RNA–Protein interactions for RNA: ENST00000555416.5

SNX6-203, Transcript of sorting nexin 6, humanhuman

TSL 1 (best)

Gene SNX6, Length 1,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-203ENST00000555416 ARL10Q8N8L6 244 aa13.57□□□□□ -0.24
SNX6-203ENST00000555416 DCBLD1Q8N8Z6 715 aa13.57□□□□□ -0.24
SNX6-203ENST00000555416 KDF1Q8NAX2 398 aaPredicted RBP13.57□□□□□ -0.24
SNX6-203ENST00000555416 PATE1Q8WXA2 126 aa13.57□□□□□ -0.24
SNX6-203ENST00000555416 SPATA16Q9BXB7 569 aa13.57□□□□□ -0.24
SNX6-203ENST00000555416 TLR10Q9BXR5 811 aa13.57□□□□□ -0.24
SNX6-203ENST00000555416 KCNF1Q9H3M0 494 aa13.57□□□□□ -0.24
SNX6-203ENST00000555416 KCTD3Q9Y597 815 aa13.57□□□□□ -0.24
SNX6-203ENST00000555416 PCDHB1Q9Y5F3 818 aa13.57□□□□□ -0.24
SNX6-203ENST00000555416 RGSL1A5PLK6 1076 aa13.56□□□□□ -0.24
SNX6-203ENST00000555416 C5orf60A6NFR6 353 aa13.56□□□□□ -0.24
SNX6-203ENST00000555416 B4DGG1 531 aa13.56□□□□□ -0.24
SNX6-203ENST00000555416 GAPDHSO14556 408 aaPredicted RBP13.56□□□□□ -0.24
SNX6-203ENST00000555416 ASMTLO95671 621 aa13.56□□□□□ -0.24
SNX6-203ENST00000555416 EML2O95834 649 aa13.56□□□□□ -0.24
SNX6-203ENST00000555416 FGF1P05230 155 aa13.56□□□□□ -0.24
SNX6-203ENST00000555416 GP1BAP07359 652 aa13.56□□□□□ -0.24
SNX6-203ENST00000555416 CDK4P11802 303 aa13.56□□□□□ -0.24
SNX6-203ENST00000555416 MAZP56270 477 aaKnown RBP13.56□□□□□ -0.24
SNX6-203ENST00000555416 DCDC1P59894 354 aa13.56□□□□□ -0.24
SNX6-203ENST00000555416 E2F1Q01094 437 aa13.56□□□□□ -0.24
SNX6-203ENST00000555416 RPS6KA1Q15418 735 aa13.56□□□□□ -0.24
SNX6-203ENST00000555416 SIX1Q15475 284 aaPredicted RBP13.56□□□□□ -0.24
SNX6-203ENST00000555416 ITPRIPL1Q6GPH6 555 aa13.56□□□□□ -0.24
SNX6-203ENST00000555416 CCDC70Q6NSX1 233 aa13.56□□□□□ -0.24
SNX6-203ENST00000555416 SLC30A9Q6PML9 568 aa13.56□□□□□ -0.24
SNX6-203ENST00000555416 PRUNE1Q86TP1 453 aa13.56□□□□□ -0.24
SNX6-203ENST00000555416 SLC13A5Q86YT5 568 aaPredicted RBP13.56□□□□□ -0.24
SNX6-203ENST00000555416 KLHDC8BQ8IXV7 354 aa13.56□□□□□ -0.24
SNX6-203ENST00000555416 SDR16C5Q8N3Y7 309 aa13.56□□□□□ -0.24
SNX6-203ENST00000555416 TTC13Q8NBP0 860 aa13.56□□□□□ -0.24
SNX6-203ENST00000555416 SPDYE1Q8NFV5 336 aaPredicted RBP13.56□□□□□ -0.24
SNX6-203ENST00000555416 MAPK15Q8TD08 544 aa13.56□□□□□ -0.24
SNX6-203ENST00000555416 BLOC1S5Q8TDH9 187 aa13.56□□□□□ -0.24
SNX6-203ENST00000555416 C1orf54Q8WWF1 131 aa13.56□□□□□ -0.24
SNX6-203ENST00000555416 ZCCHC14Q8WYQ9 949 aaKnown RBP13.56□□□□□ -0.24
SNX6-203ENST00000555416 CCDC74AQ96AQ1 378 aa13.56□□□□□ -0.24
SNX6-203ENST00000555416 OR2M4Q96R27 311 aa13.56□□□□□ -0.24
SNX6-203ENST00000555416 IL26Q9NPH9 171 aa13.56□□□□□ -0.24
SNX6-203ENST00000555416 TRNAU1APQ9NX07 287 aaKnown RBP13.56□□□□□ -0.24
SNX6-203ENST00000555416 IL17CQ9P0M4 197 aa13.56□□□□□ -0.24
SNX6-203ENST00000555416 TAAR2Q9P1P5 351 aa13.56□□□□□ -0.24
SNX6-203ENST00000555416 ATXN10Q9UBB4 475 aa13.56□□□□□ -0.24
SNX6-203ENST00000555416 NFKBIL1Q9UBC1 381 aaPredicted RBP13.56□□□□□ -0.24
SNX6-203ENST00000555416 ZMIZ1Q9ULJ6 1067 aa13.56□□□□□ -0.24
SNX6-203ENST00000555416 GPSM3Q9Y4H4 160 aa13.56□□□□□ -0.24
SNX6-203ENST00000555416 A0A1W2PNU3 283 aaPredicted RBP13.55□□□□□ -0.24
SNX6-203ENST00000555416 GOLGA6L9A6NEM1 432 aa13.55□□□□□ -0.24
SNX6-203ENST00000555416 LIASO43766 372 aa13.55□□□□□ -0.24
SNX6-203ENST00000555416 MTX2O75431 263 aa13.55□□□□□ -0.24
SNX6-203ENST00000555416 ANXA9O76027 345 aa13.55□□□□□ -0.24
SNX6-203ENST00000555416 PTMAP06454 111 aaKnown RBP13.55□□□□□ -0.24
SNX6-203ENST00000555416 PYGLP06737 847 aa13.55□□□□□ -0.24
SNX6-203ENST00000555416 ZNF8P17098 575 aaPredicted RBP13.55□□□□□ -0.24
SNX6-203ENST00000555416 HLA-DPA1P20036 260 aa13.55□□□□□ -0.24
SNX6-203ENST00000555416 HMGCLP35914 325 aa13.55□□□□□ -0.24
SNX6-203ENST00000555416 RPIAP49247 311 aa13.55□□□□□ -0.24
SNX6-203ENST00000555416 CYP4F3Q08477 520 aa13.55□□□□□ -0.24
SNX6-203ENST00000555416 HLTFQ14527 1009 aaKnown RBP eCLIP13.55□□□□□ -0.24
SNX6-203ENST00000555416 OASLQ15646 514 aaKnown RBP13.55□□□□□ -0.24
SNX6-203ENST00000555416 ATP13A5Q4VNC0 1218 aa13.55□□□□□ -0.24
SNX6-203ENST00000555416 KCTD11Q693B1 232 aa13.55□□□□□ -0.24
SNX6-203ENST00000555416 ADGRG6Q86SQ4 1221 aa13.55□□□□□ -0.24
SNX6-203ENST00000555416 TRAM1L1Q8N609 369 aa13.55□□□□□ -0.24
SNX6-203ENST00000555416 SCG3Q8WXD2 468 aaKnown RBP13.55□□□□□ -0.24
SNX6-203ENST00000555416 CCDC3Q9BQI4 270 aa13.55□□□□□ -0.24
SNX6-203ENST00000555416 FSD1LQ9BXM9 530 aa13.55□□□□□ -0.24
SNX6-203ENST00000555416 DPEP2Q9H4A9 486 aa13.55□□□□□ -0.24
SNX6-203ENST00000555416 NCKIPSDQ9NZQ3 722 aa13.55□□□□□ -0.24
SNX6-203ENST00000555416 ZNHIT2Q9UHR6 403 aa13.55□□□□□ -0.24
SNX6-203ENST00000555416 CLCA2Q9UQC9 943 aa13.55□□□□□ -0.24
SNX6-203ENST00000555416 ARL5AQ9Y689 179 aa13.55□□□□□ -0.24
SNX6-203ENST00000555416 RNF215Q9Y6U7 377 aa13.55□□□□□ -0.24
SNX6-203ENST00000555416 APC2O95996 2303 aa13.55□□□□□ -0.24
SNX6-203ENST00000555416 CELSR3Q9NYQ7 3312 aa13.54□□□□□ -0.24
SNX6-203ENST00000555416 A0A1W2PQM1 296 aa13.54□□□□□ -0.24
SNX6-203ENST00000555416 PMS2P1A4D2B8 440 aa13.54□□□□□ -0.24
SNX6-203ENST00000555416 UGT1A9O60656 530 aa13.54□□□□□ -0.24
SNX6-203ENST00000555416 STK10O94804 968 aaKnown RBP13.54□□□□□ -0.24
SNX6-203ENST00000555416 ETS1P14921 441 aa13.54□□□□□ -0.24
SNX6-203ENST00000555416 UGT1A6P19224 532 aa13.54□□□□□ -0.24
SNX6-203ENST00000555416 UGT1A1P22309 533 aa13.54□□□□□ -0.24
SNX6-203ENST00000555416 UGT1A4P22310 534 aa13.54□□□□□ -0.24
SNX6-203ENST00000555416 UGT1A3P35503 534 aa13.54□□□□□ -0.24
SNX6-203ENST00000555416 UGT1A5P35504 534 aa13.54□□□□□ -0.24
SNX6-203ENST00000555416 PDX1P52945 283 aa13.54□□□□□ -0.24
SNX6-203ENST00000555416 ILF3Q12906 894 aaKnown RBP eCLIP13.54□□□□□ -0.242e-7■■■■□ 19.3
SNX6-203ENST00000555416 SNX1Q13596 522 aa13.54□□□□□ -0.24
SNX6-203ENST00000555416 CHRNA6Q15825 494 aa13.54□□□□□ -0.24
SNX6-203ENST00000555416 C14orf28Q4W4Y0 310 aa13.54□□□□□ -0.24
SNX6-203ENST00000555416 ZNF569Q5MCW4 686 aa13.54□□□□□ -0.24
SNX6-203ENST00000555416 SEL1L2Q5TEA6 688 aa13.54□□□□□ -0.24
SNX6-203ENST00000555416 GLT6D1Q7Z4J2 308 aa13.54□□□□□ -0.24
SNX6-203ENST00000555416 C17orf82Q86X59 251 aaPredicted RBP13.54□□□□□ -0.24
SNX6-203ENST00000555416 GALNT13Q8IUC8 556 aa13.54□□□□□ -0.24
SNX6-203ENST00000555416 REXO1L1PQ8IX06 675 aa13.54□□□□□ -0.24
SNX6-203ENST00000555416 NAGSQ8N159 534 aa13.54□□□□□ -0.24
SNX6-203ENST00000555416 Q8N9G6 341 aaPredicted RBP13.54□□□□□ -0.24
SNX6-203ENST00000555416 GLIS1Q8NBF1 620 aa13.54□□□□□ -0.24
SNX6-203ENST00000555416 GLMNQ92990 594 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 63.4 ms