RNA–Protein interactions for RNA: ENST00000555351.1

VRK1-204, Transcript of vaccinia related kinase 1, humanhuman

TSL 2

Gene VRK1, Length 667 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-204ENST00000555351 PLD2O14939 933 aa11.74□□□□□ -0.53
VRK1-204ENST00000555351 ECEL1O95672 775 aa11.74□□□□□ -0.53
VRK1-204ENST00000555351 CPNE6O95741 557 aa11.74□□□□□ -0.53
VRK1-204ENST00000555351 TNNT1P13805 278 aa11.74□□□□□ -0.53
VRK1-204ENST00000555351 SLC2A4P14672 509 aa11.74□□□□□ -0.53
VRK1-204ENST00000555351 PECAM1P16284 738 aaPredicted RBP11.74□□□□□ -0.53
VRK1-204ENST00000555351 CTNNA2P26232 953 aa11.74□□□□□ -0.53
VRK1-204ENST00000555351 AK4P27144 223 aaPredicted RBP11.74□□□□□ -0.53
VRK1-204ENST00000555351 CETN2P41208 172 aa11.74□□□□□ -0.53
VRK1-204ENST00000555351 ACTR1BP42025 376 aa11.74□□□□□ -0.53
VRK1-204ENST00000555351 TNNT3P45378 269 aaPredicted RBP11.74□□□□□ -0.53
VRK1-204ENST00000555351 VAV2P52735 878 aa11.74□□□□□ -0.53
VRK1-204ENST00000555351 ACTR1AP61163 376 aa11.74□□□□□ -0.53
VRK1-204ENST00000555351 TLE3Q04726 772 aa11.74□□□□□ -0.53
VRK1-204ENST00000555351 TRA2AQ13595 282 aaKnown RBP eCLIP11.74□□□□□ -0.53
VRK1-204ENST00000555351 GALNT3Q14435 633 aa11.74□□□□□ -0.53
VRK1-204ENST00000555351 TCEA2Q15560 299 aa11.74□□□□□ -0.53
VRK1-204ENST00000555351 ZNF569Q5MCW4 686 aa11.74□□□□□ -0.53
VRK1-204ENST00000555351 BROXQ5VW32 411 aa11.74□□□□□ -0.53
VRK1-204ENST00000555351 SLC30A9Q6PML9 568 aa11.74□□□□□ -0.53
VRK1-204ENST00000555351 RAB11FIP2Q7L804 512 aa11.74□□□□□ -0.53
VRK1-204ENST00000555351 LYSMD3Q7Z3D4 306 aa11.74□□□□□ -0.53
VRK1-204ENST00000555351 PIM3Q86V86 326 aa11.74□□□□□ -0.53
VRK1-204ENST00000555351 CCDC50Q8IVM0 306 aa11.74□□□□□ -0.53
VRK1-204ENST00000555351 SPACA3Q8IXA5 215 aa11.74□□□□□ -0.53
VRK1-204ENST00000555351 NAGSQ8N159 534 aa11.74□□□□□ -0.53
VRK1-204ENST00000555351 TRAM1L1Q8N609 369 aa11.74□□□□□ -0.53
VRK1-204ENST00000555351 LSM14AQ8ND56 463 aaKnown RBP11.74□□□□□ -0.53
VRK1-204ENST00000555351 HTR3CQ8WXA8 447 aa11.74□□□□□ -0.53
VRK1-204ENST00000555351 EID2BQ96D98 161 aa11.74□□□□□ -0.53
VRK1-204ENST00000555351 GPR63Q9BZJ6 419 aa11.74□□□□□ -0.53
VRK1-204ENST00000555351 PRORYQ9H606 182 aa11.74□□□□□ -0.53
VRK1-204ENST00000555351 TRIM39Q9HCM9 518 aa11.74□□□□□ -0.53
VRK1-204ENST00000555351 SAE1Q9UBE0 346 aaPredicted RBP11.74□□□□□ -0.53
VRK1-204ENST00000555351 TMEM98Q9Y2Y6 226 aa11.74□□□□□ -0.53
VRK1-204ENST00000555351 ZNF711Q9Y462 761 aa11.74□□□□□ -0.53
VRK1-204ENST00000555351 SOWAHDA6NJG2 315 aa11.73□□□□□ -0.53
VRK1-204ENST00000555351 OR5K4A6NMS3 321 aa11.73□□□□□ -0.53
VRK1-204ENST00000555351 HGSO14964 777 aaPredicted RBP11.73□□□□□ -0.53
VRK1-204ENST00000555351 INPP4BO15327 924 aa11.73□□□□□ -0.53
VRK1-204ENST00000555351 NVLO15381 856 aaKnown RBP11.73□□□□□ -0.53
VRK1-204ENST00000555351 B4GAT1O43505 415 aa11.73□□□□□ -0.53
VRK1-204ENST00000555351 VEGFDO43915 354 aa11.73□□□□□ -0.53
VRK1-204ENST00000555351 NUAK1O60285 661 aa11.73□□□□□ -0.53
VRK1-204ENST00000555351 PPFIA2O75334 1257 aa11.73□□□□□ -0.53
VRK1-204ENST00000555351 ASMTLO95671 621 aa11.73□□□□□ -0.53
VRK1-204ENST00000555351 MT-CYBP00156 380 aaPredicted RBP11.73□□□□□ -0.53
VRK1-204ENST00000555351 HLA-DPA1P20036 260 aa11.73□□□□□ -0.53
VRK1-204ENST00000555351 ITPKBP27987 946 aa11.73□□□□□ -0.53
VRK1-204ENST00000555351 CDC25BP30305 580 aa11.73□□□□□ -0.53
VRK1-204ENST00000555351 CD68P34810 354 aaPredicted RBP11.73□□□□□ -0.53
VRK1-204ENST00000555351 HMGCLP35914 325 aa11.73□□□□□ -0.53
VRK1-204ENST00000555351 GPLD1P80108 840 aa11.73□□□□□ -0.53
VRK1-204ENST00000555351 ADCY2Q08462 1091 aa11.73□□□□□ -0.53
VRK1-204ENST00000555351 MPP3Q13368 585 aa11.73□□□□□ -0.53
VRK1-204ENST00000555351 NOMO1Q15155 1222 aa11.73□□□□□ -0.53
VRK1-204ENST00000555351 KAZNQ674X7 775 aa11.73□□□□□ -0.53
VRK1-204ENST00000555351 DOK6Q6PKX4 331 aa11.73□□□□□ -0.53
VRK1-204ENST00000555351 KDELC1Q6UW63 502 aa11.73□□□□□ -0.53
VRK1-204ENST00000555351 B3GNT8Q7Z7M8 397 aa11.73□□□□□ -0.53
VRK1-204ENST00000555351 SLITRK4Q8IW52 837 aa11.73□□□□□ -0.53
VRK1-204ENST00000555351 SFRP1Q8N474 314 aa11.73□□□□□ -0.53
VRK1-204ENST00000555351 FBXO39Q8N4B4 442 aa11.73□□□□□ -0.53
VRK1-204ENST00000555351 SPATA22Q8NHS9 363 aa11.73□□□□□ -0.53
VRK1-204ENST00000555351 PTCD2Q8WV60 388 aaKnown RBP11.73□□□□□ -0.53
VRK1-204ENST00000555351 SNRNP27Q8WVK2 155 aaKnown RBP11.73□□□□□ -0.53
VRK1-204ENST00000555351 KCNE4Q8WWG9 221 aa11.73□□□□□ -0.53
VRK1-204ENST00000555351 SH3KBP1Q96B97 665 aa11.73□□□□□ -0.53
VRK1-204ENST00000555351 PPP1R2P1Q96PQ5 205 aa11.73□□□□□ -0.53
VRK1-204ENST00000555351 VPS35Q96QK1 796 aa11.73□□□□□ -0.53
VRK1-204ENST00000555351 CMKLR1Q99788 373 aa11.73□□□□□ -0.53
VRK1-204ENST00000555351 C19orf43Q9BQ61 176 aa11.73□□□□□ -0.53
VRK1-204ENST00000555351 HERPUD2Q9BSE4 406 aa11.73□□□□□ -0.53
VRK1-204ENST00000555351 CEP41Q9BYV8 373 aa11.73□□□□□ -0.53
VRK1-204ENST00000555351 GOLPH3Q9H4A6 298 aa11.73□□□□□ -0.53
VRK1-204ENST00000555351 SYNDIG1Q9H7V2 258 aa11.73□□□□□ -0.53
VRK1-204ENST00000555351 SARS2Q9NP81 518 aaKnown RBP11.73□□□□□ -0.53
VRK1-204ENST00000555351 ZNHIT2Q9UHR6 403 aa11.73□□□□□ -0.53
VRK1-204ENST00000555351 ADGRG1Q9Y653 693 aa11.73□□□□□ -0.53
VRK1-204ENST00000555351 NBEAQ8NFP9 2946 aa11.73□□□□□ -0.53
VRK1-204ENST00000555351 ZFYVE26Q68DK2 2539 aa11.73□□□□□ -0.53
VRK1-204ENST00000555351 ARHGEF17Q96PE2 2063 aaPredicted RBP11.72□□□□□ -0.53
VRK1-204ENST00000555351 KIR2DS5A0A0G2JLQ3 304 aa11.72□□□□□ -0.53
VRK1-204ENST00000555351 A0A0G2JNG1 304 aa11.72□□□□□ -0.53
VRK1-204ENST00000555351 TEX51A0A1B0GUA7 166 aa11.72□□□□□ -0.53
VRK1-204ENST00000555351 RCCD1A6NED2 376 aa11.72□□□□□ -0.53
VRK1-204ENST00000555351 KIR2DS3K7RE56 304 aa11.72□□□□□ -0.53
VRK1-204ENST00000555351 TK2O00142 265 aa11.72□□□□□ -0.53
VRK1-204ENST00000555351 CHUKO15111 745 aa11.72□□□□□ -0.53
VRK1-204ENST00000555351 PMPCBO75439 489 aa11.72□□□□□ -0.53
VRK1-204ENST00000555351 ANXA9O76027 345 aa11.72□□□□□ -0.53
VRK1-204ENST00000555351 TNFSF15O95150 251 aa11.72□□□□□ -0.53
VRK1-204ENST00000555351 SLC25A14O95258 325 aaPredicted RBP11.72□□□□□ -0.53
VRK1-204ENST00000555351 ATP1A1P05023 1023 aaKnown RBP11.72□□□□□ -0.53
VRK1-204ENST00000555351 NFKB1P19838 968 aa11.72□□□□□ -0.53
VRK1-204ENST00000555351 UGT1A5P35504 534 aa11.72□□□□□ -0.53
VRK1-204ENST00000555351 MARCKSL1P49006 195 aa11.72□□□□□ -0.53
VRK1-204ENST00000555351 MAZP56270 477 aaKnown RBP11.72□□□□□ -0.53
VRK1-204ENST00000555351 WNT3AP56704 352 aa11.72□□□□□ -0.53
VRK1-204ENST00000555351 RWDD2BP57060 319 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms