RNA–Protein interactions for RNA: ENST00000556285.1

TGFB3-204, Transcript of transforming growth factor beta 3, humanhuman

TSL 1 (best) BASIC

Gene TGFB3, Length 1,280 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFB3-204ENST00000556285 PCDH9Q9HC56 1237 aa13.18□□□□□ -0.3
TGFB3-204ENST00000556285 ARFGAP3Q9NP61 516 aa13.18□□□□□ -0.3
TGFB3-204ENST00000556285 AKAP7Q9P0M2 348 aaPredicted RBP13.18□□□□□ -0.3
TGFB3-204ENST00000556285 TBC1D29Q9UFV1 150 aa13.18□□□□□ -0.3
TGFB3-204ENST00000556285 ZNHIT2Q9UHR6 403 aa13.18□□□□□ -0.3
TGFB3-204ENST00000556285 KCNK6Q9Y257 313 aa13.18□□□□□ -0.3
TGFB3-204ENST00000556285 PCDHB11Q9Y5F2 797 aa13.18□□□□□ -0.3
TGFB3-204ENST00000556285 MAST4O15021 2626 aa13.17□□□□□ -0.3
TGFB3-204ENST00000556285 DOPEY2Q9Y3R5 2298 aa13.17□□□□□ -0.3
TGFB3-204ENST00000556285 NBPF19A0A087WUL8 3843 aa13.17□□□□□ -0.3
TGFB3-204ENST00000556285 C1orf232A0A0U1RR37 186 aa13.17□□□□□ -0.3
TGFB3-204ENST00000556285 EFCAB7A8K855 629 aa13.17□□□□□ -0.3
TGFB3-204ENST00000556285 KCNK1O00180 336 aa13.17□□□□□ -0.3
TGFB3-204ENST00000556285 ARHGAP6O43182 974 aa13.17□□□□□ -0.3
TGFB3-204ENST00000556285 JCHAINP01591 159 aa13.17□□□□□ -0.3
TGFB3-204ENST00000556285 ITGB2P05107 769 aa13.17□□□□□ -0.3
TGFB3-204ENST00000556285 CASP14P31944 242 aa13.17□□□□□ -0.3
TGFB3-204ENST00000556285 CD86P42081 329 aa13.17□□□□□ -0.3
TGFB3-204ENST00000556285 ZBTB17Q13105 803 aa13.17□□□□□ -0.3
TGFB3-204ENST00000556285 NFATC2Q13469 925 aa13.17□□□□□ -0.3
TGFB3-204ENST00000556285 CLPPQ16740 277 aaPredicted RBP13.17□□□□□ -0.3
TGFB3-204ENST00000556285 SNAP47Q5SQN1 464 aa13.17□□□□□ -0.3
TGFB3-204ENST00000556285 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.17□□□□□ -0.3
TGFB3-204ENST00000556285 TMEM164Q5U3C3 297 aa13.17□□□□□ -0.3
TGFB3-204ENST00000556285 ANKS6Q68DC2 871 aa13.17□□□□□ -0.3
TGFB3-204ENST00000556285 TIGD7Q6NT04 549 aaPredicted RBP13.17□□□□□ -0.3
TGFB3-204ENST00000556285 TMEM71Q6P5X7 295 aa13.17□□□□□ -0.3
TGFB3-204ENST00000556285 CHST15Q7LFX5 561 aaPredicted RBP13.17□□□□□ -0.3
TGFB3-204ENST00000556285 NRSN1Q8IZ57 195 aa13.17□□□□□ -0.3
TGFB3-204ENST00000556285 CNTD1Q8N815 330 aa13.17□□□□□ -0.3
TGFB3-204ENST00000556285 CCNYQ8ND76 341 aa13.17□□□□□ -0.3
TGFB3-204ENST00000556285 AGBL5Q8NDL9 886 aa13.17□□□□□ -0.3
TGFB3-204ENST00000556285 FATE1Q969F0 183 aa13.17□□□□□ -0.3
TGFB3-204ENST00000556285 EID2BQ96D98 161 aa13.17□□□□□ -0.3
TGFB3-204ENST00000556285 ARHGAP9Q9BRR9 750 aa13.17□□□□□ -0.3
TGFB3-204ENST00000556285 ZNF670Q9BS34 389 aa13.17□□□□□ -0.3
TGFB3-204ENST00000556285 SLC12A9Q9BXP2 914 aa13.17□□□□□ -0.3
TGFB3-204ENST00000556285 CEP41Q9BYV8 373 aa13.17□□□□□ -0.3
TGFB3-204ENST00000556285 B3GNT4Q9C0J1 378 aa13.17□□□□□ -0.3
TGFB3-204ENST00000556285 SLC39A1Q9NY26 324 aa13.17□□□□□ -0.3
TGFB3-204ENST00000556285 DTLQ9NZJ0 730 aa13.17□□□□□ -0.3
TGFB3-204ENST00000556285 IFNKQ9P0W0 207 aa13.17□□□□□ -0.3
TGFB3-204ENST00000556285 CTTNBP2NLQ9P2B4 639 aa13.17□□□□□ -0.3
TGFB3-204ENST00000556285 LUC7L2Q9Y383 392 aaKnown RBP13.17□□□□□ -0.3
TGFB3-204ENST00000556285 PCDHGA3Q9Y5H0 932 aa13.17□□□□□ -0.3
TGFB3-204ENST00000556285 STMND1H3BQB6 276 aa13.16□□□□□ -0.3
TGFB3-204ENST00000556285 SUV39H1O43463 412 aa13.16□□□□□ -0.3
TGFB3-204ENST00000556285 SNX2O60749 519 aa13.16□□□□□ -0.3
TGFB3-204ENST00000556285 PIRTP0C851 137 aa13.16□□□□□ -0.3
TGFB3-204ENST00000556285 ACP5P13686 325 aa13.16□□□□□ -0.3
TGFB3-204ENST00000556285 LIFP15018 202 aa13.16□□□□□ -0.3
TGFB3-204ENST00000556285 CD82P27701 267 aa13.16□□□□□ -0.3
TGFB3-204ENST00000556285 CSTF2P33240 577 aaKnown RBP eCLIP13.16□□□□□ -0.3
TGFB3-204ENST00000556285 UGT1A3P35503 534 aa13.16□□□□□ -0.3
TGFB3-204ENST00000556285 FASLGP48023 281 aa13.16□□□□□ -0.3
TGFB3-204ENST00000556285 SPINT3P49223 89 aa13.16□□□□□ -0.3
TGFB3-204ENST00000556285 TRA2AQ13595 282 aaKnown RBP eCLIP13.16□□□□□ -0.3
TGFB3-204ENST00000556285 GALNT3Q14435 633 aa13.16□□□□□ -0.3
TGFB3-204ENST00000556285 PDK2Q15119 407 aa13.16□□□□□ -0.3
TGFB3-204ENST00000556285 HENMT1Q5T8I9 393 aaKnown RBP13.16□□□□□ -0.3
TGFB3-204ENST00000556285 IYDQ6PHW0 289 aa13.16□□□□□ -0.3
TGFB3-204ENST00000556285 B4GALNT4Q76KP1 1039 aa13.16□□□□□ -0.3
TGFB3-204ENST00000556285 LYSMD3Q7Z3D4 306 aa13.16□□□□□ -0.3
TGFB3-204ENST00000556285 KDELC2Q7Z4H8 507 aa13.16□□□□□ -0.3
TGFB3-204ENST00000556285 FAM129CQ86XR2 697 aa13.16□□□□□ -0.3
TGFB3-204ENST00000556285 CCDC13Q8IYE1 715 aa13.16□□□□□ -0.3
TGFB3-204ENST00000556285 BMPERQ8N8U9 685 aa13.16□□□□□ -0.3
TGFB3-204ENST00000556285 LYSMD1Q96S90 227 aa13.16□□□□□ -0.3
TGFB3-204ENST00000556285 SLC38A3Q99624 504 aa13.16□□□□□ -0.3
TGFB3-204ENST00000556285 CTRCQ99895 268 aa13.16□□□□□ -0.3
TGFB3-204ENST00000556285 FAM83DQ9H4H8 585 aa13.16□□□□□ -0.3
TGFB3-204ENST00000556285 RYDENQ9NUL5 291 aaKnown RBP13.16□□□□□ -0.3
TGFB3-204ENST00000556285 IL17BQ9UHF5 180 aa13.16□□□□□ -0.3
TGFB3-204ENST00000556285 AMACRQ9UHK6 382 aa13.16□□□□□ -0.3
TGFB3-204ENST00000556285 PTPN13Q12923 2485 aa13.16□□□□□ -0.3
TGFB3-204ENST00000556285 SPTA1P02549 2419 aa13.15□□□□□ -0.3
TGFB3-204ENST00000556285 A6NCN8 305 aa13.15□□□□□ -0.3
TGFB3-204ENST00000556285 ANKRD66B4E2M5 251 aa13.15□□□□□ -0.3
TGFB3-204ENST00000556285 ZW10O43264 779 aa13.15□□□□□ -0.3
TGFB3-204ENST00000556285 CES1P23141 567 aa13.15□□□□□ -0.3
TGFB3-204ENST00000556285 KDELR1P24390 212 aa13.15□□□□□ -0.3
TGFB3-204ENST00000556285 PPM1FP49593 454 aaPredicted RBP13.15□□□□□ -0.3
TGFB3-204ENST00000556285 RPL26P61254 145 aaKnown RBP13.15□□□□□ -0.3
TGFB3-204ENST00000556285 GPLD1P80108 840 aa13.15□□□□□ -0.3
TGFB3-204ENST00000556285 HHEXQ03014 270 aa13.15□□□□□ -0.3
TGFB3-204ENST00000556285 PEX6Q13608 980 aa13.15□□□□□ -0.3
TGFB3-204ENST00000556285 LRP8Q14114 963 aa13.15□□□□□ -0.3
TGFB3-204ENST00000556285 ALS2CLQ60I27 953 aa13.15□□□□□ -0.3
TGFB3-204ENST00000556285 NPNTQ6UXI9 565 aa13.15□□□□□ -0.3
TGFB3-204ENST00000556285 PLD5Q8N7P1 536 aa13.15□□□□□ -0.3
TGFB3-204ENST00000556285 ZSCAN1Q8NBB4 408 aa13.15□□□□□ -0.3
TGFB3-204ENST00000556285 HDAC11Q96DB2 347 aa13.15□□□□□ -0.3
TGFB3-204ENST00000556285 RNF31Q96EP0 1072 aa13.15□□□□□ -0.3
TGFB3-204ENST00000556285 AHCYL2Q96HN2 611 aaKnown RBP13.15□□□□□ -0.3
TGFB3-204ENST00000556285 RNF157Q96PX1 679 aa13.15□□□□□ -0.3
TGFB3-204ENST00000556285 MLPHQ9BV36 600 aaPredicted RBP13.15□□□□□ -0.3
TGFB3-204ENST00000556285 DDA1Q9BW61 102 aa13.15□□□□□ -0.3
TGFB3-204ENST00000556285 FAM117AQ9C073 453 aa13.15□□□□□ -0.3
TGFB3-204ENST00000556285 ZMYND15Q9H091 742 aa13.15□□□□□ -0.3
TGFB3-204ENST00000556285 VPS18Q9P253 973 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms