RNA–Protein interactions for RNA: ENST00000555867.1

PSEN1-214, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 876 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-214ENST00000555867 OVGP1Q12889 678 aa6.5□□□□□ -1.37
PSEN1-214ENST00000555867 PLD1Q13393 1074 aa6.5□□□□□ -1.37
PSEN1-214ENST00000555867 SERINC3Q13530 473 aa6.5□□□□□ -1.37
PSEN1-214ENST00000555867 ZNF235Q14590 738 aa6.5□□□□□ -1.37
PSEN1-214ENST00000555867 VEPH1Q14D04 833 aa6.5□□□□□ -1.37
PSEN1-214ENST00000555867 PCLAFQ15004 111 aa6.5□□□□□ -1.37
PSEN1-214ENST00000555867 POLD3Q15054 466 aaPredicted RBP6.5□□□□□ -1.37
PSEN1-214ENST00000555867 ZRSR2Q15696 482 aaKnown RBP6.5□□□□□ -1.37
PSEN1-214ENST00000555867 DNAL1Q4LDG9 190 aa6.5□□□□□ -1.37
PSEN1-214ENST00000555867 HSP90AA5PQ58FG0 334 aa6.5□□□□□ -1.37
PSEN1-214ENST00000555867 MBLAC2Q68D91 279 aa6.5□□□□□ -1.37
PSEN1-214ENST00000555867 TANGO2Q6ICL3 276 aa6.5□□□□□ -1.37
PSEN1-214ENST00000555867 FBXL22Q6P050 247 aa6.5□□□□□ -1.37
PSEN1-214ENST00000555867 KDELC1Q6UW63 502 aa6.5□□□□□ -1.37
PSEN1-214ENST00000555867 ZNF783Q6ZMS7 281 aa6.5□□□□□ -1.37
PSEN1-214ENST00000555867 Q6ZS52 159 aa6.5□□□□□ -1.37
PSEN1-214ENST00000555867 CHST9Q7L1S5 443 aa6.5□□□□□ -1.37
PSEN1-214ENST00000555867 SETD3Q86TU7 594 aaPredicted RBP6.5□□□□□ -1.37
PSEN1-214ENST00000555867 MTDHQ86UE4 582 aaKnown RBP6.5□□□□□ -1.37
PSEN1-214ENST00000555867 ZC3HC1Q86WB0 502 aaKnown RBP6.5□□□□□ -1.37
PSEN1-214ENST00000555867 ARID3BQ8IVW6 561 aaPredicted RBP6.5□□□□□ -1.37
PSEN1-214ENST00000555867 AFAP1L2Q8N4X5 818 aa6.5□□□□□ -1.37
PSEN1-214ENST00000555867 ATAD1Q8NBU5 361 aa6.5□□□□□ -1.37
PSEN1-214ENST00000555867 C2CD4AQ8NCU7 369 aaPredicted RBP6.5□□□□□ -1.37
PSEN1-214ENST00000555867 ZNF417Q8TAU3 575 aa6.5□□□□□ -1.37
PSEN1-214ENST00000555867 USP33Q8TEY7 942 aa6.5□□□□□ -1.37
PSEN1-214ENST00000555867 PDCD6IPQ8WUM4 868 aaKnown RBP6.5□□□□□ -1.37
PSEN1-214ENST00000555867 ING5Q8WYH8 240 aa6.5□□□□□ -1.37
PSEN1-214ENST00000555867 MFSD3Q96ES6 412 aa6.5□□□□□ -1.37
PSEN1-214ENST00000555867 TRMT2BQ96GJ1 504 aaKnown RBP6.5□□□□□ -1.37
PSEN1-214ENST00000555867 NSL1Q96IY1 281 aa6.5□□□□□ -1.37
PSEN1-214ENST00000555867 FEM1CQ96JP0 617 aa6.5□□□□□ -1.37
PSEN1-214ENST00000555867 ANKRD27Q96NW4 1050 aa6.5□□□□□ -1.37
PSEN1-214ENST00000555867 RPRD1AQ96P16 312 aaPredicted RBP6.5□□□□□ -1.37
PSEN1-214ENST00000555867 FCRL3Q96P31 734 aaPredicted RBP6.5□□□□□ -1.37
PSEN1-214ENST00000555867 PGLYRP2Q96PD5 576 aa6.5□□□□□ -1.37
PSEN1-214ENST00000555867 ZNF587Q96SQ5 575 aaPredicted RBP6.5□□□□□ -1.37
PSEN1-214ENST00000555867 KCNK13Q9HB14 408 aa6.5□□□□□ -1.37
PSEN1-214ENST00000555867 NMRAL1Q9HBL8 299 aa6.5□□□□□ -1.37
PSEN1-214ENST00000555867 ATP13A1Q9HD20 1204 aa6.5□□□□□ -1.37
PSEN1-214ENST00000555867 CHRAC1Q9NRG0 131 aa6.5□□□□□ -1.37
PSEN1-214ENST00000555867 IARS2Q9NSE4 1012 aaKnown RBP6.5□□□□□ -1.37
PSEN1-214ENST00000555867 TREX1Q9NSU2 369 aa6.5□□□□□ -1.37
PSEN1-214ENST00000555867 SDAD1Q9NVU7 687 aaKnown RBP eCLIP6.5□□□□□ -1.37
PSEN1-214ENST00000555867 HCFC1R1Q9NWW0 138 aa6.5□□□□□ -1.37
PSEN1-214ENST00000555867 DNAJC28Q9NX36 388 aa6.5□□□□□ -1.37
PSEN1-214ENST00000555867 TRPM5Q9NZQ8 1165 aa6.5□□□□□ -1.37
PSEN1-214ENST00000555867 MPP6Q9NZW5 540 aa6.5□□□□□ -1.37
PSEN1-214ENST00000555867 HEY2Q9UBP5 337 aa6.5□□□□□ -1.37
PSEN1-214ENST00000555867 MSRB2Q9Y3D2 182 aa6.5□□□□□ -1.37
PSEN1-214ENST00000555867 SNX10Q9Y5X0 201 aa6.5□□□□□ -1.37
PSEN1-214ENST00000555867 PSAT1Q9Y617 370 aa6.5□□□□□ -1.37
PSEN1-214ENST00000555867 GPC6Q9Y625 555 aaPredicted RBP6.5□□□□□ -1.37
PSEN1-214ENST00000555867 HELZP42694 1942 aaKnown RBP6.5□□□□□ -1.37
PSEN1-214ENST00000555867 KALRNO60229 2985 aa6.5□□□□□ -1.37
PSEN1-214ENST00000555867 AHCTF1Q8WYP5 2266 aa6.5□□□□□ -1.37
PSEN1-214ENST00000555867 A0A1B0GVM2 712 aa6.49□□□□□ -1.37
PSEN1-214ENST00000555867 CCDC189A1A4V9 331 aa6.49□□□□□ -1.37
PSEN1-214ENST00000555867 TYW5A2RUC4 315 aaKnown RBP6.49□□□□□ -1.37
PSEN1-214ENST00000555867 TCAF2A6NFQ2 919 aa6.49□□□□□ -1.37
PSEN1-214ENST00000555867 FAM229AH3BQW9 127 aa6.49□□□□□ -1.37
PSEN1-214ENST00000555867 FCHO1O14526 889 aa6.49□□□□□ -1.37
PSEN1-214ENST00000555867 PFDN6O15212 129 aa6.49□□□□□ -1.37
PSEN1-214ENST00000555867 SLC22A2O15244 555 aa6.49□□□□□ -1.37
PSEN1-214ENST00000555867 CCL16O15467 120 aa6.49□□□□□ -1.37
PSEN1-214ENST00000555867 PRAMEF11O60813 436 aa6.49□□□□□ -1.37
PSEN1-214ENST00000555867 TRIM13O60858 407 aa6.49□□□□□ -1.37
PSEN1-214ENST00000555867 C1QL1O75973 258 aa6.49□□□□□ -1.37
PSEN1-214ENST00000555867 PEX11BO96011 259 aa6.49□□□□□ -1.37
PSEN1-214ENST00000555867 MT-CYBP00156 380 aaPredicted RBP6.49□□□□□ -1.37
PSEN1-214ENST00000555867 C2P06681 752 aa6.49□□□□□ -1.37
PSEN1-214ENST00000555867 SERPINF2P08697 491 aa6.49□□□□□ -1.37
PSEN1-214ENST00000555867 ESRRAP11474 423 aaPredicted RBP6.49□□□□□ -1.37
PSEN1-214ENST00000555867 FGF3P11487 239 aaPredicted RBP6.49□□□□□ -1.37
PSEN1-214ENST00000555867 STMN1P16949 149 aa6.49□□□□□ -1.37
PSEN1-214ENST00000555867 NMBRP28336 390 aa6.49□□□□□ -1.37
PSEN1-214ENST00000555867 SERPINB3P29508 390 aa6.49□□□□□ -1.37
PSEN1-214ENST00000555867 OR1E1P30953 314 aa6.49□□□□□ -1.37
PSEN1-214ENST00000555867 MPLP40238 635 aa6.49□□□□□ -1.37
PSEN1-214ENST00000555867 PXNP49023 591 aaPredicted RBP6.49□□□□□ -1.37
PSEN1-214ENST00000555867 ARPP19P56211 112 aa6.49□□□□□ -1.37
PSEN1-214ENST00000555867 RAB10P61026 200 aa6.49□□□□□ -1.37
PSEN1-214ENST00000555867 ABCE1P61221 599 aaKnown RBP6.49□□□□□ -1.37
PSEN1-214ENST00000555867 NAA20P61599 178 aa6.49□□□□□ -1.37
PSEN1-214ENST00000555867 VAC14Q08AM6 782 aa6.49□□□□□ -1.37
PSEN1-214ENST00000555867 NSUN2Q08J23 767 aaKnown RBP eCLIP6.49□□□□□ -1.37
PSEN1-214ENST00000555867 GRM2Q14416 872 aa6.49□□□□□ -1.37
PSEN1-214ENST00000555867 USP10Q14694 798 aaKnown RBP6.49□□□□□ -1.37
PSEN1-214ENST00000555867 TAF12Q16514 161 aa6.49□□□□□ -1.37
PSEN1-214ENST00000555867 FSCBQ5H9T9 825 aa6.49□□□□□ -1.37
PSEN1-214ENST00000555867 RALGPS1Q5JS13 557 aa6.49□□□□□ -1.37
PSEN1-214ENST00000555867 CFAP157Q5JU67 520 aa6.49□□□□□ -1.37
PSEN1-214ENST00000555867 PRSS36Q5K4E3 855 aa6.49□□□□□ -1.37
PSEN1-214ENST00000555867 RTP2Q5QGT7 225 aa6.49□□□□□ -1.37
PSEN1-214ENST00000555867 WASHC2DQ5SRD0 308 aa6.49□□□□□ -1.37
PSEN1-214ENST00000555867 HECTD3Q5T447 861 aa6.49□□□□□ -1.37
PSEN1-214ENST00000555867 TSTD2Q5T7W7 516 aa6.49□□□□□ -1.37
PSEN1-214ENST00000555867 C6orf163Q5TEZ5 329 aa6.49□□□□□ -1.37
PSEN1-214ENST00000555867 LIPMQ5VYY2 423 aa6.49□□□□□ -1.37
PSEN1-214ENST00000555867 METTL21CQ5VZV1 264 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms