RNA–Protein interactions for RNA: ENST00000555002.5

SYNE2-216, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 1 (best) BASIC

Gene SYNE2, Length 11,532 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-216ENST00000555002 ANXA8L1Q5VT79 327 aa6.86□□□□□ -1.31
SYNE2-216ENST00000555002 SEC14L3Q9UDX4 400 aa6.86□□□□□ -1.31
SYNE2-216ENST00000555002 HACD1B0YJ81 288 aa6.86□□□□□ -1.31
SYNE2-216ENST00000555002 SNAP91O60641 907 aa6.86□□□□□ -1.31
SYNE2-216ENST00000555002 ALDH5A1P51649 535 aaPredicted RBP6.86□□□□□ -1.31
SYNE2-216ENST00000555002 RNF43Q68DV7 783 aa6.86□□□□□ -1.31
SYNE2-216ENST00000555002 CFAP52Q8N1V2 620 aa6.86□□□□□ -1.31
SYNE2-216ENST00000555002 NKAPQ8N5F7 415 aaKnown RBP6.86□□□□□ -1.31
SYNE2-216ENST00000555002 ETNPPLQ8TBG4 499 aa6.86□□□□□ -1.31
SYNE2-216ENST00000555002 SLC25A36Q96CQ1 311 aa6.86□□□□□ -1.31
SYNE2-216ENST00000555002 IL12RB2Q99665 862 aa6.86□□□□□ -1.31
SYNE2-216ENST00000555002 COLEC10Q9Y6Z7 277 aa6.86□□□□□ -1.31
SYNE2-216ENST00000555002 EPHB6O15197 1021 aa6.86□□□□□ -1.31
SYNE2-216ENST00000555002 GRIA4P48058 902 aa6.86□□□□□ -1.31
SYNE2-216ENST00000555002 UBXN2BQ14CS0 331 aa6.86□□□□□ -1.31
SYNE2-216ENST00000555002 BEND4Q6ZU67 534 aa6.86□□□□□ -1.31
SYNE2-216ENST00000555002 XAGE5Q8WWM1 108 aa6.86□□□□□ -1.31
SYNE2-216ENST00000555002 ERVK-18Q9QC07 812 aa6.86□□□□□ -1.31
SYNE2-216ENST00000555002 PACSIN3Q9UKS6 424 aa6.86□□□□□ -1.31
SYNE2-216ENST00000555002 AGO1Q9UL18 857 aaKnown RBP6.86□□□□□ -1.31
SYNE2-216ENST00000555002 FZD1Q9UP38 647 aa6.86□□□□□ -1.31
SYNE2-216ENST00000555002 ALOX5P09917 674 aa6.86□□□□□ -1.31
SYNE2-216ENST00000555002 LINGO3P0C6S8 592 aa6.86□□□□□ -1.31
SYNE2-216ENST00000555002 CCNB1P14635 433 aa6.86□□□□□ -1.31
SYNE2-216ENST00000555002 CLCN7P51798 805 aa6.86□□□□□ -1.31
SYNE2-216ENST00000555002 CORO7P57737 925 aa6.86□□□□□ -1.31
SYNE2-216ENST00000555002 SLC15A2Q16348 729 aa6.86□□□□□ -1.31
SYNE2-216ENST00000555002 FAM83AQ86UY5 434 aa6.86□□□□□ -1.31
SYNE2-216ENST00000555002 CLIP4Q8N3C7 705 aa6.86□□□□□ -1.31
SYNE2-216ENST00000555002 LZTR1Q8N653 840 aa6.86□□□□□ -1.31
SYNE2-216ENST00000555002 OR6K6Q8NGW6 343 aa6.86□□□□□ -1.31
SYNE2-216ENST00000555002 OR52J3Q8NH60 311 aa6.86□□□□□ -1.31
SYNE2-216ENST00000555002 AKAP1Q92667 903 aaKnown RBP eCLIP6.86□□□□□ -1.31
SYNE2-216ENST00000555002 C8orf48Q96LL4 319 aa6.86□□□□□ -1.31
SYNE2-216ENST00000555002 GLIS2Q9BZE0 524 aaPredicted RBP6.86□□□□□ -1.31
SYNE2-216ENST00000555002 GMIPQ9P107 970 aa6.86□□□□□ -1.31
SYNE2-216ENST00000555002 DUSP10Q9Y6W6 482 aa6.86□□□□□ -1.31
SYNE2-216ENST00000555002 LOC100509620A0A075B734 347 aa6.86□□□□□ -1.31
SYNE2-216ENST00000555002 ZNF726A6NNF4 738 aa6.86□□□□□ -1.31
SYNE2-216ENST00000555002 CST1P01037 141 aa6.86□□□□□ -1.31
SYNE2-216ENST00000555002 ZNF823P16415 610 aa6.86□□□□□ -1.31
SYNE2-216ENST00000555002 MAXP61244 160 aa6.86□□□□□ -1.31
SYNE2-216ENST00000555002 PSME3P61289 254 aa6.86□□□□□ -1.31
SYNE2-216ENST00000555002 KLHL26Q53HC5 615 aa6.86□□□□□ -1.31
SYNE2-216ENST00000555002 ZDHHC20Q5W0Z9 365 aa6.86□□□□□ -1.31
SYNE2-216ENST00000555002 SLC27A1Q6PCB7 646 aa6.86□□□□□ -1.31
SYNE2-216ENST00000555002 GPR65Q8IYL9 337 aa6.86□□□□□ -1.31
SYNE2-216ENST00000555002 ADAMTS15Q8TE58 950 aa6.86□□□□□ -1.31
SYNE2-216ENST00000555002 HMGB4Q8WW32 186 aa6.86□□□□□ -1.31
SYNE2-216ENST00000555002 HERVK_113Q902F9 699 aa6.86□□□□□ -1.31
SYNE2-216ENST00000555002 SMG7Q92540 1137 aaKnown RBP6.86□□□□□ -1.31
SYNE2-216ENST00000555002 MFSD14AQ96MC6 490 aa6.86□□□□□ -1.31
SYNE2-216ENST00000555002 KLHL5Q96PQ7 755 aa6.86□□□□□ -1.31
SYNE2-216ENST00000555002 OSBPL11Q9BXB4 747 aa6.86□□□□□ -1.31
SYNE2-216ENST00000555002 COMMD4Q9H0A8 199 aa6.86□□□□□ -1.31
SYNE2-216ENST00000555002 PRDM8Q9NQV8 689 aa6.86□□□□□ -1.31
SYNE2-216ENST00000555002 GIMAP1-GIMAP5A0A087WTJ2 511 aa6.86□□□□□ -1.31
SYNE2-216ENST00000555002 PDPK1O15530 556 aa6.86□□□□□ -1.31
SYNE2-216ENST00000555002 UQCRC1P31930 480 aa6.86□□□□□ -1.31
SYNE2-216ENST00000555002 AVPR1BP47901 424 aa6.86□□□□□ -1.31
SYNE2-216ENST00000555002 ATP13A5Q4VNC0 1218 aa6.86□□□□□ -1.31
SYNE2-216ENST00000555002 FAM183BPQ6ZVS7 135 aa6.86□□□□□ -1.31
SYNE2-216ENST00000555002 STAG3L4Q8TBR4 150 aa6.86□□□□□ -1.31
SYNE2-216ENST00000555002 LCN9Q8WX39 176 aa6.86□□□□□ -1.31
SYNE2-216ENST00000555002 TRIM43Q96BQ3 446 aaPredicted RBP6.86□□□□□ -1.31
SYNE2-216ENST00000555002 DPYSL5Q9BPU6 564 aa6.86□□□□□ -1.31
SYNE2-216ENST00000555002 TRPV5Q9NQA5 729 aa6.86□□□□□ -1.31
SYNE2-216ENST00000555002 MALT1Q9UDY8 824 aa6.86□□□□□ -1.31
SYNE2-216ENST00000555002 OR12D3Q9UGF7 316 aa6.86□□□□□ -1.31
SYNE2-216ENST00000555002 UMODL1Q5DID0 1318 aa6.86□□□□□ -1.31
SYNE2-216ENST00000555002 HSD11B1P28845 292 aa6.86□□□□□ -1.31
SYNE2-216ENST00000555002 DHPSP49366 369 aaPredicted RBP6.86□□□□□ -1.31
SYNE2-216ENST00000555002 TARBP2Q15633 366 aaKnown RBP6.86□□□□□ -1.31
SYNE2-216ENST00000555002 SLC8B1Q6J4K2 584 aa6.86□□□□□ -1.31
SYNE2-216ENST00000555002 Q8N9G6 341 aaPredicted RBP6.86□□□□□ -1.31
SYNE2-216ENST00000555002 FNIP1Q8TF40 1166 aa6.86□□□□□ -1.31
SYNE2-216ENST00000555002 KCNF1Q9H3M0 494 aa6.86□□□□□ -1.31
SYNE2-216ENST00000555002 FBXO9Q9UK97 447 aaPredicted RBP6.86□□□□□ -1.31
SYNE2-216ENST00000555002 NAALADL1Q9UQQ1 740 aa6.86□□□□□ -1.31
SYNE2-216ENST00000555002 HIF3AQ9Y2N7 669 aa6.86□□□□□ -1.31
SYNE2-216ENST00000555002 IQSEC2Q5JU85 1478 aa6.86□□□□□ -1.31
SYNE2-216ENST00000555002 CRB1P82279 1406 aa6.85□□□□□ -1.31
SYNE2-216ENST00000555002 BANF1O75531 89 aa6.85□□□□□ -1.31
SYNE2-216ENST00000555002 C22orf31O95567 290 aa6.85□□□□□ -1.31
SYNE2-216ENST00000555002 SP2Q02086 613 aa6.85□□□□□ -1.31
SYNE2-216ENST00000555002 GIT2Q14161 759 aa6.85□□□□□ -1.31
SYNE2-216ENST00000555002 LARS2Q15031 903 aaKnown RBP6.85□□□□□ -1.31
SYNE2-216ENST00000555002 FIP1L1Q6UN15 594 aaKnown RBP6.85□□□□□ -1.31
SYNE2-216ENST00000555002 ANKS1BQ7Z6G8 1248 aa6.85□□□□□ -1.31
SYNE2-216ENST00000555002 SDR16C5Q8N3Y7 309 aa6.85□□□□□ -1.31
SYNE2-216ENST00000555002 SVILO95425 2214 aa6.85□□□□□ -1.31
SYNE2-216ENST00000555002 MDFIC2A0A1B0GVS7 189 aa6.85□□□□□ -1.31
SYNE2-216ENST00000555002 A8MU76 341 aa6.85□□□□□ -1.31
SYNE2-216ENST00000555002 TSPAN4O14817 238 aa6.85□□□□□ -1.31
SYNE2-216ENST00000555002 NUAK1O60285 661 aa6.85□□□□□ -1.31
SYNE2-216ENST00000555002 MTHFD1P11586 935 aaKnown RBP6.85□□□□□ -1.31
SYNE2-216ENST00000555002 LHCGRP22888 699 aa6.85□□□□□ -1.31
SYNE2-216ENST00000555002 SSTR1P30872 391 aa6.85□□□□□ -1.31
SYNE2-216ENST00000555002 MLLT3P42568 568 aaPredicted RBP6.85□□□□□ -1.31
SYNE2-216ENST00000555002 CTSKP43235 329 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms