RNA–Protein interactions for RNA: ENST00000555114.5

NEDD1-207, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 3

Gene NEDD1, Length 731 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-207ENST00000555114 KIR2DS5A0A0G2JLQ3 304 aa15.35■□□□□ 0.05
NEDD1-207ENST00000555114 A0A0G2JNG1 304 aa15.35■□□□□ 0.05
NEDD1-207ENST00000555114 OR5K4A6NMS3 321 aa15.35■□□□□ 0.05
NEDD1-207ENST00000555114 KIR2DS3K7RE56 304 aa15.35■□□□□ 0.05
NEDD1-207ENST00000555114 DDX3XO00571 662 aaKnown RBP eCLIP15.35■□□□□ 0.053e-6■■■□□ 15.8
NEDD1-207ENST00000555114 POLR1CO15160 346 aaPredicted RBP15.35■□□□□ 0.05
NEDD1-207ENST00000555114 STK17BO94768 372 aa15.35■□□□□ 0.05
NEDD1-207ENST00000555114 NTRK1P04629 796 aa15.35■□□□□ 0.05
NEDD1-207ENST00000555114 MAPK9P45984 424 aa15.35■□□□□ 0.05
NEDD1-207ENST00000555114 ZNF165P49910 485 aa15.35■□□□□ 0.05
NEDD1-207ENST00000555114 RPL26P61254 145 aaKnown RBP15.35■□□□□ 0.05
NEDD1-207ENST00000555114 SRSF1Q07955 248 aaKnown RBP eCLIP15.35■□□□□ 0.05
NEDD1-207ENST00000555114 KIR2DS5Q14953 304 aa15.35■□□□□ 0.05
NEDD1-207ENST00000555114 NCAPHQ15003 741 aa15.35■□□□□ 0.05
NEDD1-207ENST00000555114 PTPRRQ15256 657 aa15.35■□□□□ 0.05
NEDD1-207ENST00000555114 IYDQ6PHW0 289 aa15.35■□□□□ 0.05
NEDD1-207ENST00000555114 CLEC17AQ6ZS10 378 aa15.35■□□□□ 0.05
NEDD1-207ENST00000555114 RFLNAQ6ZTI6 216 aa15.35■□□□□ 0.05
NEDD1-207ENST00000555114 LYSMD3Q7Z3D4 306 aa15.35■□□□□ 0.05
NEDD1-207ENST00000555114 PLXDC1Q8IUK5 500 aa15.35■□□□□ 0.05
NEDD1-207ENST00000555114 PHYKPLQ8IUZ5 450 aa15.35■□□□□ 0.05
NEDD1-207ENST00000555114 ESX1Q8N693 406 aa15.35■□□□□ 0.05
NEDD1-207ENST00000555114 AOPEPQ8N6M6 819 aa15.35■□□□□ 0.05
NEDD1-207ENST00000555114 CCHCR1Q8TD31 782 aa15.35■□□□□ 0.05
NEDD1-207ENST00000555114 CTRCQ99895 268 aa15.35■□□□□ 0.05
NEDD1-207ENST00000555114 PKD2L2Q9NZM6 624 aa15.35■□□□□ 0.05
NEDD1-207ENST00000555114 ANKMY1Q9P2S6 941 aa15.35■□□□□ 0.05
NEDD1-207ENST00000555114 IP6K2Q9UHH9 426 aa15.35■□□□□ 0.05
NEDD1-207ENST00000555114 RPL26L1Q9UNX3 145 aaKnown RBP15.35■□□□□ 0.05
NEDD1-207ENST00000555114 TMEM184BQ9Y519 407 aaPredicted RBP15.35■□□□□ 0.05
NEDD1-207ENST00000555114 GOLGA6L22H0YM25 854 aa15.34■□□□□ 0.05
NEDD1-207ENST00000555114 NKX2-8O15522 239 aa15.34■□□□□ 0.05
NEDD1-207ENST00000555114 SNX2O60749 519 aa15.34■□□□□ 0.05
NEDD1-207ENST00000555114 DNAJC6O75061 913 aa15.34■□□□□ 0.05
NEDD1-207ENST00000555114 ACP5P13686 325 aa15.34■□□□□ 0.05
NEDD1-207ENST00000555114 TCN2P20062 427 aa15.34■□□□□ 0.05
NEDD1-207ENST00000555114 GARSP41250 739 aaKnown RBP15.34■□□□□ 0.05
NEDD1-207ENST00000555114 SSR1P43307 286 aaKnown RBP15.34■□□□□ 0.05
NEDD1-207ENST00000555114 UBAP2LQ14157 1087 aaKnown RBP15.34■□□□□ 0.05
NEDD1-207ENST00000555114 MAP7Q14244 749 aa15.34■□□□□ 0.05
NEDD1-207ENST00000555114 HADHQ16836 314 aaKnown RBP15.34■□□□□ 0.05
NEDD1-207ENST00000555114 CRTC2Q53ET0 693 aaPredicted RBP15.34■□□□□ 0.05
NEDD1-207ENST00000555114 NIPA2Q8N8Q9 360 aa15.34■□□□□ 0.05
NEDD1-207ENST00000555114 STARD8Q92502 1023 aa15.34■□□□□ 0.05
NEDD1-207ENST00000555114 GBP4Q96PP9 640 aa15.34■□□□□ 0.05
NEDD1-207ENST00000555114 AGAP2Q99490 1192 aa15.34■□□□□ 0.05
NEDD1-207ENST00000555114 TDRD1Q9BXT4 1180 aaKnown RBP15.34■□□□□ 0.05
NEDD1-207ENST00000555114 ISCUQ9H1K1 167 aa15.34■□□□□ 0.05
NEDD1-207ENST00000555114 RTN4Q9NQC3 1192 aaKnown RBP15.34■□□□□ 0.05
NEDD1-207ENST00000555114 ZNF71Q9NQZ8 489 aaPredicted RBP15.34■□□□□ 0.05
NEDD1-207ENST00000555114 TBC1D29Q9UFV1 150 aa15.34■□□□□ 0.05
NEDD1-207ENST00000555114 KLHL3Q9UH77 587 aa15.34■□□□□ 0.05
NEDD1-207ENST00000555114 KCNK6Q9Y257 313 aa15.34■□□□□ 0.05
NEDD1-207ENST00000555114 CHKBQ9Y259 395 aa15.34■□□□□ 0.05
NEDD1-207ENST00000555114 PCDHB3Q9Y5E6 796 aa15.34■□□□□ 0.05
NEDD1-207ENST00000555114 UBR5O95071 2799 aaPredicted RBP15.33■□□□□ 0.04
NEDD1-207ENST00000555114 PTPN13Q12923 2485 aa15.33■□□□□ 0.04
NEDD1-207ENST00000555114 A0A0U1RQS6 177 aa15.33■□□□□ 0.04
NEDD1-207ENST00000555114 C1orf232A0A0U1RR37 186 aa15.33■□□□□ 0.04
NEDD1-207ENST00000555114 LOC101059948A0A1B0GTJ6 334 aa15.33■□□□□ 0.04
NEDD1-207ENST00000555114 RGSL1A5PLK6 1076 aa15.33■□□□□ 0.04
NEDD1-207ENST00000555114 SMTNL1A8MU46 457 aa15.33■□□□□ 0.04
NEDD1-207ENST00000555114 MATN3O15232 486 aa15.33■□□□□ 0.04
NEDD1-207ENST00000555114 CLDN7O95471 211 aa15.33■□□□□ 0.04
NEDD1-207ENST00000555114 ATP1A1P05023 1023 aaKnown RBP15.33■□□□□ 0.04
NEDD1-207ENST00000555114 F3P13726 295 aa15.33■□□□□ 0.04
NEDD1-207ENST00000555114 TCF4P15884 667 aa15.33■□□□□ 0.04
NEDD1-207ENST00000555114 FOXK1P85037 733 aa15.33■□□□□ 0.04
NEDD1-207ENST00000555114 DSC2Q02487 901 aa15.33■□□□□ 0.04
NEDD1-207ENST00000555114 GALNT2Q10471 571 aa15.33■□□□□ 0.04
NEDD1-207ENST00000555114 IFI16Q16666 785 aaKnown RBP15.33■□□□□ 0.04
NEDD1-207ENST00000555114 DEFB109BQ30KR1 87 aa15.33■□□□□ 0.04
NEDD1-207ENST00000555114 LACTB2Q53H82 288 aaPredicted RBP15.33■□□□□ 0.04
NEDD1-207ENST00000555114 ANKRD20A8PQ5CZ79 823 aa15.33■□□□□ 0.04
NEDD1-207ENST00000555114 ALG1LQ6GMV1 187 aa15.33■□□□□ 0.04
NEDD1-207ENST00000555114 C16orf46Q6P387 395 aa15.33■□□□□ 0.04
NEDD1-207ENST00000555114 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP15.33■□□□□ 0.04
NEDD1-207ENST00000555114 LPCAT1Q8NF37 534 aa15.33■□□□□ 0.04
NEDD1-207ENST00000555114 MAML1Q92585 1016 aa15.33■□□□□ 0.04
NEDD1-207ENST00000555114 LYSMD1Q96S90 227 aa15.33■□□□□ 0.04
NEDD1-207ENST00000555114 SPRY4Q9C004 299 aa15.33■□□□□ 0.04
NEDD1-207ENST00000555114 CARD9Q9H257 536 aa15.33■□□□□ 0.04
NEDD1-207ENST00000555114 HSD3B7Q9H2F3 369 aa15.33■□□□□ 0.04
NEDD1-207ENST00000555114 FAM83DQ9H4H8 585 aa15.33■□□□□ 0.04
NEDD1-207ENST00000555114 PCDH9Q9HC56 1237 aa15.33■□□□□ 0.04
NEDD1-207ENST00000555114 RBM22Q9NW64 420 aaKnown RBP eCLIP15.33■□□□□ 0.04
NEDD1-207ENST00000555114 ANAPC7Q9UJX3 599 aa15.33■□□□□ 0.04
NEDD1-207ENST00000555114 PRKAB1Q9Y478 270 aa15.33■□□□□ 0.04
NEDD1-207ENST00000555114 KCTD3Q9Y597 815 aa15.33■□□□□ 0.04
NEDD1-207ENST00000555114 BSNQ9UPA5 3926 aa15.32■□□□□ 0.04
NEDD1-207ENST00000555114 LILRA5A6NI73 299 aa15.32■□□□□ 0.04
NEDD1-207ENST00000555114 GRID2O43424 1007 aa15.32■□□□□ 0.04
NEDD1-207ENST00000555114 MTA2O94776 668 aa15.32■□□□□ 0.04
NEDD1-207ENST00000555114 EML2O95834 649 aa15.32■□□□□ 0.04
NEDD1-207ENST00000555114 ANKRD34CP0C6C1 535 aa15.32■□□□□ 0.04
NEDD1-207ENST00000555114 MX2P20592 715 aa15.32■□□□□ 0.04
NEDD1-207ENST00000555114 CCNCP24863 283 aa15.32■□□□□ 0.04
NEDD1-207ENST00000555114 STAT5AP42229 794 aa15.32■□□□□ 0.04
NEDD1-207ENST00000555114 SPINT3P49223 89 aa15.32■□□□□ 0.04
NEDD1-207ENST00000555114 SLC25A11Q02978 314 aaKnown RBP15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms