RNA–Protein interactions for RNA: ENST00000554508.5

ACTN1-213, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 585 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-213ENST00000554508 WASHC5Q12768 1159 aa8.66□□□□□ -1.02
ACTN1-213ENST00000554508 NR1D2Q14995 579 aa8.66□□□□□ -1.02
ACTN1-213ENST00000554508 PCSK7Q16549 785 aa8.66□□□□□ -1.02
ACTN1-213ENST00000554508 C3orf38Q5JPI3 329 aa8.66□□□□□ -1.02
ACTN1-213ENST00000554508 PDPK2PQ6A1A2 396 aa8.66□□□□□ -1.02
ACTN1-213ENST00000554508 SLC30A9Q6PML9 568 aa8.66□□□□□ -1.02
ACTN1-213ENST00000554508 BBS12Q6ZW61 710 aa8.66□□□□□ -1.02
ACTN1-213ENST00000554508 PID1Q7Z2X4 250 aa8.66□□□□□ -1.02
ACTN1-213ENST00000554508 LYSMD3Q7Z3D4 306 aa8.66□□□□□ -1.02
ACTN1-213ENST00000554508 KDELC2Q7Z4H8 507 aa8.66□□□□□ -1.02
ACTN1-213ENST00000554508 TMC3Q7Z5M5 1100 aa8.66□□□□□ -1.02
ACTN1-213ENST00000554508 SPRED1Q7Z699 444 aa8.66□□□□□ -1.02
ACTN1-213ENST00000554508 PDZD3Q86UT5 571 aa8.66□□□□□ -1.02
ACTN1-213ENST00000554508 CCNJLQ8IV13 435 aa8.66□□□□□ -1.02
ACTN1-213ENST00000554508 ARL14Q8N4G2 192 aa8.66□□□□□ -1.02
ACTN1-213ENST00000554508 Q8N9G6 341 aaPredicted RBP8.66□□□□□ -1.02
ACTN1-213ENST00000554508 SPATA22Q8NHS9 363 aa8.66□□□□□ -1.02
ACTN1-213ENST00000554508 HTR3CQ8WXA8 447 aa8.66□□□□□ -1.02
ACTN1-213ENST00000554508 TMEM159Q96B96 161 aa8.66□□□□□ -1.02
ACTN1-213ENST00000554508 CCDC97Q96F63 343 aaPredicted RBP8.66□□□□□ -1.02
ACTN1-213ENST00000554508 PRR11Q96HE9 360 aaPredicted RBP8.66□□□□□ -1.02
ACTN1-213ENST00000554508 FERMT1Q9BQL6 677 aa8.66□□□□□ -1.02
ACTN1-213ENST00000554508 ZSCAN5AQ9BUG6 496 aa8.66□□□□□ -1.02
ACTN1-213ENST00000554508 GPR63Q9BZJ6 419 aa8.66□□□□□ -1.02
ACTN1-213ENST00000554508 TSGA10Q9BZW7 698 aa8.66□□□□□ -1.02
ACTN1-213ENST00000554508 KCNF1Q9H3M0 494 aa8.66□□□□□ -1.02
ACTN1-213ENST00000554508 SUDS3Q9H7L9 328 aaPredicted RBP8.66□□□□□ -1.02
ACTN1-213ENST00000554508 ASCL3Q9NQ33 180 aa8.66□□□□□ -1.02
ACTN1-213ENST00000554508 THSD1Q9NS62 852 aa8.66□□□□□ -1.02
ACTN1-213ENST00000554508 NFKBIL1Q9UBC1 381 aaPredicted RBP8.66□□□□□ -1.02
ACTN1-213ENST00000554508 FAM153AQ9UHL3 310 aa8.66□□□□□ -1.02
ACTN1-213ENST00000554508 ZNHIT2Q9UHR6 403 aa8.66□□□□□ -1.02
ACTN1-213ENST00000554508 TRHDEQ9UKU6 1024 aa8.66□□□□□ -1.02
ACTN1-213ENST00000554508 RNF215Q9Y6U7 377 aa8.66□□□□□ -1.02
ACTN1-213ENST00000554508 CACNA1GO43497 2377 aa8.66□□□□□ -1.02
ACTN1-213ENST00000554508 ZFYVE26Q68DK2 2539 aa8.65□□□□□ -1.02
ACTN1-213ENST00000554508 LOC285095A0A1B0GVY8 99 aa8.65□□□□□ -1.02
ACTN1-213ENST00000554508 RHPN2P1A8MT19 583 aa8.65□□□□□ -1.02
ACTN1-213ENST00000554508 FADS2P1A8MWK0 482 aa8.65□□□□□ -1.02
ACTN1-213ENST00000554508 GPR89AB7ZAQ6 455 aa8.65□□□□□ -1.02
ACTN1-213ENST00000554508 B4GAT1O43505 415 aa8.65□□□□□ -1.02
ACTN1-213ENST00000554508 KRT86O43790 486 aa8.65□□□□□ -1.02
ACTN1-213ENST00000554508 DNAJC6O75061 913 aa8.65□□□□□ -1.02
ACTN1-213ENST00000554508 PMPCBO75439 489 aa8.65□□□□□ -1.02
ACTN1-213ENST00000554508 ZNF189O75820 626 aaPredicted RBP8.65□□□□□ -1.02
ACTN1-213ENST00000554508 ECEL1O95672 775 aa8.65□□□□□ -1.02
ACTN1-213ENST00000554508 GPR89BP0CG08 455 aa8.65□□□□□ -1.02
ACTN1-213ENST00000554508 NFKB1P19838 968 aa8.65□□□□□ -1.02
ACTN1-213ENST00000554508 CTNNA2P26232 953 aa8.65□□□□□ -1.02
ACTN1-213ENST00000554508 ITPKBP27987 946 aa8.65□□□□□ -1.02
ACTN1-213ENST00000554508 CD68P34810 354 aaPredicted RBP8.65□□□□□ -1.02
ACTN1-213ENST00000554508 PTPN7P35236 360 aa8.65□□□□□ -1.02
ACTN1-213ENST00000554508 ACTR1BP42025 376 aa8.65□□□□□ -1.02
ACTN1-213ENST00000554508 MARCKSL1P49006 195 aa8.65□□□□□ -1.02
ACTN1-213ENST00000554508 PDX1P52945 283 aa8.65□□□□□ -1.02
ACTN1-213ENST00000554508 RWDD2BP57060 319 aa8.65□□□□□ -1.02
ACTN1-213ENST00000554508 ACTR1AP61163 376 aa8.65□□□□□ -1.02
ACTN1-213ENST00000554508 B4GALNT1Q00973 533 aa8.65□□□□□ -1.02
ACTN1-213ENST00000554508 ADCY2Q08462 1091 aa8.65□□□□□ -1.02
ACTN1-213ENST00000554508 MPP3Q13368 585 aa8.65□□□□□ -1.02
ACTN1-213ENST00000554508 BIRC2Q13490 618 aa8.65□□□□□ -1.02
ACTN1-213ENST00000554508 LLGL1Q15334 1064 aa8.65□□□□□ -1.02
ACTN1-213ENST00000554508 CCDC181Q5TID7 509 aa8.65□□□□□ -1.02
ACTN1-213ENST00000554508 KDELC1Q6UW63 502 aa8.65□□□□□ -1.02
ACTN1-213ENST00000554508 B4GALNT4Q76KP1 1039 aa8.65□□□□□ -1.02
ACTN1-213ENST00000554508 MARK2Q7KZI7 788 aaKnown RBP8.65□□□□□ -1.02
ACTN1-213ENST00000554508 RAB11FIP2Q7L804 512 aa8.65□□□□□ -1.02
ACTN1-213ENST00000554508 ZNF438Q7Z4V0 828 aa8.65□□□□□ -1.02
ACTN1-213ENST00000554508 TRIM74Q86UV6 250 aa8.65□□□□□ -1.02
ACTN1-213ENST00000554508 ZC3H18Q86VM9 953 aaKnown RBP8.65□□□□□ -1.02
ACTN1-213ENST00000554508 SFTPA2Q8IWL1 248 aa8.65□□□□□ -1.02
ACTN1-213ENST00000554508 NAGSQ8N159 534 aa8.65□□□□□ -1.02
ACTN1-213ENST00000554508 ZNF567Q8N184 647 aa8.65□□□□□ -1.02
ACTN1-213ENST00000554508 FBXO39Q8N4B4 442 aa8.65□□□□□ -1.02
ACTN1-213ENST00000554508 TRAM1L1Q8N609 369 aa8.65□□□□□ -1.02
ACTN1-213ENST00000554508 DTX3LQ8TDB6 740 aa8.65□□□□□ -1.02
ACTN1-213ENST00000554508 PTCD2Q8WV60 388 aaKnown RBP8.65□□□□□ -1.02
ACTN1-213ENST00000554508 KRT35Q92764 455 aa8.65□□□□□ -1.02
ACTN1-213ENST00000554508 EID2BQ96D98 161 aa8.65□□□□□ -1.02
ACTN1-213ENST00000554508 QKIQ96PU8 341 aaKnown RBP eCLIP8.65□□□□□ -1.02
ACTN1-213ENST00000554508 FCRL5Q96RD9 977 aa8.65□□□□□ -1.02
ACTN1-213ENST00000554508 DPYSL5Q9BPU6 564 aa8.65□□□□□ -1.02
ACTN1-213ENST00000554508 SPATA16Q9BXB7 569 aa8.65□□□□□ -1.02
ACTN1-213ENST00000554508 HEMGNQ9BXL5 484 aa8.65□□□□□ -1.02
ACTN1-213ENST00000554508 DPH1Q9BZG8 443 aa8.65□□□□□ -1.02
ACTN1-213ENST00000554508 CARD9Q9H257 536 aa8.65□□□□□ -1.02
ACTN1-213ENST00000554508 TRABDQ9H4I3 376 aa8.65□□□□□ -1.02
ACTN1-213ENST00000554508 TRIM39Q9HCM9 518 aa8.65□□□□□ -1.02
ACTN1-213ENST00000554508 LZTFL1Q9NQ48 299 aa8.65□□□□□ -1.02
ACTN1-213ENST00000554508 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.65□□□□□ -1.025e-7■■■■□ 24
ACTN1-213ENST00000554508 HACD3Q9P035 362 aa8.65□□□□□ -1.02
ACTN1-213ENST00000554508 KLHL8Q9P2G9 620 aaPredicted RBP8.65□□□□□ -1.02
ACTN1-213ENST00000554508 TRIM10Q9UDY6 481 aa8.65□□□□□ -1.02
ACTN1-213ENST00000554508 GUCA1BQ9UMX6 200 aa8.65□□□□□ -1.02
ACTN1-213ENST00000554508 SHOC2Q9UQ13 582 aa8.65□□□□□ -1.02
ACTN1-213ENST00000554508 PPP2R2CQ9Y2T4 447 aa8.65□□□□□ -1.02
ACTN1-213ENST00000554508 ZNF711Q9Y462 761 aa8.65□□□□□ -1.02
ACTN1-213ENST00000554508 PLEKHM1Q9Y4G2 1056 aa8.65□□□□□ -1.02
ACTN1-213ENST00000554508 ST14Q9Y5Y6 855 aa8.65□□□□□ -1.02
ACTN1-213ENST00000554508 OAS3Q9Y6K5 1087 aaKnown RBP8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms