNA–Protein interactions for RNA: ENST00000558739.1

SMAD3-206, Transcript of SMAD family member 3, humanhuman

TSL 3

Gene SMAD3, Length 586 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-206ENST00000558739 RPS15P62841 145 aaKnown RBP11.73□□□□□ -0.53
SMAD3-206ENST00000558739 FKBP3Q00688 224 aaKnown RBP11.73□□□□□ -0.53
SMAD3-206ENST00000558739 GPS2Q13227 327 aa11.73□□□□□ -0.53
SMAD3-206ENST00000558739 TUBB3Q13509 450 aa11.73□□□□□ -0.53
SMAD3-206ENST00000558739 CDO1Q16878 200 aa11.73□□□□□ -0.53
SMAD3-206ENST00000558739 VWA5B1Q5TIE3 1220 aa11.73□□□□□ -0.53
SMAD3-206ENST00000558739 IYDQ6PHW0 289 aa11.73□□□□□ -0.53
SMAD3-206ENST00000558739 FAM92BQ6ZTR7 304 aa11.73□□□□□ -0.53
SMAD3-206ENST00000558739 Q6ZVL8 140 aa11.73□□□□□ -0.53
SMAD3-206ENST00000558739 TSPAN33Q86UF1 283 aa11.73□□□□□ -0.53
SMAD3-206ENST00000558739 HPS6Q86YV9 775 aa11.73□□□□□ -0.53
SMAD3-206ENST00000558739 GALNT13Q8IUC8 556 aa11.73□□□□□ -0.53
SMAD3-206ENST00000558739 PYROXD2Q8N2H3 581 aa11.73□□□□□ -0.53
SMAD3-206ENST00000558739 ZBTB2Q8N680 514 aa11.73□□□□□ -0.53
SMAD3-206ENST00000558739 ENDOVQ8N8Q3 282 aaKnown RBP11.73□□□□□ -0.53
SMAD3-206ENST00000558739 GLIS1Q8NBF1 620 aa11.73□□□□□ -0.53
SMAD3-206ENST00000558739 SLC38A9Q8NBW4 561 aa11.73□□□□□ -0.53
SMAD3-206ENST00000558739 TSEN2Q8NCE0 465 aaKnown RBP11.73□□□□□ -0.53
SMAD3-206ENST00000558739 CASKIN2Q8WXE0 1202 aa11.73□□□□□ -0.53
SMAD3-206ENST00000558739 SEC14L1Q92503 715 aa11.73□□□□□ -0.53
SMAD3-206ENST00000558739 CCDC47Q96A33 483 aaKnown RBP11.73□□□□□ -0.53
SMAD3-206ENST00000558739 TBC1D31Q96DN5 1066 aa11.73□□□□□ -0.53
SMAD3-206ENST00000558739 CHST8Q9H2A9 424 aa11.73□□□□□ -0.53
SMAD3-206ENST00000558739 LATS2Q9NRM7 1088 aa11.73□□□□□ -0.53
SMAD3-206ENST00000558739 SCHIP1Q9P0W5 487 aaPredicted RBP11.73□□□□□ -0.53
SMAD3-206ENST00000558739 CPNE7Q9UBL6 633 aa11.73□□□□□ -0.53
SMAD3-206ENST00000558739 PCDHGC3Q9UN70 934 aa11.73□□□□□ -0.53
SMAD3-206ENST00000558739 FARSAQ9Y285 508 aaKnown RBP11.73□□□□□ -0.53
SMAD3-206ENST00000558739 GTF3C3Q9Y5Q9 886 aa11.73□□□□□ -0.53
SMAD3-206ENST00000558739 LILRA5A6NI73 299 aa11.72□□□□□ -0.53
SMAD3-206ENST00000558739 C19orf84I3L1E1 186 aa11.72□□□□□ -0.53
SMAD3-206ENST00000558739 TRAFD1O14545 582 aaPredicted RBP11.72□□□□□ -0.53
SMAD3-206ENST00000558739 HEXIM1O94992 359 aaKnown RBP11.72□□□□□ -0.53
SMAD3-206ENST00000558739 MT-ND3P03897 115 aa11.72□□□□□ -0.53
SMAD3-206ENST00000558739 SERPINA4P29622 427 aa11.72□□□□□ -0.53
SMAD3-206ENST00000558739 ADRA1BP35368 520 aa11.72□□□□□ -0.53
SMAD3-206ENST00000558739 UBE2IP63279 158 aaKnown RBP11.72□□□□□ -0.53
SMAD3-206ENST00000558739 NRG1Q02297 640 aaPredicted RBP11.72□□□□□ -0.53
SMAD3-206ENST00000558739 ART3Q13508 389 aa11.72□□□□□ -0.53
SMAD3-206ENST00000558739 C15orf59Q2T9L4 293 aaPredicted RBP11.72□□□□□ -0.53
SMAD3-206ENST00000558739 ACBD5Q5T8D3 534 aaPredicted RBP11.72□□□□□ -0.53
SMAD3-206ENST00000558739 PRAMEF17Q5VTA0 474 aa11.72□□□□□ -0.53
SMAD3-206ENST00000558739 SRLQ86TD4 932 aa11.72□□□□□ -0.53
SMAD3-206ENST00000558739 GRHL3Q8TE85 626 aa11.72□□□□□ -0.53
SMAD3-206ENST00000558739 MR1Q95460 341 aa11.72□□□□□ -0.53
SMAD3-206ENST00000558739 SMIM14Q96QK8 99 aa11.72□□□□□ -0.53
SMAD3-206ENST00000558739 TUBGCP5Q96RT8 1024 aa11.72□□□□□ -0.53
SMAD3-206ENST00000558739 AGAP2Q99490 1192 aa11.72□□□□□ -0.53
SMAD3-206ENST00000558739 ATP13A3Q9H7F0 1226 aa11.72□□□□□ -0.53
SMAD3-206ENST00000558739 UBA2Q9UBT2 640 aaPredicted RBP11.72□□□□□ -0.53
SMAD3-206ENST00000558739 CNOT8Q9UFF9 292 aaKnown RBP11.72□□□□□ -0.53
SMAD3-206ENST00000558739 G3BP2Q9UN86 482 aaKnown RBP11.72□□□□□ -0.53
SMAD3-206ENST00000558739 KLF2Q9Y5W3 355 aaPredicted RBP11.72□□□□□ -0.53
SMAD3-206ENST00000558739 ZANQ9Y493 2812 aa11.71□□□□□ -0.53
SMAD3-206ENST00000558739 UBXN7O94888 489 aa11.71□□□□□ -0.53
SMAD3-206ENST00000558739 ATP1A1P05023 1023 aaKnown RBP11.71□□□□□ -0.53
SMAD3-206ENST00000558739 STSP08842 583 aa11.71□□□□□ -0.53
SMAD3-206ENST00000558739 EBLN1P0CF75 366 aa11.71□□□□□ -0.53
SMAD3-206ENST00000558739 ACP5P13686 325 aa11.71□□□□□ -0.53
SMAD3-206ENST00000558739 BPIP17213 487 aa11.71□□□□□ -0.53
SMAD3-206ENST00000558739 SYKP43405 635 aa11.71□□□□□ -0.53
SMAD3-206ENST00000558739 HDAC4P56524 1084 aa11.71□□□□□ -0.53
SMAD3-206ENST00000558739 PEX6Q13608 980 aa11.71□□□□□ -0.53
SMAD3-206ENST00000558739 ZNF630Q2M218 657 aaPredicted RBP11.71□□□□□ -0.53
SMAD3-206ENST00000558739 CACHD1Q5VU97 1274 aa11.71□□□□□ -0.53
SMAD3-206ENST00000558739 BNC2Q6ZN30 1099 aaPredicted RBP11.71□□□□□ -0.53
SMAD3-206ENST00000558739 CHST15Q7LFX5 561 aaPredicted RBP11.71□□□□□ -0.53
SMAD3-206ENST00000558739 PRSS42Q7Z5A4 293 aa11.71□□□□□ -0.53
SMAD3-206ENST00000558739 PAF1Q8N7H5 531 aa11.71□□□□□ -0.53
SMAD3-206ENST00000558739 RTL3Q8N8U3 475 aaKnown RBP11.71□□□□□ -0.53
SMAD3-206ENST00000558739 SCAMP4Q969E2 229 aa11.71□□□□□ -0.53
SMAD3-206ENST00000558739 TSG101Q99816 390 aa11.71□□□□□ -0.53
SMAD3-206ENST00000558739 TMEM59LQ9UK28 342 aa11.71□□□□□ -0.53
SMAD3-206ENST00000558739 SNX7Q9UNH6 387 aa11.71□□□□□ -0.53
SMAD3-206ENST00000558739 IGHV5-51A0A0C4DH38 117 aa11.7□□□□□ -0.54
SMAD3-206ENST00000558739 NPIPB15A6NHN6 443 aaPredicted RBP11.7□□□□□ -0.54
SMAD3-206ENST00000558739 DNAJC6O75061 913 aa11.7□□□□□ -0.54
SMAD3-206ENST00000558739 F3P13726 295 aa11.7□□□□□ -0.54
SMAD3-206ENST00000558739 NELFEP18615 380 aaKnown RBP11.7□□□□□ -0.54
SMAD3-206ENST00000558739 GPR1P46091 355 aa11.7□□□□□ -0.54
SMAD3-206ENST00000558739 CAPZBP47756 277 aa11.7□□□□□ -0.54
SMAD3-206ENST00000558739 VAV2P52735 878 aa11.7□□□□□ -0.54
SMAD3-206ENST00000558739 LRP8Q14114 963 aa11.7□□□□□ -0.54
SMAD3-206ENST00000558739 GRM3Q14832 879 aa11.7□□□□□ -0.54
SMAD3-206ENST00000558739 CCDC40Q4G0X9 1142 aa11.7□□□□□ -0.54
SMAD3-206ENST00000558739 LYPLAL1Q5VWZ2 237 aa11.7□□□□□ -0.54
SMAD3-206ENST00000558739 Q6ZS92 163 aa11.7□□□□□ -0.54
SMAD3-206ENST00000558739 SLC9B2Q86UD5 537 aa11.7□□□□□ -0.54
SMAD3-206ENST00000558739 ARFGAP1Q8N6T3 406 aa11.7□□□□□ -0.54
SMAD3-206ENST00000558739 KLHL6Q8WZ60 621 aa11.7□□□□□ -0.54
SMAD3-206ENST00000558739 CELF6Q96J87 481 aaKnown RBP11.7□□□□□ -0.54
SMAD3-206ENST00000558739 PLEKHG4BQ96PX9 1271 aa11.7□□□□□ -0.54
SMAD3-206ENST00000558739 CRACR2AQ9BSW2 395 aa11.7□□□□□ -0.54
SMAD3-206ENST00000558739 MLPHQ9BV36 600 aaPredicted RBP11.7□□□□□ -0.54
SMAD3-206ENST00000558739 GOLPH3LQ9H4A5 285 aa11.7□□□□□ -0.54
SMAD3-206ENST00000558739 EPB41L1Q9H4G0 881 aa11.7□□□□□ -0.54
SMAD3-206ENST00000558739 GSX1Q9H4S2 264 aaPredicted RBP11.7□□□□□ -0.54
SMAD3-206ENST00000558739 STN1Q9H668 368 aaKnown RBP11.7□□□□□ -0.54
SMAD3-206ENST00000558739 AGPAT4Q9NRZ5 378 aa11.7□□□□□ -0.54
SMAD3-206ENST00000558739 ZNHIT2Q9UHR6 403 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms