RNA–Protein interactions for RNA: ENST00000555402.1

VRK1-205, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 415 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-205ENST00000555402 PPP1R3EQ9H7J1 279 aa5.39□□□□□ -1.55
VRK1-205ENST00000555402 CLK4Q9HAZ1 481 aaKnown RBP5.39□□□□□ -1.55
VRK1-205ENST00000555402 LTB4R2Q9NPC1 389 aa5.39□□□□□ -1.55
VRK1-205ENST00000555402 CCDC177Q9NQR7 707 aaPredicted RBP5.39□□□□□ -1.55
VRK1-205ENST00000555402 COPG2Q9UBF2 871 aa5.39□□□□□ -1.55
VRK1-205ENST00000555402 OR14J1Q9UGF5 321 aa5.39□□□□□ -1.55
VRK1-205ENST00000555402 FBXW11Q9UKB1 542 aa5.39□□□□□ -1.55
VRK1-205ENST00000555402 ZNF711Q9Y462 761 aa5.39□□□□□ -1.55
VRK1-205ENST00000555402 CLIC4Q9Y696 253 aa5.39□□□□□ -1.55
VRK1-205ENST00000555402 LOC100509620A0A075B734 347 aa5.38□□□□□ -1.55
VRK1-205ENST00000555402 RPS10-NUDT3A0A1W2PQS6 291 aa5.38□□□□□ -1.55
VRK1-205ENST00000555402 C4orf47A7E2U8 309 aa5.38□□□□□ -1.55
VRK1-205ENST00000555402 TGFB3P10600 412 aa5.38□□□□□ -1.55
VRK1-205ENST00000555402 MMP9P14780 707 aa5.38□□□□□ -1.55
VRK1-205ENST00000555402 NAGAP17050 411 aa5.38□□□□□ -1.55
VRK1-205ENST00000555402 MAOAP21397 527 aa5.38□□□□□ -1.55
VRK1-205ENST00000555402 GNLYP22749 145 aa5.38□□□□□ -1.55
VRK1-205ENST00000555402 TBXAS1P24557 533 aaPredicted RBP5.38□□□□□ -1.55
VRK1-205ENST00000555402 HOXC9P31274 260 aa5.38□□□□□ -1.55
VRK1-205ENST00000555402 RPL3P39023 403 aaKnown RBP5.38□□□□□ -1.55
VRK1-205ENST00000555402 MATR3P43243 847 aaKnown RBP eCLIP5.38□□□□□ -1.55
VRK1-205ENST00000555402 CAPZA2P47755 286 aa5.38□□□□□ -1.55
VRK1-205ENST00000555402 PNLIPRP2P54317 469 aa5.38□□□□□ -1.55
VRK1-205ENST00000555402 KRTAP10-5P60370 271 aa5.38□□□□□ -1.55
VRK1-205ENST00000555402 ADORA2A-AS1P86434 159 aa5.38□□□□□ -1.55
VRK1-205ENST00000555402 C15orf59Q2T9L4 293 aaPredicted RBP5.38□□□□□ -1.55
VRK1-205ENST00000555402 ZNF585BQ52M93 769 aa5.38□□□□□ -1.55
VRK1-205ENST00000555402 ADGRA1Q86SQ6 560 aa5.38□□□□□ -1.55
VRK1-205ENST00000555402 SDCCAG8Q86SQ7 713 aaPredicted RBP5.38□□□□□ -1.55
VRK1-205ENST00000555402 EPHX4Q8IUS5 362 aa5.38□□□□□ -1.55
VRK1-205ENST00000555402 POGLUT1Q8NBL1 392 aa5.38□□□□□ -1.55
VRK1-205ENST00000555402 KRTAP4-4Q9BYR3 166 aa5.38□□□□□ -1.55
VRK1-205ENST00000555402 PIGMQ9H3S5 423 aa5.38□□□□□ -1.55
VRK1-205ENST00000555402 RABEP2Q9H5N1 569 aa5.38□□□□□ -1.55
VRK1-205ENST00000555402 ACSS1Q9NUB1 689 aaPredicted RBP5.38□□□□□ -1.55
VRK1-205ENST00000555402 PAG1Q9NWQ8 432 aa5.38□□□□□ -1.55
VRK1-205ENST00000555402 PSD3Q9NYI0 1048 aa5.38□□□□□ -1.55
VRK1-205ENST00000555402 MARCH4Q9P2E8 410 aaPredicted RBP5.38□□□□□ -1.55
VRK1-205ENST00000555402 SLC9A2Q9UBY0 812 aa5.38□□□□□ -1.55
VRK1-205ENST00000555402 ZHX1Q9UKY1 873 aaPredicted RBP5.38□□□□□ -1.55
VRK1-205ENST00000555402 PADI1Q9ULC6 663 aa5.38□□□□□ -1.55
VRK1-205ENST00000555402 CDC14AQ9UNH5 594 aa5.38□□□□□ -1.55
VRK1-205ENST00000555402 EXO1Q9UQ84 846 aaKnown RBP5.38□□□□□ -1.55
VRK1-205ENST00000555402 RAI2Q9Y5P3 530 aa5.38□□□□□ -1.55
VRK1-205ENST00000555402 A0A1B0GVM2 712 aa5.37□□□□□ -1.55
VRK1-205ENST00000555402 A6NL46 340 aa5.37□□□□□ -1.55
VRK1-205ENST00000555402 BECN2A8MW95 431 aa5.37□□□□□ -1.55
VRK1-205ENST00000555402 VWA5AO00534 786 aa5.37□□□□□ -1.55
VRK1-205ENST00000555402 TIMM23O14925 209 aa5.37□□□□□ -1.55
VRK1-205ENST00000555402 ASAP2O43150 1006 aa5.37□□□□□ -1.55
VRK1-205ENST00000555402 ZIC3O60481 467 aa5.37□□□□□ -1.55
VRK1-205ENST00000555402 VNN2O95498 520 aa5.37□□□□□ -1.55
VRK1-205ENST00000555402 DDX5P17844 614 aaKnown RBP5.37□□□□□ -1.55
VRK1-205ENST00000555402 UBA1P22314 1058 aaKnown RBP5.37□□□□□ -1.55
VRK1-205ENST00000555402 ACADLP28330 430 aa5.37□□□□□ -1.55
VRK1-205ENST00000555402 MSH2P43246 934 aa5.37□□□□□ -1.55
VRK1-205ENST00000555402 TMF1P82094 1093 aa5.37□□□□□ -1.55
VRK1-205ENST00000555402 POU5F1Q01860 360 aaKnown RBP5.37□□□□□ -1.55
VRK1-205ENST00000555402 GRIK2Q13002 908 aa5.37□□□□□ -1.55
VRK1-205ENST00000555402 CTTNQ14247 550 aaKnown RBP5.37□□□□□ -1.55
VRK1-205ENST00000555402 FSCBQ5H9T9 825 aa5.37□□□□□ -1.55
VRK1-205ENST00000555402 DNTTIP2Q5QJE6 756 aaKnown RBP5.37□□□□□ -1.55
VRK1-205ENST00000555402 DAB2IPQ5VWQ8 1189 aa5.37□□□□□ -1.55
VRK1-205ENST00000555402 TYW3Q6IPR3 259 aaKnown RBP5.37□□□□□ -1.55
VRK1-205ENST00000555402 COLCA1Q6ZS62 124 aa5.37□□□□□ -1.55
VRK1-205ENST00000555402 TAOK1Q7L7X3 1001 aa5.37□□□□□ -1.55
VRK1-205ENST00000555402 AACSQ86V21 672 aa5.37□□□□□ -1.55
VRK1-205ENST00000555402 PELI3Q8N2H9 469 aa5.37□□□□□ -1.55
VRK1-205ENST00000555402 LRRC59Q96AG4 307 aaKnown RBP5.37□□□□□ -1.55
VRK1-205ENST00000555402 ZMAT2Q96NC0 199 aaKnown RBP5.37□□□□□ -1.55
VRK1-205ENST00000555402 KXD1Q9BQD3 176 aa5.37□□□□□ -1.55
VRK1-205ENST00000555402 DNAJC18Q9H819 358 aa5.37□□□□□ -1.55
VRK1-205ENST00000555402 MTMR10Q9NXD2 777 aa5.37□□□□□ -1.55
VRK1-205ENST00000555402 IL36RNQ9UBH0 155 aa5.37□□□□□ -1.55
VRK1-205ENST00000555402 GIMAP2Q9UG22 337 aa5.37□□□□□ -1.55
VRK1-205ENST00000555402 ZNF644Q9H582 1327 aaPredicted RBP5.37□□□□□ -1.55
VRK1-205ENST00000555402 H7C0S8 307 aa5.36□□□□□ -1.55
VRK1-205ENST00000555402 J3KR12 359 aa5.36□□□□□ -1.55
VRK1-205ENST00000555402 UBE2CO00762 179 aa5.36□□□□□ -1.55
VRK1-205ENST00000555402 ADAMDEC1O15204 470 aa5.36□□□□□ -1.55
VRK1-205ENST00000555402 PAPSS1O43252 624 aaPredicted RBP5.36□□□□□ -1.55
VRK1-205ENST00000555402 CSPG5O95196 566 aa5.36□□□□□ -1.55
VRK1-205ENST00000555402 EGFP01133 1207 aa5.36□□□□□ -1.55
VRK1-205ENST00000555402 ABCB1P08183 1280 aaPredicted RBP5.36□□□□□ -1.55
VRK1-205ENST00000555402 KRTAP5-9P26371 169 aa5.36□□□□□ -1.55
VRK1-205ENST00000555402 HNRNPH1P31943 449 aaKnown RBP5.36□□□□□ -1.55
VRK1-205ENST00000555402 STX2P32856 288 aa5.36□□□□□ -1.55
VRK1-205ENST00000555402 SUOXP51687 545 aa5.36□□□□□ -1.55
VRK1-205ENST00000555402 GPR143P51810 404 aa5.36□□□□□ -1.55
VRK1-205ENST00000555402 RAD23BP54727 409 aa5.36□□□□□ -1.55
VRK1-205ENST00000555402 TRAF1Q13077 416 aa5.36□□□□□ -1.55
VRK1-205ENST00000555402 DLG2Q15700 870 aa5.36□□□□□ -1.55
VRK1-205ENST00000555402 ZNF805Q5CZA5 627 aa5.36□□□□□ -1.55
VRK1-205ENST00000555402 FNBP1LQ5T0N5 605 aa5.36□□□□□ -1.55
VRK1-205ENST00000555402 RARS2Q5T160 578 aaKnown RBP5.36□□□□□ -1.55
VRK1-205ENST00000555402 ADALQ6DHV7 355 aa5.36□□□□□ -1.55
VRK1-205ENST00000555402 SLC36A4Q6YBV0 504 aa5.36□□□□□ -1.55
VRK1-205ENST00000555402 TSPAN33Q86UF1 283 aa5.36□□□□□ -1.55
VRK1-205ENST00000555402 CCDC190Q86UF4 302 aa5.36□□□□□ -1.55
VRK1-205ENST00000555402 ZC3HC1Q86WB0 502 aaKnown RBP5.36□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms