RNA–Protein interactions for RNA: ENST00000556958.5

ATXN3-245, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 769 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-245ENST00000556958 HHEXQ03014 270 aa5.7□□□□□ -1.5
ATXN3-245ENST00000556958 RBPJQ06330 500 aa5.7□□□□□ -1.5
ATXN3-245ENST00000556958 TYRO3Q06418 890 aa5.7□□□□□ -1.5
ATXN3-245ENST00000556958 Q0VFX4 171 aa5.7□□□□□ -1.5
ATXN3-245ENST00000556958 LONRF1Q17RB8 773 aa5.7□□□□□ -1.5
ATXN3-245ENST00000556958 SAMD5Q5TGI4 173 aa5.7□□□□□ -1.5
ATXN3-245ENST00000556958 IZUMO3Q5VZ72 239 aa5.7□□□□□ -1.5
ATXN3-245ENST00000556958 CES4AQ5XG92 561 aa5.7□□□□□ -1.5
ATXN3-245ENST00000556958 FAAH2Q6GMR7 532 aa5.7□□□□□ -1.5
ATXN3-245ENST00000556958 FAM199XQ6PEV8 388 aaPredicted RBP5.7□□□□□ -1.5
ATXN3-245ENST00000556958 GFRALQ6UXV0 394 aa5.7□□□□□ -1.5
ATXN3-245ENST00000556958 ZNF783Q6ZMS7 281 aa5.7□□□□□ -1.5
ATXN3-245ENST00000556958 CCDC73Q6ZRK6 1079 aa5.7□□□□□ -1.5
ATXN3-245ENST00000556958 TMEM200AQ86VY9 491 aa5.7□□□□□ -1.5
ATXN3-245ENST00000556958 RAB43Q86YS6 212 aa5.7□□□□□ -1.5
ATXN3-245ENST00000556958 NELFCDQ8IXH7 590 aa5.7□□□□□ -1.5
ATXN3-245ENST00000556958 CBARPQ8N350 705 aaPredicted RBP5.7□□□□□ -1.5
ATXN3-245ENST00000556958 GALNT16Q8N428 558 aa5.7□□□□□ -1.5
ATXN3-245ENST00000556958 AVL9Q8NBF6 648 aa5.7□□□□□ -1.5
ATXN3-245ENST00000556958 OR2AP1Q8NGE2 309 aa5.7□□□□□ -1.5
ATXN3-245ENST00000556958 DNAJB14Q8TBM8 379 aa5.7□□□□□ -1.5
ATXN3-245ENST00000556958 HCAR2Q8TDS4 363 aa5.7□□□□□ -1.5
ATXN3-245ENST00000556958 ADAMTS17Q8TE56 1095 aa5.7□□□□□ -1.5
ATXN3-245ENST00000556958 PPP4R1Q8TF05 950 aa5.7□□□□□ -1.5
ATXN3-245ENST00000556958 SLC35F5Q8WV83 523 aa5.7□□□□□ -1.5
ATXN3-245ENST00000556958 PATE1Q8WXA2 126 aa5.7□□□□□ -1.5
ATXN3-245ENST00000556958 INPP5DQ92835 1189 aa5.7□□□□□ -1.5
ATXN3-245ENST00000556958 HMCESQ96FZ2 354 aa5.7□□□□□ -1.5
ATXN3-245ENST00000556958 C9orf72Q96LT7 481 aa5.7□□□□□ -1.5
ATXN3-245ENST00000556958 ALPK1Q96QP1 1244 aa5.7□□□□□ -1.5
ATXN3-245ENST00000556958 BACH2Q9BYV9 841 aa5.7□□□□□ -1.5
ATXN3-245ENST00000556958 TM6SF2Q9BZW4 377 aa5.7□□□□□ -1.5
ATXN3-245ENST00000556958 MIS12Q9H081 205 aa5.7□□□□□ -1.5
ATXN3-245ENST00000556958 ZNF552Q9H707 407 aaPredicted RBP5.7□□□□□ -1.5
ATXN3-245ENST00000556958 SARS2Q9NP81 518 aaKnown RBP5.7□□□□□ -1.5
ATXN3-245ENST00000556958 RARRES3Q9UL19 164 aa5.7□□□□□ -1.5
ATXN3-245ENST00000556958 COQ6Q9Y2Z9 468 aa5.7□□□□□ -1.5
ATXN3-245ENST00000556958 PLEKHM1Q9Y4G2 1056 aa5.7□□□□□ -1.5
ATXN3-245ENST00000556958 TDRD6O60522 2096 aaKnown RBP5.7□□□□□ -1.5
ATXN3-245ENST00000556958 PRRC2AP48634 2157 aaKnown RBP5.69□□□□□ -1.5
ATXN3-245ENST00000556958 CROCCQ5TZA2 2017 aa5.69□□□□□ -1.5
ATXN3-245ENST00000556958 TRBV23OR9-2A0A075B6M9 112 aa5.69□□□□□ -1.5
ATXN3-245ENST00000556958 A0A0D9SEW6 157 aa5.69□□□□□ -1.5
ATXN3-245ENST00000556958 ILVBLA1L0T0 632 aa5.69□□□□□ -1.5
ATXN3-245ENST00000556958 PEX12O00623 359 aa5.69□□□□□ -1.5
ATXN3-245ENST00000556958 PCDH17O14917 1159 aa5.69□□□□□ -1.5
ATXN3-245ENST00000556958 TEX33O43247 280 aa5.69□□□□□ -1.5
ATXN3-245ENST00000556958 RASSF9O75901 435 aa5.69□□□□□ -1.5
ATXN3-245ENST00000556958 GSRP00390 522 aa5.69□□□□□ -1.5
ATXN3-245ENST00000556958 FYNP06241 537 aa5.69□□□□□ -1.5
ATXN3-245ENST00000556958 FAM157BP0CG42 384 aa5.69□□□□□ -1.5
ATXN3-245ENST00000556958 SLC2A4P14672 509 aa5.69□□□□□ -1.5
ATXN3-245ENST00000556958 DNASE1P24855 282 aa5.69□□□□□ -1.5
ATXN3-245ENST00000556958 AK4P27144 223 aaPredicted RBP5.69□□□□□ -1.5
ATXN3-245ENST00000556958 OR1E1P30953 314 aa5.69□□□□□ -1.5
ATXN3-245ENST00000556958 ETFBP38117 255 aa5.69□□□□□ -1.5
ATXN3-245ENST00000556958 CA7P43166 264 aa5.69□□□□□ -1.5
ATXN3-245ENST00000556958 MAPK9P45984 424 aa5.69□□□□□ -1.5
ATXN3-245ENST00000556958 GNPDA1P46926 289 aa5.69□□□□□ -1.5
ATXN3-245ENST00000556958 SEPHS1P49903 392 aa5.69□□□□□ -1.5
ATXN3-245ENST00000556958 LIG3P49916 1009 aa5.69□□□□□ -1.5
ATXN3-245ENST00000556958 KCNK10P57789 538 aa5.69□□□□□ -1.5
ATXN3-245ENST00000556958 ANAPC15P60006 121 aa5.69□□□□□ -1.5
ATXN3-245ENST00000556958 YWHAEP62258 255 aaKnown RBP5.69□□□□□ -1.5
ATXN3-245ENST00000556958 ADAM8P78325 824 aa5.69□□□□□ -1.5
ATXN3-245ENST00000556958 DLG4P78352 724 aa5.69□□□□□ -1.5
ATXN3-245ENST00000556958 CDK17Q00537 523 aa5.69□□□□□ -1.5
ATXN3-245ENST00000556958 AMPD3Q01432 767 aa5.69□□□□□ -1.5
ATXN3-245ENST00000556958 TNP2Q05952 138 aa5.69□□□□□ -1.5
ATXN3-245ENST00000556958 CEBPEQ15744 281 aa5.69□□□□□ -1.5
ATXN3-245ENST00000556958 KNOP1Q1ED39 458 aaKnown RBP5.69□□□□□ -1.5
ATXN3-245ENST00000556958 C5orf22Q49AR2 442 aa5.69□□□□□ -1.5
ATXN3-245ENST00000556958 FAM26FQ5R3K3 315 aa5.69□□□□□ -1.5
ATXN3-245ENST00000556958 ACBD5Q5T8D3 534 aaPredicted RBP5.69□□□□□ -1.5
ATXN3-245ENST00000556958 RPUSD3Q6P087 351 aaKnown RBP5.69□□□□□ -1.5
ATXN3-245ENST00000556958 PMF1Q6P1K2 205 aa5.69□□□□□ -1.5
ATXN3-245ENST00000556958 DUS1LQ6P1R4 473 aaKnown RBP5.69□□□□□ -1.5
ATXN3-245ENST00000556958 LCLAT1Q6UWP7 414 aa5.69□□□□□ -1.5
ATXN3-245ENST00000556958 LRRC31Q6UY01 552 aa5.69□□□□□ -1.5
ATXN3-245ENST00000556958 EPM2AIP1Q7L775 607 aaPredicted RBP5.69□□□□□ -1.5
ATXN3-245ENST00000556958 SLC9B2Q86UD5 537 aa5.69□□□□□ -1.5
ATXN3-245ENST00000556958 ZNF761Q86XN6 746 aaPredicted RBP5.69□□□□□ -1.5
ATXN3-245ENST00000556958 SFRP1Q8N474 314 aa5.69□□□□□ -1.5
ATXN3-245ENST00000556958 PLA2G15Q8NCC3 412 aa5.69□□□□□ -1.5
ATXN3-245ENST00000556958 OR6K2Q8NGY2 324 aa5.69□□□□□ -1.5
ATXN3-245ENST00000556958 MR1Q95460 341 aa5.69□□□□□ -1.5
ATXN3-245ENST00000556958 RNF31Q96EP0 1072 aa5.69□□□□□ -1.5
ATXN3-245ENST00000556958 EPSTI1Q96J88 318 aa5.69□□□□□ -1.5
ATXN3-245ENST00000556958 MED15Q96RN5 788 aa5.69□□□□□ -1.5
ATXN3-245ENST00000556958 RUFY1Q96T51 708 aa5.69□□□□□ -1.5
ATXN3-245ENST00000556958 ZNF559Q9BR84 538 aa5.69□□□□□ -1.5
ATXN3-245ENST00000556958 NLNQ9BYT8 704 aa5.69□□□□□ -1.5
ATXN3-245ENST00000556958 SUDS3Q9H7L9 328 aaPredicted RBP5.69□□□□□ -1.5
ATXN3-245ENST00000556958 POPDC2Q9HBU9 364 aa5.69□□□□□ -1.5
ATXN3-245ENST00000556958 ATP13A1Q9HD20 1204 aa5.69□□□□□ -1.5
ATXN3-245ENST00000556958 PHPT1Q9NRX4 125 aaPredicted RBP5.69□□□□□ -1.5
ATXN3-245ENST00000556958 KCTD5Q9NXV2 234 aa5.69□□□□□ -1.5
ATXN3-245ENST00000556958 AJAP1Q9UKB5 411 aaPredicted RBP5.69□□□□□ -1.5
ATXN3-245ENST00000556958 TCFL5Q9UL49 500 aa5.69□□□□□ -1.5
ATXN3-245ENST00000556958 FRMD4BQ9Y2L6 1034 aa5.69□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms