RNA–Protein interactions for RNA: ENST00000556082.5

ATXN3-235, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 660 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-235ENST00000556082 KIRREL3Q8IZU9 778 aa8.28□□□□□ -1.08
ATXN3-235ENST00000556082 APCDD1Q8J025 514 aa8.28□□□□□ -1.08
ATXN3-235ENST00000556082 FSTL5Q8N475 847 aaPredicted RBP8.28□□□□□ -1.08
ATXN3-235ENST00000556082 TTC30BQ8N4P2 665 aa8.28□□□□□ -1.08
ATXN3-235ENST00000556082 GPATCH11Q8N954 259 aa8.28□□□□□ -1.08
ATXN3-235ENST00000556082 MDGA1Q8NFP4 955 aa8.28□□□□□ -1.08
ATXN3-235ENST00000556082 SH3RF2Q8TEC5 729 aa8.28□□□□□ -1.08
ATXN3-235ENST00000556082 HEXDCQ8WVB3 486 aa8.28□□□□□ -1.08
ATXN3-235ENST00000556082 KCTD4Q8WVF5 259 aa8.28□□□□□ -1.08
ATXN3-235ENST00000556082 NXNL1Q96CM4 212 aa8.28□□□□□ -1.08
ATXN3-235ENST00000556082 KLHL29Q96CT2 875 aa8.28□□□□□ -1.08
ATXN3-235ENST00000556082 RMDN1Q96DB5 314 aa8.28□□□□□ -1.08
ATXN3-235ENST00000556082 OTUB2Q96DC9 234 aa8.28□□□□□ -1.08
ATXN3-235ENST00000556082 THOC1Q96FV9 657 aaKnown RBP8.28□□□□□ -1.08
ATXN3-235ENST00000556082 NSL1Q96IY1 281 aa8.28□□□□□ -1.08
ATXN3-235ENST00000556082 OLFM1Q99784 485 aa8.28□□□□□ -1.08
ATXN3-235ENST00000556082 GATA5Q9BWX5 397 aaPredicted RBP8.28□□□□□ -1.08
ATXN3-235ENST00000556082 CEP44Q9C0F1 390 aa8.28□□□□□ -1.08
ATXN3-235ENST00000556082 ILKAPQ9H0C8 392 aaPredicted RBP8.28□□□□□ -1.08
ATXN3-235ENST00000556082 TLE6Q9H808 572 aa8.28□□□□□ -1.08
ATXN3-235ENST00000556082 SLC40A1Q9NP59 571 aa8.28□□□□□ -1.08
ATXN3-235ENST00000556082 FBXO6Q9NRD1 293 aaPredicted RBP8.28□□□□□ -1.08
ATXN3-235ENST00000556082 ZDHHC7Q9NXF8 308 aa8.28□□□□□ -1.08
ATXN3-235ENST00000556082 MARCH4Q9P2E8 410 aaPredicted RBP8.28□□□□□ -1.08
ATXN3-235ENST00000556082 TBC1D14Q9P2M4 693 aa8.28□□□□□ -1.08
ATXN3-235ENST00000556082 APOBEC2Q9Y235 224 aaKnown RBP8.28□□□□□ -1.08
ATXN3-235ENST00000556082 HS3ST2Q9Y278 367 aa8.28□□□□□ -1.08
ATXN3-235ENST00000556082 DNAJC16Q9Y2G8 782 aa8.28□□□□□ -1.08
ATXN3-235ENST00000556082 RAP2CQ9Y3L5 183 aa8.28□□□□□ -1.08
ATXN3-235ENST00000556082 COMMD10Q9Y6G5 202 aa8.28□□□□□ -1.08
ATXN3-235ENST00000556082 ANAPC1Q9H1A4 1944 aa8.27□□□□□ -1.09
ATXN3-235ENST00000556082 KIAA1671Q9BY89 1806 aa8.27□□□□□ -1.09
ATXN3-235ENST00000556082 CCDC195A0A1B0GUA6 201 aa8.27□□□□□ -1.09
ATXN3-235ENST00000556082 A0A1W2PQ67 120 aa8.27□□□□□ -1.09
ATXN3-235ENST00000556082 FCHO1O14526 889 aa8.27□□□□□ -1.09
ATXN3-235ENST00000556082 ZNF197O14709 1029 aa8.27□□□□□ -1.09
ATXN3-235ENST00000556082 SLC9A3R1O14745 358 aaPredicted RBP8.27□□□□□ -1.09
ATXN3-235ENST00000556082 MGRN1O60291 552 aa8.27□□□□□ -1.09
ATXN3-235ENST00000556082 DLX3O60479 287 aa8.27□□□□□ -1.09
ATXN3-235ENST00000556082 ZNF821O75541 412 aaPredicted RBP8.27□□□□□ -1.09
ATXN3-235ENST00000556082 MT-CO1P00395 513 aa8.27□□□□□ -1.09
ATXN3-235ENST00000556082 SERPINA6P08185 405 aa8.27□□□□□ -1.09
ATXN3-235ENST00000556082 SAT1P21673 171 aa8.27□□□□□ -1.09
ATXN3-235ENST00000556082 SERPINB3P29508 390 aa8.27□□□□□ -1.09
ATXN3-235ENST00000556082 PMLP29590 882 aa8.27□□□□□ -1.09
ATXN3-235ENST00000556082 ARRB2P32121 409 aa8.27□□□□□ -1.09
ATXN3-235ENST00000556082 CA8P35219 290 aa8.27□□□□□ -1.09
ATXN3-235ENST00000556082 HMGCLP35914 325 aa8.27□□□□□ -1.09
ATXN3-235ENST00000556082 AVPR1AP37288 418 aa8.27□□□□□ -1.09
ATXN3-235ENST00000556082 CCR2P41597 374 aa8.27□□□□□ -1.09
ATXN3-235ENST00000556082 TTPAP49638 278 aa8.27□□□□□ -1.09
ATXN3-235ENST00000556082 PFKPQ01813 784 aa8.27□□□□□ -1.09
ATXN3-235ENST00000556082 SULT2A1Q06520 285 aa8.27□□□□□ -1.09
ATXN3-235ENST00000556082 GALNT1Q10472 559 aaPredicted RBP8.27□□□□□ -1.09
ATXN3-235ENST00000556082 DLG1Q12959 904 aa8.27□□□□□ -1.09
ATXN3-235ENST00000556082 PRKAA1Q13131 559 aa8.27□□□□□ -1.09
ATXN3-235ENST00000556082 TUBB3Q13509 450 aa8.27□□□□□ -1.09
ATXN3-235ENST00000556082 RCN2Q14257 317 aa8.27□□□□□ -1.09
ATXN3-235ENST00000556082 ZNF789Q5FWF6 425 aa8.27□□□□□ -1.09
ATXN3-235ENST00000556082 AARS2Q5JTZ9 985 aaKnown RBP8.27□□□□□ -1.09
ATXN3-235ENST00000556082 RBM20Q5T481 1227 aaKnown RBP8.27□□□□□ -1.09
ATXN3-235ENST00000556082 GPR158Q5T848 1215 aa8.27□□□□□ -1.09
ATXN3-235ENST00000556082 ARMC12Q5T9G4 340 aa8.27□□□□□ -1.09
ATXN3-235ENST00000556082 PLPP4Q5VZY2 271 aa8.27□□□□□ -1.09
ATXN3-235ENST00000556082 ZNF549Q6P9A3 640 aa8.27□□□□□ -1.09
ATXN3-235ENST00000556082 EPGNQ6UW88 154 aa8.27□□□□□ -1.09
ATXN3-235ENST00000556082 LINGO4Q6UY18 593 aa8.27□□□□□ -1.09
ATXN3-235ENST00000556082 NAPRTQ6XQN6 538 aa8.27□□□□□ -1.09
ATXN3-235ENST00000556082 ZCCHC23Q6ZST2 131 aa8.27□□□□□ -1.09
ATXN3-235ENST00000556082 PIWIL4Q7Z3Z4 852 aaKnown RBP8.27□□□□□ -1.09
ATXN3-235ENST00000556082 GLT6D1Q7Z4J2 308 aa8.27□□□□□ -1.09
ATXN3-235ENST00000556082 KIAA0907Q7Z7F0 614 aaPredicted RBP8.27□□□□□ -1.09
ATXN3-235ENST00000556082 TREML1Q86YW5 311 aa8.27□□□□□ -1.09
ATXN3-235ENST00000556082 CBARPQ8N350 705 aaPredicted RBP8.27□□□□□ -1.09
ATXN3-235ENST00000556082 OR4K2Q8NGD2 314 aa8.27□□□□□ -1.09
ATXN3-235ENST00000556082 OR13C4Q8NGS5 318 aa8.27□□□□□ -1.09
ATXN3-235ENST00000556082 WFDC5Q8TCV5 224 aa8.27□□□□□ -1.09
ATXN3-235ENST00000556082 PIH1D2Q8WWB5 315 aa8.27□□□□□ -1.09
ATXN3-235ENST00000556082 LPGAT1Q92604 370 aa8.27□□□□□ -1.09
ATXN3-235ENST00000556082 TP53INP1Q96A56 240 aa8.27□□□□□ -1.09
ATXN3-235ENST00000556082 SLC7A6OSQ96CW6 309 aaPredicted RBP8.27□□□□□ -1.09
ATXN3-235ENST00000556082 PTCD3Q96EY7 689 aaKnown RBP8.27□□□□□ -1.09
ATXN3-235ENST00000556082 SCYL1Q96KG9 808 aa8.27□□□□□ -1.09
ATXN3-235ENST00000556082 CNDP1Q96KN2 507 aa8.27□□□□□ -1.09
ATXN3-235ENST00000556082 RAB3IPQ96QF0 476 aaPredicted RBP8.27□□□□□ -1.09
ATXN3-235ENST00000556082 TUBGCP5Q96RT8 1024 aa8.27□□□□□ -1.09
ATXN3-235ENST00000556082 LYSMD1Q96S90 227 aa8.27□□□□□ -1.09
ATXN3-235ENST00000556082 AARSD1Q9BTE6 412 aaKnown RBP8.27□□□□□ -1.09
ATXN3-235ENST00000556082 SLC2A11Q9BYW1 496 aa8.27□□□□□ -1.09
ATXN3-235ENST00000556082 CPEB1Q9BZB8 566 aaKnown RBP8.27□□□□□ -1.09
ATXN3-235ENST00000556082 SUDS3Q9H7L9 328 aaPredicted RBP8.27□□□□□ -1.09
ATXN3-235ENST00000556082 SYTL2Q9HCH5 934 aa8.27□□□□□ -1.09
ATXN3-235ENST00000556082 ZFP64Q9NPA5 681 aa8.27□□□□□ -1.09
ATXN3-235ENST00000556082 MAN1C1Q9NR34 630 aa8.27□□□□□ -1.09
ATXN3-235ENST00000556082 TDP1Q9NUW8 608 aa8.27□□□□□ -1.09
ATXN3-235ENST00000556082 VTI1BQ9UEU0 232 aa8.27□□□□□ -1.09
ATXN3-235ENST00000556082 PPIL1Q9Y3C6 166 aa8.27□□□□□ -1.09
ATXN3-235ENST00000556082 KIAA0100Q14667 2235 aaKnown RBP8.26□□□□□ -1.09
ATXN3-235ENST00000556082 PLXNA4Q9HCM2 1894 aa8.26□□□□□ -1.09
ATXN3-235ENST00000556082 SCO2A0A1W2PP80 73 aa8.26□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms