RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 LEF1Q9UJU2 399 aaPredicted RBP11.77□□□□□ -0.53
VIPAS39-211ENST00000557658 DOLKQ9UPQ8 538 aa11.77□□□□□ -0.53
VIPAS39-211ENST00000557658 PLXNB2O15031 1838 aa11.77□□□□□ -0.53
VIPAS39-211ENST00000557658 COL4A4P53420 1690 aaPredicted RBP11.77□□□□□ -0.53
VIPAS39-211ENST00000557658 BPTFQ12830 3046 aa11.77□□□□□ -0.53
VIPAS39-211ENST00000557658 MROH6A6NGR9 719 aa11.76□□□□□ -0.53
VIPAS39-211ENST00000557658 CFAP99D6REC4 459 aa11.76□□□□□ -0.53
VIPAS39-211ENST00000557658 EEDO75530 441 aaKnown RBP11.76□□□□□ -0.53
VIPAS39-211ENST00000557658 SEC14L2O76054 403 aa11.76□□□□□ -0.53
VIPAS39-211ENST00000557658 FUCA1P04066 466 aa11.76□□□□□ -0.53
VIPAS39-211ENST00000557658 SLC2A3P11169 496 aa11.76□□□□□ -0.53
VIPAS39-211ENST00000557658 HTR1EP28566 365 aa11.76□□□□□ -0.53
VIPAS39-211ENST00000557658 POLR2IP36954 125 aaKnown RBP11.76□□□□□ -0.53
VIPAS39-211ENST00000557658 CD86P42081 329 aa11.76□□□□□ -0.53
VIPAS39-211ENST00000557658 RENBPP51606 427 aa11.76□□□□□ -0.53
VIPAS39-211ENST00000557658 DIO3P55073 304 aa11.76□□□□□ -0.53
VIPAS39-211ENST00000557658 LCP2Q13094 533 aa11.76□□□□□ -0.53
VIPAS39-211ENST00000557658 EIF4EBP2Q13542 120 aaPredicted RBP11.76□□□□□ -0.53
VIPAS39-211ENST00000557658 RCAN2Q14206 197 aa11.76□□□□□ -0.53
VIPAS39-211ENST00000557658 OR4D1Q15615 310 aa11.76□□□□□ -0.53
VIPAS39-211ENST00000557658 RGS21Q2M5E4 152 aa11.76□□□□□ -0.53
VIPAS39-211ENST00000557658 NIPAL1Q6NVV3 410 aa11.76□□□□□ -0.53
VIPAS39-211ENST00000557658 BEND5Q7L4P6 421 aa11.76□□□□□ -0.53
VIPAS39-211ENST00000557658 SH3RF2Q8TEC5 729 aa11.76□□□□□ -0.53
VIPAS39-211ENST00000557658 RPL10LQ96L21 214 aaKnown RBP11.76□□□□□ -0.53
VIPAS39-211ENST00000557658 CHID1Q9BWS9 393 aa11.76□□□□□ -0.53
VIPAS39-211ENST00000557658 OSER1Q9NX31 292 aa11.76□□□□□ -0.53
VIPAS39-211ENST00000557658 B3GNT3Q9Y2A9 372 aa11.76□□□□□ -0.53
VIPAS39-211ENST00000557658 WDR37Q9Y2I8 494 aa11.76□□□□□ -0.53
VIPAS39-211ENST00000557658 MRPL42Q9Y6G3 142 aaKnown RBP11.76□□□□□ -0.53
VIPAS39-211ENST00000557658 ANKRD12Q6UB98 2062 aa11.76□□□□□ -0.53
VIPAS39-211ENST00000557658 OR51F1A6NGY5 319 aa11.76□□□□□ -0.53
VIPAS39-211ENST00000557658 CCDC154A6NI56 674 aa11.76□□□□□ -0.53
VIPAS39-211ENST00000557658 J3QRK9 145 aa11.76□□□□□ -0.53
VIPAS39-211ENST00000557658 SULT1C4O75897 302 aa11.76□□□□□ -0.53
VIPAS39-211ENST00000557658 MT-ND1P03886 318 aa11.76□□□□□ -0.53
VIPAS39-211ENST00000557658 CYBBP04839 570 aa11.76□□□□□ -0.53
VIPAS39-211ENST00000557658 MRPL19P49406 292 aaKnown RBP11.76□□□□□ -0.53
VIPAS39-211ENST00000557658 MAPK10P53779 464 aa11.76□□□□□ -0.53
VIPAS39-211ENST00000557658 CLCQ05315 142 aa11.76□□□□□ -0.53
VIPAS39-211ENST00000557658 ZNF467Q7Z7K2 595 aaPredicted RBP11.76□□□□□ -0.53
VIPAS39-211ENST00000557658 SLC15A4Q8N697 577 aa11.76□□□□□ -0.53
VIPAS39-211ENST00000557658 GPRC5AQ8NFJ5 357 aa11.76□□□□□ -0.53
VIPAS39-211ENST00000557658 DCPSQ96C86 337 aaKnown RBP11.76□□□□□ -0.53
VIPAS39-211ENST00000557658 FBXL8Q96CD0 374 aa11.76□□□□□ -0.53
VIPAS39-211ENST00000557658 MAGED4Q96JG8 741 aa11.76□□□□□ -0.53
VIPAS39-211ENST00000557658 GLT1D1Q96MS3 346 aa11.76□□□□□ -0.53
VIPAS39-211ENST00000557658 RNF145Q96MT1 663 aa11.76□□□□□ -0.53
VIPAS39-211ENST00000557658 MUS81Q96NY9 551 aa11.76□□□□□ -0.53
VIPAS39-211ENST00000557658 TFB2MQ9H5Q4 396 aaKnown RBP11.76□□□□□ -0.53
VIPAS39-211ENST00000557658 GPN2Q9H9Y4 310 aaPredicted RBP11.76□□□□□ -0.53
VIPAS39-211ENST00000557658 POPDC3Q9HBV1 291 aa11.76□□□□□ -0.53
VIPAS39-211ENST00000557658 AIG1Q9NVV5 245 aa11.76□□□□□ -0.53
VIPAS39-211ENST00000557658 PSME2Q9UL46 239 aa11.76□□□□□ -0.53
VIPAS39-211ENST00000557658 ASPDHA6ND91 283 aa11.75□□□□□ -0.53
VIPAS39-211ENST00000557658 E9PAM4 449 aa11.75□□□□□ -0.53
VIPAS39-211ENST00000557658 ABCB7O75027 752 aa11.75□□□□□ -0.53
VIPAS39-211ENST00000557658 CLPXO76031 633 aa11.75□□□□□ -0.53
VIPAS39-211ENST00000557658 GLP2RO95838 553 aa11.75□□□□□ -0.53
VIPAS39-211ENST00000557658 MTHFD2P13995 350 aa11.75□□□□□ -0.53
VIPAS39-211ENST00000557658 ZNF37AP17032 561 aaPredicted RBP11.75□□□□□ -0.53
VIPAS39-211ENST00000557658 ELK4P28324 431 aa11.75□□□□□ -0.53
VIPAS39-211ENST00000557658 SOX11P35716 441 aa11.75□□□□□ -0.53
VIPAS39-211ENST00000557658 CASP2P42575 452 aa11.75□□□□□ -0.53
VIPAS39-211ENST00000557658 PAGE3Q5JUK9 113 aa11.75□□□□□ -0.53
VIPAS39-211ENST00000557658 OTUD3Q5T2D3 398 aaPredicted RBP11.75□□□□□ -0.53
VIPAS39-211ENST00000557658 GALNT18Q6P9A2 607 aa11.75□□□□□ -0.53
VIPAS39-211ENST00000557658 ZNF549Q6P9A3 640 aa11.75□□□□□ -0.53
VIPAS39-211ENST00000557658 TBPL2Q6SJ96 375 aa11.75□□□□□ -0.53
VIPAS39-211ENST00000557658 GPC2Q8N158 579 aa11.75□□□□□ -0.53
VIPAS39-211ENST00000557658 TMEM199Q8N511 208 aa11.75□□□□□ -0.53
VIPAS39-211ENST00000557658 BPIFB1Q8TDL5 484 aa11.75□□□□□ -0.53
VIPAS39-211ENST00000557658 SNX19Q92543 992 aa11.75□□□□□ -0.53
VIPAS39-211ENST00000557658 PABPC5Q96DU9 382 aaKnown RBP11.75□□□□□ -0.53
VIPAS39-211ENST00000557658 NSMCE2Q96MF7 247 aa11.75□□□□□ -0.53
VIPAS39-211ENST00000557658 ATOH8Q96SQ7 321 aa11.75□□□□□ -0.53
VIPAS39-211ENST00000557658 MPP6Q9NZW5 540 aa11.75□□□□□ -0.53
VIPAS39-211ENST00000557658 SUN2Q9UH99 717 aa11.75□□□□□ -0.53
VIPAS39-211ENST00000557658 ERGIC3Q9Y282 383 aa11.75□□□□□ -0.53
VIPAS39-211ENST00000557658 V9GYQ6 96 aa11.75□□□□□ -0.53
VIPAS39-211ENST00000557658 DEAF1O75398 565 aaPredicted RBP11.75□□□□□ -0.53
VIPAS39-211ENST00000557658 SLC22A3O75751 556 aa11.75□□□□□ -0.53
VIPAS39-211ENST00000557658 CDH1P12830 882 aa11.75□□□□□ -0.53
VIPAS39-211ENST00000557658 CDH3P22223 829 aa11.75□□□□□ -0.53
VIPAS39-211ENST00000557658 EEF1DP29692 281 aaKnown RBP11.75□□□□□ -0.53
VIPAS39-211ENST00000557658 ALDH3A2P51648 485 aa11.75□□□□□ -0.53
VIPAS39-211ENST00000557658 SUOXP51687 545 aa11.75□□□□□ -0.53
VIPAS39-211ENST00000557658 CLCNKBP51801 687 aa11.75□□□□□ -0.53
VIPAS39-211ENST00000557658 ARSFP54793 590 aa11.75□□□□□ -0.53
VIPAS39-211ENST00000557658 MAXP61244 160 aa11.75□□□□□ -0.53
VIPAS39-211ENST00000557658 DAG1Q14118 895 aa11.75□□□□□ -0.53
VIPAS39-211ENST00000557658 ZIK1Q3SY52 487 aaPredicted RBP11.75□□□□□ -0.53
VIPAS39-211ENST00000557658 RBM48Q5RL73 367 aaKnown RBP11.75□□□□□ -0.53
VIPAS39-211ENST00000557658 MRNIPQ6NTE8 343 aa11.75□□□□□ -0.53
VIPAS39-211ENST00000557658 TAF2Q6P1X5 1199 aa11.75□□□□□ -0.53
VIPAS39-211ENST00000557658 NCCRP1Q6ZVX7 275 aaPredicted RBP11.75□□□□□ -0.53
VIPAS39-211ENST00000557658 EFL1Q7Z2Z2 1120 aaKnown RBP11.75□□□□□ -0.53
VIPAS39-211ENST00000557658 KIAA2013Q8IYS2 634 aa11.75□□□□□ -0.53
VIPAS39-211ENST00000557658 TMEM74Q96NL1 305 aa11.75□□□□□ -0.53
VIPAS39-211ENST00000557658 NANOGQ9H9S0 305 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms