RNA–Protein interactions for RNA: ENST00000554600.5

SHMT2-213, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 837 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-213ENST00000554600 TTC13Q8NBP0 860 aa10.59□□□□□ -0.71
SHMT2-213ENST00000554600 CCDC110Q8TBZ0 833 aa10.59□□□□□ -0.71
SHMT2-213ENST00000554600 BLOC1S5Q8TDH9 187 aa10.59□□□□□ -0.71
SHMT2-213ENST00000554600 TADA1Q96BN2 335 aa10.59□□□□□ -0.71
SHMT2-213ENST00000554600 MRGPRX2Q96LB1 330 aa10.59□□□□□ -0.71
SHMT2-213ENST00000554600 FICDQ9BVA6 458 aa10.59□□□□□ -0.71
SHMT2-213ENST00000554600 GBA3Q9H227 469 aa10.59□□□□□ -0.71
SHMT2-213ENST00000554600 BPIFA1Q9NP55 256 aa10.59□□□□□ -0.71
SHMT2-213ENST00000554600 ARFGAP3Q9NP61 516 aa10.59□□□□□ -0.71
SHMT2-213ENST00000554600 LZTFL1Q9NQ48 299 aa10.59□□□□□ -0.71
SHMT2-213ENST00000554600 RAD18Q9NS91 495 aa10.59□□□□□ -0.71
SHMT2-213ENST00000554600 SPATS2LQ9NUQ6 558 aaKnown RBP10.59□□□□□ -0.71
SHMT2-213ENST00000554600 TRNAU1APQ9NX07 287 aaKnown RBP10.59□□□□□ -0.71
SHMT2-213ENST00000554600 TAAR2Q9P1P5 351 aa10.59□□□□□ -0.71
SHMT2-213ENST00000554600 SLC17A4Q9Y2C5 497 aa10.59□□□□□ -0.71
SHMT2-213ENST00000554600 PLEKHM1Q9Y4G2 1056 aa10.59□□□□□ -0.71
SHMT2-213ENST00000554600 PCDHB1Q9Y5F3 818 aa10.59□□□□□ -0.71
SHMT2-213ENST00000554600 SPO11Q9Y5K1 396 aa10.59□□□□□ -0.71
SHMT2-213ENST00000554600 DDX3YO15523 660 aaKnown RBP10.58□□□□□ -0.72
SHMT2-213ENST00000554600 USP12O75317 370 aa10.58□□□□□ -0.72
SHMT2-213ENST00000554600 SLC25A14O95258 325 aaPredicted RBP10.58□□□□□ -0.72
SHMT2-213ENST00000554600 AGTP01019 485 aa10.58□□□□□ -0.72
SHMT2-213ENST00000554600 FGF1P05230 155 aa10.58□□□□□ -0.72
SHMT2-213ENST00000554600 HLA-DPA1P20036 260 aa10.58□□□□□ -0.72
SHMT2-213ENST00000554600 PSMB4P28070 264 aa10.58□□□□□ -0.72
SHMT2-213ENST00000554600 MAZP56270 477 aaKnown RBP10.58□□□□□ -0.72
SHMT2-213ENST00000554600 PEX6Q13608 980 aa10.58□□□□□ -0.72
SHMT2-213ENST00000554600 C14orf28Q4W4Y0 310 aa10.58□□□□□ -0.72
SHMT2-213ENST00000554600 ZNF648Q5T619 568 aaPredicted RBP10.58□□□□□ -0.72
SHMT2-213ENST00000554600 ARHGEF18Q6ZSZ5 1173 aa10.58□□□□□ -0.72
SHMT2-213ENST00000554600 CHST15Q7LFX5 561 aaPredicted RBP10.58□□□□□ -0.72
SHMT2-213ENST00000554600 GLT6D1Q7Z4J2 308 aa10.58□□□□□ -0.72
SHMT2-213ENST00000554600 TMC3Q7Z5M5 1100 aa10.58□□□□□ -0.72
SHMT2-213ENST00000554600 PROSER1Q86XN7 944 aa10.58□□□□□ -0.72
SHMT2-213ENST00000554600 LRRC8AQ8IWT6 810 aa10.58□□□□□ -0.72
SHMT2-213ENST00000554600 DCBLD1Q8N8Z6 715 aa10.58□□□□□ -0.72
SHMT2-213ENST00000554600 GPR26Q8NDV2 337 aa10.58□□□□□ -0.72
SHMT2-213ENST00000554600 GPR156Q8NFN8 814 aa10.58□□□□□ -0.72
SHMT2-213ENST00000554600 OR6C4Q8NGE1 309 aa10.58□□□□□ -0.72
SHMT2-213ENST00000554600 GDAP1Q8TB36 358 aa10.58□□□□□ -0.72
SHMT2-213ENST00000554600 GPBAR1Q8TDU6 330 aa10.58□□□□□ -0.72
SHMT2-213ENST00000554600 ZDHHC1Q8WTX9 485 aa10.58□□□□□ -0.72
SHMT2-213ENST00000554600 EID2BQ96D98 161 aa10.58□□□□□ -0.72
SHMT2-213ENST00000554600 HES6Q96HZ4 224 aa10.58□□□□□ -0.72
SHMT2-213ENST00000554600 COX14Q96I36 57 aa10.58□□□□□ -0.72
SHMT2-213ENST00000554600 SPATA13Q96N96 652 aa10.58□□□□□ -0.72
SHMT2-213ENST00000554600 ALS2CR12Q96Q35 445 aa10.58□□□□□ -0.72
SHMT2-213ENST00000554600 GFM1Q96RP9 751 aaKnown RBP10.58□□□□□ -0.72
SHMT2-213ENST00000554600 WDR24Q96S15 920 aa10.58□□□□□ -0.72
SHMT2-213ENST00000554600 APOL2Q9BQE5 337 aa10.58□□□□□ -0.72
SHMT2-213ENST00000554600 ZSCAN5AQ9BUG6 496 aa10.58□□□□□ -0.72
SHMT2-213ENST00000554600 HACD3Q9P035 362 aa10.58□□□□□ -0.72
SHMT2-213ENST00000554600 PRKAB1Q9Y478 270 aa10.58□□□□□ -0.72
SHMT2-213ENST00000554600 OAS3Q9Y6K5 1087 aaKnown RBP10.58□□□□□ -0.72
SHMT2-213ENST00000554600 DSPP15924 2871 aaKnown RBP10.58□□□□□ -0.72
SHMT2-213ENST00000554600 AHCTF1Q8WYP5 2266 aa10.58□□□□□ -0.72
SHMT2-213ENST00000554600 PTPRQQ9UMZ3 2332 aa10.57□□□□□ -0.72
SHMT2-213ENST00000554600 LOC285095A0A1B0GVY8 99 aa10.57□□□□□ -0.72
SHMT2-213ENST00000554600 SRRM3A6NNA2 597 aaPredicted RBP10.57□□□□□ -0.72
SHMT2-213ENST00000554600 RHPN2P1A8MT19 583 aa10.57□□□□□ -0.72
SHMT2-213ENST00000554600 AURKAO14965 403 aa10.57□□□□□ -0.72
SHMT2-213ENST00000554600 CASC3O15234 703 aaKnown RBP10.57□□□□□ -0.72
SHMT2-213ENST00000554600 BUD23O43709 281 aaKnown RBP10.57□□□□□ -0.72
SHMT2-213ENST00000554600 NOBOXO60393 691 aa10.57□□□□□ -0.72
SHMT2-213ENST00000554600 ZNF189O75820 626 aaPredicted RBP10.57□□□□□ -0.72
SHMT2-213ENST00000554600 EPOP01588 193 aa10.57□□□□□ -0.72
SHMT2-213ENST00000554600 RPLP0P05388 317 aaKnown RBP10.57□□□□□ -0.72
SHMT2-213ENST00000554600 HOXB3P14651 431 aaPredicted RBP10.57□□□□□ -0.72
SHMT2-213ENST00000554600 BPIP17213 487 aa10.57□□□□□ -0.72
SHMT2-213ENST00000554600 RPS6KA1Q15418 735 aa10.57□□□□□ -0.72
SHMT2-213ENST00000554600 SLC1A5Q15758 541 aa10.57□□□□□ -0.72
SHMT2-213ENST00000554600 PYCR3Q53H96 274 aa10.57□□□□□ -0.72
SHMT2-213ENST00000554600 CERCAMQ5T4B2 595 aa10.57□□□□□ -0.72
SHMT2-213ENST00000554600 CDCP2Q5VXM1 449 aa10.57□□□□□ -0.72
SHMT2-213ENST00000554600 FOXR1Q6PIV2 292 aa10.57□□□□□ -0.72
SHMT2-213ENST00000554600 NRROSQ86YC3 692 aa10.57□□□□□ -0.72
SHMT2-213ENST00000554600 PHYKPLQ8IUZ5 450 aa10.57□□□□□ -0.72
SHMT2-213ENST00000554600 CCNJLQ8IV13 435 aa10.57□□□□□ -0.72
SHMT2-213ENST00000554600 CACTIN-AS1Q8N1I8 211 aa10.57□□□□□ -0.72
SHMT2-213ENST00000554600 TAB3Q8N5C8 712 aaPredicted RBP10.57□□□□□ -0.72
SHMT2-213ENST00000554600 TRAM1L1Q8N609 369 aa10.57□□□□□ -0.72
SHMT2-213ENST00000554600 FAM71DQ8N9W8 422 aa10.57□□□□□ -0.72
SHMT2-213ENST00000554600 WDR48Q8TAF3 677 aa10.57□□□□□ -0.72
SHMT2-213ENST00000554600 PATE1Q8WXA2 126 aa10.57□□□□□ -0.72
SHMT2-213ENST00000554600 LRRC45Q96CN5 670 aa10.57□□□□□ -0.72
SHMT2-213ENST00000554600 DCBLD2Q96PD2 775 aa10.57□□□□□ -0.72
SHMT2-213ENST00000554600 NRSN2Q9GZP1 204 aa10.57□□□□□ -0.72
SHMT2-213ENST00000554600 ZMYND15Q9H091 742 aa10.57□□□□□ -0.72
SHMT2-213ENST00000554600 OR2AG1Q9H205 316 aa10.57□□□□□ -0.72
SHMT2-213ENST00000554600 TRABDQ9H4I3 376 aa10.57□□□□□ -0.72
SHMT2-213ENST00000554600 VPS18Q9P253 973 aa10.57□□□□□ -0.72
SHMT2-213ENST00000554600 LRIT1Q9P2V4 623 aa10.57□□□□□ -0.72
SHMT2-213ENST00000554600 RABGEF1Q9UJ41 708 aa10.57□□□□□ -0.72
SHMT2-213ENST00000554600 CNOT6Q9ULM6 557 aaKnown RBP10.57□□□□□ -0.72
SHMT2-213ENST00000554600 RAXQ9Y2V3 346 aa10.57□□□□□ -0.72
SHMT2-213ENST00000554600 AAR2Q9Y312 384 aaKnown RBP10.57□□□□□ -0.72
SHMT2-213ENST00000554600 PKP3Q9Y446 797 aa10.57□□□□□ -0.72
SHMT2-213ENST00000554600 RNF215Q9Y6U7 377 aa10.57□□□□□ -0.72
SHMT2-213ENST00000554600 TRBV23OR9-2A0A075B6M9 112 aa10.56□□□□□ -0.72
SHMT2-213ENST00000554600 TCRBV7S2A1N4TA0A589 114 aa10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms