RNA–Protein interactions for RNA: ENST00000555535.1

SRP54-207, Transcript of signal recognition particle 54, humanhuman

TSL 4

Gene SRP54, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-207ENST00000555535 REEP2Q9BRK0 252 aa2.76□□□□□ -1.97
SRP54-207ENST00000555535 PLEKHA4Q9H4M7 779 aa2.76□□□□□ -1.97
SRP54-207ENST00000555535 UPF2Q9HAU5 1272 aaKnown RBP2.76□□□□□ -1.97
SRP54-207ENST00000555535 FGF22Q9HCT0 170 aa2.76□□□□□ -1.97
SRP54-207ENST00000555535 CLIP2Q9UDT6 1046 aa2.76□□□□□ -1.97
SRP54-207ENST00000555535 ACSL5Q9ULC5 683 aa2.76□□□□□ -1.97
SRP54-207ENST00000555535 C2CD2Q9Y426 696 aa2.76□□□□□ -1.97
SRP54-207ENST00000555535 COL4A4P53420 1690 aaPredicted RBP2.76□□□□□ -1.97
SRP54-207ENST00000555535 PTPRCP08575 1304 aa2.75□□□□□ -1.97
SRP54-207ENST00000555535 KLLNB2CW77 178 aa2.75□□□□□ -1.97
SRP54-207ENST00000555535 CIDEAO60543 219 aa2.75□□□□□ -1.97
SRP54-207ENST00000555535 CTSVO60911 334 aa2.75□□□□□ -1.97
SRP54-207ENST00000555535 TFP02787 698 aa2.75□□□□□ -1.97
SRP54-207ENST00000555535 FAM106CPP0CH98 169 aa2.75□□□□□ -1.97
SRP54-207ENST00000555535 GATA2P23769 480 aaPredicted RBP2.75□□□□□ -1.97
SRP54-207ENST00000555535 POU1F1P28069 291 aa2.75□□□□□ -1.97
SRP54-207ENST00000555535 SORDQ00796 357 aa2.75□□□□□ -1.97
SRP54-207ENST00000555535 TDGQ13569 410 aa2.75□□□□□ -1.97
SRP54-207ENST00000555535 RNPS1Q15287 305 aaKnown RBP2.75□□□□□ -1.97
SRP54-207ENST00000555535 TCTEX1D4Q5JR98 221 aa2.75□□□□□ -1.97
SRP54-207ENST00000555535 WDR45BQ5MNZ6 344 aa2.75□□□□□ -1.97
SRP54-207ENST00000555535 GGNBP1Q5YKI7 109 aa2.75□□□□□ -1.97
SRP54-207ENST00000555535 TRIM65Q6PJ69 517 aa2.75□□□□□ -1.97
SRP54-207ENST00000555535 BRAT1Q6PJG6 821 aa2.75□□□□□ -1.97
SRP54-207ENST00000555535 QSOX2Q6ZRP7 698 aa2.75□□□□□ -1.97
SRP54-207ENST00000555535 ADIPOR2Q86V24 386 aa2.75□□□□□ -1.97
SRP54-207ENST00000555535 BEST3Q8N1M1 668 aa2.75□□□□□ -1.97
SRP54-207ENST00000555535 C11orf65Q8NCR3 313 aa2.75□□□□□ -1.97
SRP54-207ENST00000555535 ACVR1CQ8NER5 493 aa2.75□□□□□ -1.97
SRP54-207ENST00000555535 KLHL29Q96CT2 875 aa2.75□□□□□ -1.97
SRP54-207ENST00000555535 ZNF300Q96RE9 604 aaPredicted RBP2.75□□□□□ -1.97
SRP54-207ENST00000555535 SEBOXQ9HB31 216 aaPredicted RBP2.75□□□□□ -1.97
SRP54-207ENST00000555535 ITM2CQ9NQX7 267 aa2.75□□□□□ -1.97
SRP54-207ENST00000555535 C20orf141Q9NUB4 165 aa2.75□□□□□ -1.97
SRP54-207ENST00000555535 ZCWPW2A0A1B0GU75 182 aa2.74□□□□□ -1.97
SRP54-207ENST00000555535 CDC25CP30307 473 aa2.74□□□□□ -1.97
SRP54-207ENST00000555535 HOXC8P31273 242 aa2.74□□□□□ -1.97
SRP54-207ENST00000555535 ARCN1P48444 511 aaKnown RBP2.74□□□□□ -1.97
SRP54-207ENST00000555535 KCNC3Q14003 757 aa2.74□□□□□ -1.97
SRP54-207ENST00000555535 TMEM187Q14656 261 aa2.74□□□□□ -1.97
SRP54-207ENST00000555535 PPP2R5BQ15173 497 aa2.74□□□□□ -1.97
SRP54-207ENST00000555535 HIST2H2ACQ16777 129 aaPredicted RBP2.74□□□□□ -1.97
SRP54-207ENST00000555535 TECRLQ5HYJ1 363 aa2.74□□□□□ -1.97
SRP54-207ENST00000555535 TMEM81Q6P7N7 255 aa2.74□□□□□ -1.97
SRP54-207ENST00000555535 RBMS3Q6XE24 437 aaKnown RBP2.74□□□□□ -1.97
SRP54-207ENST00000555535 RAPH1Q70E73 1250 aa2.74□□□□□ -1.97
SRP54-207ENST00000555535 ANO5Q75V66 913 aa2.74□□□□□ -1.97
SRP54-207ENST00000555535 NRROSQ86YC3 692 aa2.74□□□□□ -1.97
SRP54-207ENST00000555535 BMPERQ8N8U9 685 aa2.74□□□□□ -1.97
SRP54-207ENST00000555535 TNIP2Q8NFZ5 429 aa2.74□□□□□ -1.97
SRP54-207ENST00000555535 SLC38A5Q8WUX1 472 aa2.74□□□□□ -1.97
SRP54-207ENST00000555535 ORAI1Q96D31 301 aa2.74□□□□□ -1.97
SRP54-207ENST00000555535 SENP5Q96HI0 755 aaPredicted RBP2.74□□□□□ -1.97
SRP54-207ENST00000555535 SLC41A2Q96JW4 573 aa2.74□□□□□ -1.97
SRP54-207ENST00000555535 FAM110AQ9BQ89 295 aa2.74□□□□□ -1.97
SRP54-207ENST00000555535 NEURL2Q9BR09 285 aa2.74□□□□□ -1.97
SRP54-207ENST00000555535 BEX4Q9NWD9 120 aaPredicted RBP2.74□□□□□ -1.97
SRP54-207ENST00000555535 MAP3K20Q9NYL2 800 aaKnown RBP2.74□□□□□ -1.97
SRP54-207ENST00000555535 RASAL2Q9UJF2 1139 aa2.74□□□□□ -1.97
SRP54-207ENST00000555535 GOLGA6L10A0A0M3HER8 536 aa2.73□□□□□ -1.97
SRP54-207ENST00000555535 C5orf60A6NFR6 353 aa2.73□□□□□ -1.97
SRP54-207ENST00000555535 TAF4O00268 1085 aa2.73□□□□□ -1.97
SRP54-207ENST00000555535 ACADSP16219 412 aa2.73□□□□□ -1.97
SRP54-207ENST00000555535 POLR2CP19387 275 aaPredicted RBP2.73□□□□□ -1.97
SRP54-207ENST00000555535 CEACAM8P31997 349 aaPredicted RBP2.73□□□□□ -1.97
SRP54-207ENST00000555535 NAE1Q13564 534 aa2.73□□□□□ -1.97
SRP54-207ENST00000555535 MORC3Q14149 939 aa2.73□□□□□ -1.97
SRP54-207ENST00000555535 ZC2HC1CQ53FD0 456 aaPredicted RBP2.73□□□□□ -1.97
SRP54-207ENST00000555535 TMEM35AQ53FP2 167 aa2.73□□□□□ -1.97
SRP54-207ENST00000555535 ZNF766Q5HY98 468 aa2.73□□□□□ -1.97
SRP54-207ENST00000555535 ANKRD45Q5TZF3 282 aa2.73□□□□□ -1.97
SRP54-207ENST00000555535 ANO1Q5XXA6 986 aa2.73□□□□□ -1.97
SRP54-207ENST00000555535 TTI2Q6NXR4 508 aa2.73□□□□□ -1.97
SRP54-207ENST00000555535 ZNF790Q6PG37 636 aa2.73□□□□□ -1.97
SRP54-207ENST00000555535 SLC46A3Q7Z3Q1 461 aa2.73□□□□□ -1.97
SRP54-207ENST00000555535 ADSSL1Q8N142 457 aa2.73□□□□□ -1.97
SRP54-207ENST00000555535 TBC1D20Q96BZ9 403 aa2.73□□□□□ -1.97
SRP54-207ENST00000555535 ARHGEF26Q96DR7 871 aa2.73□□□□□ -1.97
SRP54-207ENST00000555535 PABPC5Q96DU9 382 aaKnown RBP2.73□□□□□ -1.97
SRP54-207ENST00000555535 QRFPRQ96P65 431 aa2.73□□□□□ -1.97
SRP54-207ENST00000555535 DISP3Q9P2K9 1392 aa2.73□□□□□ -1.97
SRP54-207ENST00000555535 EIF3DO15371 548 aaKnown RBP eCLIP2.72□□□□□ -1.97
SRP54-207ENST00000555535 SEC14L5O43304 696 aa2.72□□□□□ -1.97
SRP54-207ENST00000555535 TSPAN3O60637 253 aa2.72□□□□□ -1.97
SRP54-207ENST00000555535 SHC1P29353 583 aa2.72□□□□□ -1.97
SRP54-207ENST00000555535 PTGER3P43115 390 aa2.72□□□□□ -1.97
SRP54-207ENST00000555535 AMPHP49418 695 aa2.72□□□□□ -1.97
SRP54-207ENST00000555535 CSNK2A1P68400 391 aaPredicted RBP2.72□□□□□ -1.97
SRP54-207ENST00000555535 SPOCK1Q08629 439 aa2.72□□□□□ -1.97
SRP54-207ENST00000555535 SLC12A1Q13621 1099 aa2.72□□□□□ -1.97
SRP54-207ENST00000555535 UBE4AQ14139 1066 aa2.72□□□□□ -1.97
SRP54-207ENST00000555535 CROCCQ5TZA2 2017 aa2.72□□□□□ -1.97
SRP54-207ENST00000555535 FAM198BQ6UWH4 519 aa2.72□□□□□ -1.97
SRP54-207ENST00000555535 BBS12Q6ZW61 710 aa2.72□□□□□ -1.97
SRP54-207ENST00000555535 LRRTM1Q86UE6 522 aa2.72□□□□□ -1.97
SRP54-207ENST00000555535 CCDC146Q8IYE0 955 aa2.72□□□□□ -1.97
SRP54-207ENST00000555535 CSNK2A3Q8NEV1 391 aa2.72□□□□□ -1.97
SRP54-207ENST00000555535 PPP1R13BQ96KQ4 1090 aa2.72□□□□□ -1.97
SRP54-207ENST00000555535 PCGF6Q9BYE7 350 aa2.72□□□□□ -1.97
SRP54-207ENST00000555535 POLG2Q9UHN1 485 aa2.72□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 56.8 ms