RNA–Protein interactions for RNA: ENST00000557623.5

SLIRP-211, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2 BASIC

Gene SLIRP, Length 865 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-211ENST00000557623 YY2O15391 372 aa12.41□□□□□ -0.42
SLIRP-211ENST00000557623 PPFIA2O75334 1257 aa12.41□□□□□ -0.42
SLIRP-211ENST00000557623 FGGP02679 453 aa12.41□□□□□ -0.42
SLIRP-211ENST00000557623 CKMT1AP12532 417 aa12.41□□□□□ -0.42
SLIRP-211ENST00000557623 GCGRP47871 477 aa12.41□□□□□ -0.42
SLIRP-211ENST00000557623 GDF10P55107 478 aa12.41□□□□□ -0.42
SLIRP-211ENST00000557623 PDE1BQ01064 536 aa12.41□□□□□ -0.42
SLIRP-211ENST00000557623 E2F1Q01094 437 aa12.41□□□□□ -0.42
SLIRP-211ENST00000557623 SNX1Q13596 522 aa12.41□□□□□ -0.42
SLIRP-211ENST00000557623 PEX6Q13608 980 aa12.41□□□□□ -0.42
SLIRP-211ENST00000557623 NR0B2Q15466 257 aa12.41□□□□□ -0.42
SLIRP-211ENST00000557623 LONRF2Q1L5Z9 754 aa12.41□□□□□ -0.42
SLIRP-211ENST00000557623 GALNT15Q8N3T1 639 aa12.41□□□□□ -0.42
SLIRP-211ENST00000557623 GPR26Q8NDV2 337 aa12.41□□□□□ -0.42
SLIRP-211ENST00000557623 COX14Q96I36 57 aa12.41□□□□□ -0.42
SLIRP-211ENST00000557623 TBL1YQ9BQ87 522 aa12.41□□□□□ -0.42
SLIRP-211ENST00000557623 BOCQ9BWV1 1114 aa12.41□□□□□ -0.42
SLIRP-211ENST00000557623 CAAP1Q9H8G2 361 aa12.41□□□□□ -0.42
SLIRP-211ENST00000557623 LRRC40Q9H9A6 602 aa12.41□□□□□ -0.42
SLIRP-211ENST00000557623 RMI1Q9H9A7 625 aa12.41□□□□□ -0.42
SLIRP-211ENST00000557623 CARS2Q9HA77 564 aaKnown RBP12.41□□□□□ -0.42
SLIRP-211ENST00000557623 TRNAU1APQ9NX07 287 aaKnown RBP12.41□□□□□ -0.42
SLIRP-211ENST00000557623 TRMT1Q9NXH9 659 aaKnown RBP12.41□□□□□ -0.42
SLIRP-211ENST00000557623 VPS18Q9P253 973 aa12.41□□□□□ -0.42
SLIRP-211ENST00000557623 DRG1Q9Y295 367 aaKnown RBP12.41□□□□□ -0.42
SLIRP-211ENST00000557623 PKP3Q9Y446 797 aa12.41□□□□□ -0.42
SLIRP-211ENST00000557623 C2orf81A6NN90 581 aa12.4□□□□□ -0.42
SLIRP-211ENST00000557623 ERI2A8K979 691 aaKnown RBP12.4□□□□□ -0.42
SLIRP-211ENST00000557623 FADS2P1A8MWK0 482 aa12.4□□□□□ -0.42
SLIRP-211ENST00000557623 AURKAO14965 403 aa12.4□□□□□ -0.42
SLIRP-211ENST00000557623 HYAL3O43820 417 aaPredicted RBP12.4□□□□□ -0.42
SLIRP-211ENST00000557623 METTL18O95568 372 aa12.4□□□□□ -0.42
SLIRP-211ENST00000557623 ASMTLO95671 621 aa12.4□□□□□ -0.42
SLIRP-211ENST00000557623 CRTAMO95727 393 aa12.4□□□□□ -0.42
SLIRP-211ENST00000557623 GP1BAP07359 652 aa12.4□□□□□ -0.42
SLIRP-211ENST00000557623 CD46P15529 392 aa12.4□□□□□ -0.42
SLIRP-211ENST00000557623 BPIP17213 487 aa12.4□□□□□ -0.42
SLIRP-211ENST00000557623 CXCR5P32302 372 aa12.4□□□□□ -0.42
SLIRP-211ENST00000557623 FDFT1P37268 417 aa12.4□□□□□ -0.42
SLIRP-211ENST00000557623 SPAM1P38567 509 aa12.4□□□□□ -0.42
SLIRP-211ENST00000557623 GNPDA1P46926 289 aa12.4□□□□□ -0.42
SLIRP-211ENST00000557623 CCDC173Q0VFZ6 552 aa12.4□□□□□ -0.42
SLIRP-211ENST00000557623 ILF3Q12906 894 aaKnown RBP eCLIP12.4□□□□□ -0.42
SLIRP-211ENST00000557623 SIX1Q15475 284 aaPredicted RBP12.4□□□□□ -0.42
SLIRP-211ENST00000557623 TAF1AQ15573 450 aaPredicted RBP12.4□□□□□ -0.42
SLIRP-211ENST00000557623 CCDC157Q569K6 752 aa12.4□□□□□ -0.42
SLIRP-211ENST00000557623 ALS2CLQ60I27 953 aa12.4□□□□□ -0.42
SLIRP-211ENST00000557623 KCTD11Q693B1 232 aa12.4□□□□□ -0.42
SLIRP-211ENST00000557623 DOK6Q6PKX4 331 aa12.4□□□□□ -0.42
SLIRP-211ENST00000557623 C4orf22Q6V702 233 aa12.4□□□□□ -0.42
SLIRP-211ENST00000557623 TAF8Q7Z7C8 310 aa12.4□□□□□ -0.42
SLIRP-211ENST00000557623 LINC00523Q86TU6 105 aa12.4□□□□□ -0.42
SLIRP-211ENST00000557623 SLC35F6Q8N357 371 aa12.4□□□□□ -0.42
SLIRP-211ENST00000557623 TTC30BQ8N4P2 665 aa12.4□□□□□ -0.42
SLIRP-211ENST00000557623 CHCHD4Q8N4Q1 142 aa12.4□□□□□ -0.42
SLIRP-211ENST00000557623 CCDC89Q8N998 374 aa12.4□□□□□ -0.42
SLIRP-211ENST00000557623 DTX3LQ8TDB6 740 aa12.4□□□□□ -0.42
SLIRP-211ENST00000557623 BRSK1Q8TDC3 778 aa12.4□□□□□ -0.42
SLIRP-211ENST00000557623 SCARF2Q96GP6 870 aaPredicted RBP12.4□□□□□ -0.42
SLIRP-211ENST00000557623 NAP1L3Q99457 506 aaPredicted RBP12.4□□□□□ -0.42
SLIRP-211ENST00000557623 SCNM1Q9BWG6 230 aa12.4□□□□□ -0.42
SLIRP-211ENST00000557623 GSDMCQ9BYG8 508 aa12.4□□□□□ -0.42
SLIRP-211ENST00000557623 TMEM168Q9H0V1 697 aa12.4□□□□□ -0.42
SLIRP-211ENST00000557623 ARNT2Q9HBZ2 717 aa12.4□□□□□ -0.42
SLIRP-211ENST00000557623 BPIFA1Q9NP55 256 aa12.4□□□□□ -0.42
SLIRP-211ENST00000557623 PAK5Q9P286 719 aa12.4□□□□□ -0.42
SLIRP-211ENST00000557623 CNOT6Q9ULM6 557 aaKnown RBP12.4□□□□□ -0.42
SLIRP-211ENST00000557623 SUFUQ9UMX1 484 aa12.4□□□□□ -0.42
SLIRP-211ENST00000557623 WASF3Q9UPY6 502 aa12.4□□□□□ -0.42
SLIRP-211ENST00000557623 NEUROG3Q9Y4Z2 214 aa12.4□□□□□ -0.42
SLIRP-211ENST00000557623 ARHGEF17Q96PE2 2063 aaPredicted RBP12.4□□□□□ -0.42
SLIRP-211ENST00000557623 PLXNB3Q9ULL4 1909 aa12.4□□□□□ -0.42
SLIRP-211ENST00000557623 FAM221BA6H8Z2 402 aa12.39□□□□□ -0.43
SLIRP-211ENST00000557623 GPR89AB7ZAQ6 455 aa12.39□□□□□ -0.43
SLIRP-211ENST00000557623 STX7O15400 261 aaKnown RBP12.39□□□□□ -0.43
SLIRP-211ENST00000557623 SLC25A14O95258 325 aaPredicted RBP12.39□□□□□ -0.43
SLIRP-211ENST00000557623 AP2A1O95782 977 aa12.39□□□□□ -0.43
SLIRP-211ENST00000557623 IFNB1P01574 187 aa12.39□□□□□ -0.43
SLIRP-211ENST00000557623 CELA2BP08218 269 aaPredicted RBP12.39□□□□□ -0.43
SLIRP-211ENST00000557623 GPR89BP0CG08 455 aa12.39□□□□□ -0.43
SLIRP-211ENST00000557623 LPOP22079 712 aaPredicted RBP12.39□□□□□ -0.43
SLIRP-211ENST00000557623 POLD2P49005 469 aa12.39□□□□□ -0.43
SLIRP-211ENST00000557623 KCTD16Q68DU8 428 aa12.39□□□□□ -0.43
SLIRP-211ENST00000557623 BLOC1S3Q6QNY0 202 aa12.39□□□□□ -0.43
SLIRP-211ENST00000557623 DHRS13Q6UX07 377 aa12.39□□□□□ -0.43
SLIRP-211ENST00000557623 TMPRSS7Q7RTY8 843 aa12.39□□□□□ -0.43
SLIRP-211ENST00000557623 GALNT13Q8IUC8 556 aa12.39□□□□□ -0.43
SLIRP-211ENST00000557623 PHYKPLQ8IUZ5 450 aa12.39□□□□□ -0.43
SLIRP-211ENST00000557623 RASGEF1CQ8N431 466 aa12.39□□□□□ -0.43
SLIRP-211ENST00000557623 ARL10Q8N8L6 244 aa12.39□□□□□ -0.43
SLIRP-211ENST00000557623 FAM46DQ8NEK8 389 aa12.39□□□□□ -0.43
SLIRP-211ENST00000557623 OR6C4Q8NGE1 309 aa12.39□□□□□ -0.43
SLIRP-211ENST00000557623 GPBAR1Q8TDU6 330 aa12.39□□□□□ -0.43
SLIRP-211ENST00000557623 NAT6Q93015 286 aa12.39□□□□□ -0.43
SLIRP-211ENST00000557623 GLYATL1Q969I3 302 aa12.39□□□□□ -0.43
SLIRP-211ENST00000557623 VPS35Q96QK1 796 aa12.39□□□□□ -0.43
SLIRP-211ENST00000557623 OR2M4Q96R27 311 aa12.39□□□□□ -0.43
SLIRP-211ENST00000557623 C19orf43Q9BQ61 176 aa12.39□□□□□ -0.43
SLIRP-211ENST00000557623 APOL2Q9BQE5 337 aa12.39□□□□□ -0.43
SLIRP-211ENST00000557623 TMUB1Q9BVT8 246 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms