RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 BNC1Q01954 994 aa12.59□□□□□ -0.39
SYNE2-219ENST00000555323 PDIA2Q13087 525 aaKnown RBP12.59□□□□□ -0.39
SYNE2-219ENST00000555323 NFATC2Q13469 925 aa12.59□□□□□ -0.39
SYNE2-219ENST00000555323 NFATC4Q14934 902 aa12.59□□□□□ -0.39
SYNE2-219ENST00000555323 BBS9Q3SYG4 887 aa12.59□□□□□ -0.39
SYNE2-219ENST00000555323 TEX35Q5T0J7 233 aa12.59□□□□□ -0.39
SYNE2-219ENST00000555323 ALS2CLQ60I27 953 aa12.59□□□□□ -0.39
SYNE2-219ENST00000555323 KIAA0930Q6ICG6 404 aaPredicted RBP12.59□□□□□ -0.39
SYNE2-219ENST00000555323 CASC4Q6P4E1 433 aa12.59□□□□□ -0.39
SYNE2-219ENST00000555323 FAM151BQ6UXP7 276 aa12.59□□□□□ -0.39
SYNE2-219ENST00000555323 CEP128Q6ZU80 1094 aa12.59□□□□□ -0.39
SYNE2-219ENST00000555323 CYS1Q717R9 158 aa12.59□□□□□ -0.39
SYNE2-219ENST00000555323 HEATR4Q86WZ0 1026 aa12.59□□□□□ -0.39
SYNE2-219ENST00000555323 SPATS2Q86XZ4 545 aaKnown RBP12.59□□□□□ -0.39
SYNE2-219ENST00000555323 SLC22A18ASQ8N1D0 253 aa12.59□□□□□ -0.39
SYNE2-219ENST00000555323 GLYATL1Q969I3 302 aa12.59□□□□□ -0.39
SYNE2-219ENST00000555323 SCARF2Q96GP6 870 aaPredicted RBP12.59□□□□□ -0.39
SYNE2-219ENST00000555323 HIC2Q96JB3 615 aa12.59□□□□□ -0.39
SYNE2-219ENST00000555323 ZDHHC5Q9C0B5 715 aa12.59□□□□□ -0.39
SYNE2-219ENST00000555323 ASB8Q9H765 288 aa12.59□□□□□ -0.39
SYNE2-219ENST00000555323 WDR26Q9H7D7 661 aa12.59□□□□□ -0.39
SYNE2-219ENST00000555323 SUDS3Q9H7L9 328 aaPredicted RBP12.59□□□□□ -0.39
SYNE2-219ENST00000555323 UGT1A7Q9HAW7 530 aa12.59□□□□□ -0.39
SYNE2-219ENST00000555323 UGT1A10Q9HAW8 530 aa12.59□□□□□ -0.39
SYNE2-219ENST00000555323 UGT1A8Q9HAW9 530 aa12.59□□□□□ -0.39
SYNE2-219ENST00000555323 PLAC1Q9HBJ0 212 aa12.59□□□□□ -0.39
SYNE2-219ENST00000555323 TRIM39Q9HCM9 518 aa12.59□□□□□ -0.39
SYNE2-219ENST00000555323 RRAGDQ9NQL2 400 aaPredicted RBP12.59□□□□□ -0.39
SYNE2-219ENST00000555323 PHPT1Q9NRX4 125 aaPredicted RBP12.59□□□□□ -0.39
SYNE2-219ENST00000555323 ANKRD6Q9Y2G4 727 aa12.59□□□□□ -0.39
SYNE2-219ENST00000555323 OR1A2Q9Y585 309 aa12.59□□□□□ -0.39
SYNE2-219ENST00000555323 MAD1L1Q9Y6D9 718 aa12.59□□□□□ -0.39
SYNE2-219ENST00000555323 RPS6KL1Q9Y6S9 549 aa12.59□□□□□ -0.39
SYNE2-219ENST00000555323 ATXN2Q99700 1313 aaKnown RBP12.59□□□□□ -0.39
SYNE2-219ENST00000555323 CCDC78A2IDD5 438 aa12.58□□□□□ -0.4
SYNE2-219ENST00000555323 CACNB4O00305 520 aaPredicted RBP12.58□□□□□ -0.4
SYNE2-219ENST00000555323 BANF1O75531 89 aa12.58□□□□□ -0.4
SYNE2-219ENST00000555323 GOT2P00505 430 aaKnown RBP12.58□□□□□ -0.4
SYNE2-219ENST00000555323 PAMP19021 973 aa12.58□□□□□ -0.4
SYNE2-219ENST00000555323 TGM1P22735 817 aa12.58□□□□□ -0.4
SYNE2-219ENST00000555323 KELP23276 732 aa12.58□□□□□ -0.4
SYNE2-219ENST00000555323 HTR1BP28222 390 aa12.58□□□□□ -0.4
SYNE2-219ENST00000555323 TNFRSF8P28908 595 aa12.58□□□□□ -0.4
SYNE2-219ENST00000555323 FOXN2P32314 431 aa12.58□□□□□ -0.4
SYNE2-219ENST00000555323 CA5AP35218 305 aa12.58□□□□□ -0.4
SYNE2-219ENST00000555323 CTSKP43235 329 aa12.58□□□□□ -0.4
SYNE2-219ENST00000555323 PRAMEP78395 509 aa12.58□□□□□ -0.4
SYNE2-219ENST00000555323 IRX4P78413 519 aa12.58□□□□□ -0.4
SYNE2-219ENST00000555323 CACNG1Q06432 222 aa12.58□□□□□ -0.4
SYNE2-219ENST00000555323 FRG1Q14331 258 aaKnown RBP12.58□□□□□ -0.4
SYNE2-219ENST00000555323 KIF19Q2TAC6 998 aa12.58□□□□□ -0.4
SYNE2-219ENST00000555323 TRIM61Q5EBN2 209 aa12.58□□□□□ -0.4
SYNE2-219ENST00000555323 SPANXN3Q5MJ09 141 aa12.58□□□□□ -0.4
SYNE2-219ENST00000555323 TPRG1LQ5T0D9 272 aa12.58□□□□□ -0.4
SYNE2-219ENST00000555323 STEAP4Q687X5 459 aa12.58□□□□□ -0.4
SYNE2-219ENST00000555323 AFTPHQ6ULP2 937 aa12.58□□□□□ -0.4
SYNE2-219ENST00000555323 CES3Q6UWW8 571 aa12.58□□□□□ -0.4
SYNE2-219ENST00000555323 KDM7AQ6ZMT4 941 aa12.58□□□□□ -0.4
SYNE2-219ENST00000555323 DDHD1Q8NEL9 900 aa12.58□□□□□ -0.4
SYNE2-219ENST00000555323 GPR150Q8NGU9 434 aa12.58□□□□□ -0.4
SYNE2-219ENST00000555323 OR4L1Q8NH43 312 aa12.58□□□□□ -0.4
SYNE2-219ENST00000555323 SCG3Q8WXD2 468 aaKnown RBP12.58□□□□□ -0.4
SYNE2-219ENST00000555323 IFT81Q8WYA0 676 aa12.58□□□□□ -0.4
SYNE2-219ENST00000555323 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP12.58□□□□□ -0.4
SYNE2-219ENST00000555323 ULK4Q96C45 1275 aa12.58□□□□□ -0.4
SYNE2-219ENST00000555323 TRIM56Q9BRZ2 755 aaKnown RBP12.58□□□□□ -0.4
SYNE2-219ENST00000555323 ANKZF1Q9H8Y5 726 aa12.58□□□□□ -0.4
SYNE2-219ENST00000555323 MTRF1LQ9UGC7 380 aaKnown RBP12.58□□□□□ -0.4
SYNE2-219ENST00000555323 SLC17A4Q9Y2C5 497 aa12.58□□□□□ -0.4
SYNE2-219ENST00000555323 SLC30A1Q9Y6M5 507 aa12.58□□□□□ -0.4
SYNE2-219ENST00000555323 MUC6Q6W4X9 2439 aa12.58□□□□□ -0.4
SYNE2-219ENST00000555323 VPS13AQ96RL7 3174 aa12.57□□□□□ -0.4
SYNE2-219ENST00000555323 PLXNA2O75051 1894 aa12.57□□□□□ -0.4
SYNE2-219ENST00000555323 MYO15AQ9UKN7 3530 aa12.57□□□□□ -0.4
SYNE2-219ENST00000555323 A0A1B0GVT2 93 aa12.57□□□□□ -0.4
SYNE2-219ENST00000555323 TMEM202A6NGA9 273 aa12.57□□□□□ -0.4
SYNE2-219ENST00000555323 PATE3B3GLJ2 98 aa12.57□□□□□ -0.4
SYNE2-219ENST00000555323 GPR89AB7ZAQ6 455 aa12.57□□□□□ -0.4
SYNE2-219ENST00000555323 CCL22O00626 93 aa12.57□□□□□ -0.4
SYNE2-219ENST00000555323 ARHGAP33O14559 1287 aa12.57□□□□□ -0.4
SYNE2-219ENST00000555323 KHNYNO15037 678 aaKnown RBP12.57□□□□□ -0.4
SYNE2-219ENST00000555323 DFNA5O60443 496 aa12.57□□□□□ -0.4
SYNE2-219ENST00000555323 SLC25A14O95258 325 aaPredicted RBP12.57□□□□□ -0.4
SYNE2-219ENST00000555323 VAPBO95292 243 aa12.57□□□□□ -0.4
SYNE2-219ENST00000555323 CEACAM5P06731 702 aa12.57□□□□□ -0.4
SYNE2-219ENST00000555323 SYPP08247 313 aa12.57□□□□□ -0.4
SYNE2-219ENST00000555323 GPR89BP0CG08 455 aa12.57□□□□□ -0.4
SYNE2-219ENST00000555323 ITGALP20701 1170 aa12.57□□□□□ -0.4
SYNE2-219ENST00000555323 RXRGP48443 463 aa12.57□□□□□ -0.4
SYNE2-219ENST00000555323 THOP1P52888 689 aa12.57□□□□□ -0.4
SYNE2-219ENST00000555323 C21orf59P57076 290 aa12.57□□□□□ -0.4
SYNE2-219ENST00000555323 PDE1CQ14123 709 aaPredicted RBP12.57□□□□□ -0.4
SYNE2-219ENST00000555323 FZD2Q14332 565 aa12.57□□□□□ -0.4
SYNE2-219ENST00000555323 HLTFQ14527 1009 aaKnown RBP eCLIP12.57□□□□□ -0.4
SYNE2-219ENST00000555323 FASTKD3Q14CZ7 662 aaKnown RBP12.57□□□□□ -0.4
SYNE2-219ENST00000555323 CSRP2Q16527 193 aa12.57□□□□□ -0.4
SYNE2-219ENST00000555323 LDLRAP1Q5SW96 308 aa12.57□□□□□ -0.4
SYNE2-219ENST00000555323 GPRC6AQ5T6X5 926 aa12.57□□□□□ -0.4
SYNE2-219ENST00000555323 IL27RAQ6UWB1 636 aa12.57□□□□□ -0.4
SYNE2-219ENST00000555323 LAYNQ6UX15 382 aa12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms