RNA–Protein interactions for RNA: ENST00000555244.1

CPSF2-204, Transcript of cleavage and polyadenylation specific factor 2, humanhuman

TSL 3

Gene CPSF2, Length 806 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF2-204ENST00000555244 PUM1Q14671 1186 aaKnown RBP eCLIP4.27□□□□□ -1.73
CPSF2-204ENST00000555244 CAMK4Q16566 473 aa4.27□□□□□ -1.73
CPSF2-204ENST00000555244 GOLGA7BQ2TAP0 167 aa4.27□□□□□ -1.73
CPSF2-204ENST00000555244 DPCR1Q3MIW9 517 aa4.27□□□□□ -1.73
CPSF2-204ENST00000555244 PLK5Q496M5 336 aa4.27□□□□□ -1.73
CPSF2-204ENST00000555244 EOGTQ5NDL2 527 aa4.27□□□□□ -1.73
CPSF2-204ENST00000555244 C10orf120Q5SQS8 335 aa4.27□□□□□ -1.73
CPSF2-204ENST00000555244 EMC10Q5UCC4 262 aa4.27□□□□□ -1.73
CPSF2-204ENST00000555244 MED25Q71SY5 747 aa4.27□□□□□ -1.73
CPSF2-204ENST00000555244 RRAGAQ7L523 313 aa4.27□□□□□ -1.73
CPSF2-204ENST00000555244 ARCQ7LC44 396 aa4.27□□□□□ -1.73
CPSF2-204ENST00000555244 TRMT11Q7Z4G4 463 aaKnown RBP4.27□□□□□ -1.73
CPSF2-204ENST00000555244 PPP1R3BQ86XI6 285 aa4.27□□□□□ -1.73
CPSF2-204ENST00000555244 FAM114A1Q8IWE2 563 aa4.27□□□□□ -1.73
CPSF2-204ENST00000555244 UNC45BQ8IWX7 931 aa4.27□□□□□ -1.73
CPSF2-204ENST00000555244 WDTC1Q8N5D0 677 aa4.27□□□□□ -1.73
CPSF2-204ENST00000555244 ZNF557Q8N988 423 aaPredicted RBP4.27□□□□□ -1.73
CPSF2-204ENST00000555244 KDM1BQ8NB78 822 aa4.27□□□□□ -1.73
CPSF2-204ENST00000555244 ZNF397Q8NF99 534 aaPredicted RBP4.27□□□□□ -1.73
CPSF2-204ENST00000555244 UBA3Q8TBC4 463 aa4.27□□□□□ -1.73
CPSF2-204ENST00000555244 Q8TCH9 128 aa4.27□□□□□ -1.73
CPSF2-204ENST00000555244 GPT2Q8TD30 523 aa4.27□□□□□ -1.73
CPSF2-204ENST00000555244 SECISBP2LQ93073 1101 aaKnown RBP4.27□□□□□ -1.73
CPSF2-204ENST00000555244 NT5C3BQ969T7 300 aa4.27□□□□□ -1.73
CPSF2-204ENST00000555244 APIPQ96GX9 242 aa4.27□□□□□ -1.73
CPSF2-204ENST00000555244 XPO6Q96QU8 1125 aaKnown RBP4.27□□□□□ -1.73
CPSF2-204ENST00000555244 RBM15Q96T37 977 aaKnown RBP eCLIP4.27□□□□□ -1.73
CPSF2-204ENST00000555244 TUBGCP2Q9BSJ2 902 aa4.27□□□□□ -1.73
CPSF2-204ENST00000555244 TRIM62Q9BVG3 475 aa4.27□□□□□ -1.73
CPSF2-204ENST00000555244 C1orf43Q9BWL3 253 aa4.27□□□□□ -1.73
CPSF2-204ENST00000555244 NDST4Q9H3R1 872 aa4.27□□□□□ -1.73
CPSF2-204ENST00000555244 LRRC4Q9HBW1 653 aa4.27□□□□□ -1.73
CPSF2-204ENST00000555244 UBE2TQ9NPD8 197 aaPredicted RBP4.27□□□□□ -1.73
CPSF2-204ENST00000555244 THAP10Q9P2Z0 257 aaPredicted RBP4.27□□□□□ -1.73
CPSF2-204ENST00000555244 SLC8A2Q9UPR5 921 aa4.27□□□□□ -1.73
CPSF2-204ENST00000555244 GON4LQ3T8J9 2241 aa4.27□□□□□ -1.73
CPSF2-204ENST00000555244 CHD8Q9HCK8 2581 aa4.27□□□□□ -1.73
CPSF2-204ENST00000555244 CACNA1EQ15878 2313 aa4.27□□□□□ -1.73
CPSF2-204ENST00000555244 PLXND1Q9Y4D7 1925 aa4.27□□□□□ -1.73
CPSF2-204ENST00000555244 ATG2BQ96BY7 2078 aa4.26□□□□□ -1.73
CPSF2-204ENST00000555244 EML5Q05BV3 1969 aa4.26□□□□□ -1.73
CPSF2-204ENST00000555244 BCLAF3A2AJT9 711 aaKnown RBP4.26□□□□□ -1.73
CPSF2-204ENST00000555244 CDHR4A6H8M9 788 aa4.26□□□□□ -1.73
CPSF2-204ENST00000555244 TBC1D3BA6NDS4 549 aa4.26□□□□□ -1.73
CPSF2-204ENST00000555244 ANTXRLA6NF34 631 aa4.26□□□□□ -1.73
CPSF2-204ENST00000555244 DRGXA6NNA5 263 aa4.26□□□□□ -1.73
CPSF2-204ENST00000555244 KCNU1A8MYU2 1149 aa4.26□□□□□ -1.73
CPSF2-204ENST00000555244 DIRC3C9JPN6 131 aa4.26□□□□□ -1.73
CPSF2-204ENST00000555244 M0QYV0 167 aa4.26□□□□□ -1.73
CPSF2-204ENST00000555244 FOXN3O00409 490 aaPredicted RBP4.26□□□□□ -1.73
CPSF2-204ENST00000555244 MDM4O15151 490 aa4.26□□□□□ -1.73
CPSF2-204ENST00000555244 TRIM24O15164 1050 aa4.26□□□□□ -1.73
CPSF2-204ENST00000555244 RPP40O75818 363 aaKnown RBP4.26□□□□□ -1.73
CPSF2-204ENST00000555244 RHOBTB1O94844 696 aa4.26□□□□□ -1.73
CPSF2-204ENST00000555244 CHEK2O96017 543 aa4.26□□□□□ -1.73
CPSF2-204ENST00000555244 AHSGP02765 367 aa4.26□□□□□ -1.73
CPSF2-204ENST00000555244 SBK3P0C264 359 aa4.26□□□□□ -1.73
CPSF2-204ENST00000555244 KITP10721 976 aa4.26□□□□□ -1.73
CPSF2-204ENST00000555244 CD19P15391 556 aa4.26□□□□□ -1.73
CPSF2-204ENST00000555244 ZNF18P17022 549 aa4.26□□□□□ -1.73
CPSF2-204ENST00000555244 HOXD9P28356 352 aaPredicted RBP4.26□□□□□ -1.73
CPSF2-204ENST00000555244 CORO1AP31146 461 aaKnown RBP4.26□□□□□ -1.73
CPSF2-204ENST00000555244 HOXC13P31276 330 aa4.26□□□□□ -1.73
CPSF2-204ENST00000555244 HOXD12P35452 270 aa4.26□□□□□ -1.73
CPSF2-204ENST00000555244 DPP6P42658 865 aa4.26□□□□□ -1.73
CPSF2-204ENST00000555244 HARS2P49590 506 aaKnown RBP4.26□□□□□ -1.73
CPSF2-204ENST00000555244 NOMO3P69849 1222 aa4.26□□□□□ -1.73
CPSF2-204ENST00000555244 EFEMP1Q12805 493 aa4.26□□□□□ -1.73
CPSF2-204ENST00000555244 PDCLQ13371 301 aa4.26□□□□□ -1.73
CPSF2-204ENST00000555244 BYSLQ13895 437 aaKnown RBP4.26□□□□□ -1.73
CPSF2-204ENST00000555244 C5orf22Q49AR2 442 aa4.26□□□□□ -1.73
CPSF2-204ENST00000555244 MPPE1Q53F39 396 aa4.26□□□□□ -1.73
CPSF2-204ENST00000555244 USP39Q53GS9 565 aaKnown RBP4.26□□□□□ -1.73
CPSF2-204ENST00000555244 FAM133BQ5BKY9 247 aaKnown RBP4.26□□□□□ -1.73
CPSF2-204ENST00000555244 TCP11X2Q5H9J9 407 aa4.26□□□□□ -1.73
CPSF2-204ENST00000555244 SYCP2LQ5T4T6 812 aa4.26□□□□□ -1.73
CPSF2-204ENST00000555244 KLHDC7AQ5VTJ3 777 aa4.26□□□□□ -1.73
CPSF2-204ENST00000555244 NUGGCQ68CJ6 796 aa4.26□□□□□ -1.73
CPSF2-204ENST00000555244 PMS2CLQ68D20 193 aa4.26□□□□□ -1.73
CPSF2-204ENST00000555244 TMEM215Q68D42 235 aa4.26□□□□□ -1.73
CPSF2-204ENST00000555244 DENND1BQ6P3S1 775 aa4.26□□□□□ -1.73
CPSF2-204ENST00000555244 SLC26A9Q7LBE3 791 aa4.26□□□□□ -1.73
CPSF2-204ENST00000555244 APTXQ7Z2E3 356 aaKnown RBP4.26□□□□□ -1.73
CPSF2-204ENST00000555244 BNIPLQ7Z465 357 aa4.26□□□□□ -1.73
CPSF2-204ENST00000555244 ZDHHC17Q8IUH5 632 aa4.26□□□□□ -1.73
CPSF2-204ENST00000555244 SFTPA1Q8IWL2 248 aa4.26□□□□□ -1.73
CPSF2-204ENST00000555244 ABCA7Q8IZY2 2146 aa4.26□□□□□ -1.73
CPSF2-204ENST00000555244 SIX6OS1Q8N1H7 587 aa4.26□□□□□ -1.73
CPSF2-204ENST00000555244 KRT78Q8N1N4 520 aa4.26□□□□□ -1.73
CPSF2-204ENST00000555244 ZNF808Q8N4W9 903 aaPredicted RBP4.26□□□□□ -1.73
CPSF2-204ENST00000555244 DCLK2Q8N568 766 aa4.26□□□□□ -1.73
CPSF2-204ENST00000555244 ALLCQ8N6M5 410 aa4.26□□□□□ -1.73
CPSF2-204ENST00000555244 C1orf131Q8NDD1 294 aaKnown RBP4.26□□□□□ -1.73
CPSF2-204ENST00000555244 SVIPQ8NHG7 77 aa4.26□□□□□ -1.73
CPSF2-204ENST00000555244 FIBINQ8TAL6 211 aa4.26□□□□□ -1.73
CPSF2-204ENST00000555244 TBC1D15Q8TC07 691 aa4.26□□□□□ -1.73
CPSF2-204ENST00000555244 DQX1Q8TE96 717 aaKnown RBP4.26□□□□□ -1.73
CPSF2-204ENST00000555244 WFIKKN2Q8TEU8 576 aa4.26□□□□□ -1.73
CPSF2-204ENST00000555244 NDRG1Q92597 394 aaKnown RBP4.26□□□□□ -1.73
CPSF2-204ENST00000555244 SCAMP4Q969E2 229 aa4.26□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms