RNA–Protein interactions for RNA: ENST00000557159.5

APEX1-216, Transcript of apurinic/apyrimidinic endodeoxyribonuclease 1, humanhuman

TSL 2

Gene APEX1, Length 1,803 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APEX1-216ENST00000557159 DEAF1O75398 565 aaPredicted RBP12.51□□□□□ -0.41
APEX1-216ENST00000557159 GABARAPO95166 117 aa12.51□□□□□ -0.41
APEX1-216ENST00000557159 ALPLP05186 524 aa12.51□□□□□ -0.41
APEX1-216ENST00000557159 LTA4HP09960 611 aaKnown RBP12.51□□□□□ -0.41
APEX1-216ENST00000557159 PAMP19021 973 aa12.51□□□□□ -0.41
APEX1-216ENST00000557159 AVPR1AP37288 418 aa12.51□□□□□ -0.41
APEX1-216ENST00000557159 SERPINB10P48595 397 aa12.51□□□□□ -0.41
APEX1-216ENST00000557159 NEK2P51955 445 aa12.51□□□□□ -0.41
APEX1-216ENST00000557159 AQP6Q13520 282 aa12.51□□□□□ -0.41
APEX1-216ENST00000557159 DAG1Q14118 895 aa12.51□□□□□ -0.41
APEX1-216ENST00000557159 CTF1Q16619 201 aa12.51□□□□□ -0.41
APEX1-216ENST00000557159 SLX4IPQ5VYV7 408 aa12.51□□□□□ -0.41
APEX1-216ENST00000557159 NOTUMQ6P988 496 aa12.51□□□□□ -0.41
APEX1-216ENST00000557159 SLC27A1Q6PCB7 646 aa12.51□□□□□ -0.41
APEX1-216ENST00000557159 BLOC1S3Q6QNY0 202 aa12.51□□□□□ -0.41
APEX1-216ENST00000557159 CDR2LQ86X02 465 aaPredicted RBP12.51□□□□□ -0.41
APEX1-216ENST00000557159 PHYKPLQ8IUZ5 450 aa12.51□□□□□ -0.41
APEX1-216ENST00000557159 RIMKLAQ8IXN7 391 aa12.51□□□□□ -0.41
APEX1-216ENST00000557159 LRRC52Q8N7C0 313 aa12.51□□□□□ -0.41
APEX1-216ENST00000557159 BPIFB6Q8NFQ5 453 aa12.51□□□□□ -0.41
APEX1-216ENST00000557159 BEST2Q8NFU1 509 aa12.51□□□□□ -0.41
APEX1-216ENST00000557159 GABPB2Q8TAK5 448 aaPredicted RBP12.51□□□□□ -0.41
APEX1-216ENST00000557159 CLEC4CQ8WTT0 213 aa12.51□□□□□ -0.41
APEX1-216ENST00000557159 PHF10Q8WUB8 498 aaKnown RBP12.51□□□□□ -0.41
APEX1-216ENST00000557159 MUS81Q96NY9 551 aa12.51□□□□□ -0.41
APEX1-216ENST00000557159 YME1L1Q96TA2 773 aa12.51□□□□□ -0.41
APEX1-216ENST00000557159 SLC39A3Q9BRY0 314 aa12.51□□□□□ -0.41
APEX1-216ENST00000557159 FUNDC2Q9BWH2 189 aa12.51□□□□□ -0.41
APEX1-216ENST00000557159 ALG2Q9H553 416 aa12.51□□□□□ -0.41
APEX1-216ENST00000557159 TNFRSF12AQ9NP84 129 aa12.51□□□□□ -0.41
APEX1-216ENST00000557159 SCN1AP35498 2009 aa12.51□□□□□ -0.41
APEX1-216ENST00000557159 CDH1P12830 882 aa12.51□□□□□ -0.41
APEX1-216ENST00000557159 ERCC2P18074 760 aa12.51□□□□□ -0.41
APEX1-216ENST00000557159 NFKB1P19838 968 aa12.51□□□□□ -0.41
APEX1-216ENST00000557159 CAPN3P20807 821 aa12.51□□□□□ -0.41
APEX1-216ENST00000557159 EEF1B2P24534 225 aaKnown RBP12.51□□□□□ -0.41
APEX1-216ENST00000557159 GSK3BP49841 420 aa12.51□□□□□ -0.41
APEX1-216ENST00000557159 CLCN5P51795 746 aa12.51□□□□□ -0.41
APEX1-216ENST00000557159 SLC12A2P55011 1212 aa12.51□□□□□ -0.41
APEX1-216ENST00000557159 NKX3-2P78367 333 aa12.51□□□□□ -0.41
APEX1-216ENST00000557159 CD300CQ08708 224 aa12.51□□□□□ -0.41
APEX1-216ENST00000557159 SPCS2Q15005 226 aa12.51□□□□□ -0.41
APEX1-216ENST00000557159 ACOX1Q15067 660 aa12.51□□□□□ -0.41
APEX1-216ENST00000557159 MAPRE1Q15691 268 aaKnown RBP12.51□□□□□ -0.41
APEX1-216ENST00000557159 PITRM1Q5JRX3 1037 aa12.51□□□□□ -0.41
APEX1-216ENST00000557159 BTBD8Q5XKL5 378 aa12.51□□□□□ -0.41
APEX1-216ENST00000557159 LHX8Q68G74 356 aa12.51□□□□□ -0.41
APEX1-216ENST00000557159 PRSS48Q7RTY5 328 aa12.51□□□□□ -0.41
APEX1-216ENST00000557159 TLK2Q86UE8 772 aa12.51□□□□□ -0.41
APEX1-216ENST00000557159 C8orf59Q8N0T1 100 aaPredicted RBP12.51□□□□□ -0.41
APEX1-216ENST00000557159 DEFB106AQ8N104 65 aa12.51□□□□□ -0.41
APEX1-216ENST00000557159 C7orf31Q8N865 590 aa12.51□□□□□ -0.41
APEX1-216ENST00000557159 PJA1Q8NG27 643 aa12.51□□□□□ -0.41
APEX1-216ENST00000557159 HPS1Q92902 700 aa12.51□□□□□ -0.41
APEX1-216ENST00000557159 ZNF566Q969W8 418 aa12.51□□□□□ -0.41
APEX1-216ENST00000557159 PGLYRP2Q96PD5 576 aa12.51□□□□□ -0.41
APEX1-216ENST00000557159 SLC2A13Q96QE2 648 aa12.51□□□□□ -0.41
APEX1-216ENST00000557159 SLC30A3Q99726 388 aa12.51□□□□□ -0.41
APEX1-216ENST00000557159 MRPL45Q9BRJ2 306 aaKnown RBP12.51□□□□□ -0.41
APEX1-216ENST00000557159 PRKD2Q9BZL6 878 aa12.51□□□□□ -0.41
APEX1-216ENST00000557159 ING2Q9H160 280 aa12.51□□□□□ -0.41
APEX1-216ENST00000557159 ATP13A3Q9H7F0 1226 aa12.51□□□□□ -0.41
APEX1-216ENST00000557159 TREX1Q9NSU2 369 aa12.51□□□□□ -0.41
APEX1-216ENST00000557159 USE1Q9NZ43 259 aa12.51□□□□□ -0.41
APEX1-216ENST00000557159 MTRRQ9UBK8 725 aa12.51□□□□□ -0.41
APEX1-216ENST00000557159 UGT2A1Q9Y4X1 527 aa12.51□□□□□ -0.41
APEX1-216ENST00000557159 OAS3Q9Y6K5 1087 aaKnown RBP12.51□□□□□ -0.41
APEX1-216ENST00000557159 A0A1W2PP18 115 aa12.5□□□□□ -0.41
APEX1-216ENST00000557159 MBLAC1A4D2B0 266 aaPredicted RBP12.5□□□□□ -0.41
APEX1-216ENST00000557159 SPTLC1O15269 473 aa12.5□□□□□ -0.41
APEX1-216ENST00000557159 INPP4BO15327 924 aa12.5□□□□□ -0.41
APEX1-216ENST00000557159 WISP3O95389 354 aaPredicted RBP12.5□□□□□ -0.41
APEX1-216ENST00000557159 THRBP10828 461 aa12.5□□□□□ -0.41
APEX1-216ENST00000557159 BMP1P13497 986 aa12.5□□□□□ -0.41
APEX1-216ENST00000557159 CPB1P15086 417 aa12.5□□□□□ -0.41
APEX1-216ENST00000557159 ACVR2AP27037 513 aa12.5□□□□□ -0.41
APEX1-216ENST00000557159 YWHAQP27348 245 aa12.5□□□□□ -0.41
APEX1-216ENST00000557159 ARNTP27540 789 aa12.5□□□□□ -0.41
APEX1-216ENST00000557159 CD40LGP29965 261 aa12.5□□□□□ -0.41
APEX1-216ENST00000557159 ETFBP38117 255 aa12.5□□□□□ -0.41
APEX1-216ENST00000557159 SELENBP1Q13228 472 aa12.5□□□□□ -0.41
APEX1-216ENST00000557159 FSCN1Q16658 493 aaKnown RBP12.5□□□□□ -0.41
APEX1-216ENST00000557159 ZNF678Q5SXM1 525 aa12.5□□□□□ -0.41
APEX1-216ENST00000557159 ITIH5Q86UX2 942 aa12.5□□□□□ -0.41
APEX1-216ENST00000557159 CCDC97Q96F63 343 aaPredicted RBP12.5□□□□□ -0.41
APEX1-216ENST00000557159 KIF12Q96FN5 646 aa12.5□□□□□ -0.41
APEX1-216ENST00000557159 XRN2Q9H0D6 950 aaKnown RBP eCLIP12.5□□□□□ -0.41
APEX1-216ENST00000557159 RNF208Q9H0X6 261 aa12.5□□□□□ -0.41
APEX1-216ENST00000557159 AKTIPQ9H8T0 292 aa12.5□□□□□ -0.41
APEX1-216ENST00000557159 SCUBE2Q9NQ36 999 aa12.5□□□□□ -0.41
APEX1-216ENST00000557159 GMPR2Q9P2T1 348 aaKnown RBP12.5□□□□□ -0.41
APEX1-216ENST00000557159 EGFL7Q9UHF1 273 aa12.5□□□□□ -0.41
APEX1-216ENST00000557159 PDE10AQ9Y233 779 aa12.5□□□□□ -0.41
APEX1-216ENST00000557159 NME7Q9Y5B8 376 aa12.5□□□□□ -0.41
APEX1-216ENST00000557159 UPK1AO00322 258 aa12.49□□□□□ -0.41
APEX1-216ENST00000557159 NR5A2O00482 541 aa12.49□□□□□ -0.41
APEX1-216ENST00000557159 UBFD1O14562 309 aaKnown RBP12.49□□□□□ -0.41
APEX1-216ENST00000557159 EEDO75530 441 aaKnown RBP12.49□□□□□ -0.41
APEX1-216ENST00000557159 MYO1DO94832 1006 aa12.49□□□□□ -0.41
APEX1-216ENST00000557159 F2P00734 622 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms