RNA–Protein interactions for RNA: ENST00000554308.5

PPP4R3A-201, Transcript of protein phosphatase 4 regulatory subunit 3A, humanhuman

TSL 5

Gene PPP4R3A, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3A-201ENST00000554308 MT-CO1P00395 513 aa14.62□□□□□ -0.07
PPP4R3A-201ENST00000554308 ZNF26P17031 533 aaPredicted RBP14.62□□□□□ -0.07
PPP4R3A-201ENST00000554308 CDH2P19022 906 aaPredicted RBP14.62□□□□□ -0.07
PPP4R3A-201ENST00000554308 EN2P19622 333 aaPredicted RBP14.62□□□□□ -0.07
PPP4R3A-201ENST00000554308 SLC12A2P55011 1212 aa14.62□□□□□ -0.07
PPP4R3A-201ENST00000554308 SH3BGRP55822 239 aaPredicted RBP14.62□□□□□ -0.07
PPP4R3A-201ENST00000554308 TAS2R39P59534 338 aa14.62□□□□□ -0.07
PPP4R3A-201ENST00000554308 NSUN2Q08J23 767 aaKnown RBP eCLIP14.62□□□□□ -0.07
PPP4R3A-201ENST00000554308 ART3Q13508 389 aa14.62□□□□□ -0.07
PPP4R3A-201ENST00000554308 PTPRRQ15256 657 aa14.62□□□□□ -0.07
PPP4R3A-201ENST00000554308 CHST9Q7L1S5 443 aa14.62□□□□□ -0.07
PPP4R3A-201ENST00000554308 SPRED2Q7Z698 418 aa14.62□□□□□ -0.07
PPP4R3A-201ENST00000554308 PGAM4Q8N0Y7 254 aa14.62□□□□□ -0.07
PPP4R3A-201ENST00000554308 LSMEM2Q8N112 164 aa14.62□□□□□ -0.07
PPP4R3A-201ENST00000554308 ABTB1Q969K4 478 aaPredicted RBP14.62□□□□□ -0.07
PPP4R3A-201ENST00000554308 FEM1AQ9BSK4 669 aa14.62□□□□□ -0.07
PPP4R3A-201ENST00000554308 CFAP97Q9P2B7 532 aa14.62□□□□□ -0.07
PPP4R3A-201ENST00000554308 MARCH4Q9P2E8 410 aaPredicted RBP14.62□□□□□ -0.07
PPP4R3A-201ENST00000554308 ACOT9Q9Y305 439 aa14.62□□□□□ -0.07
PPP4R3A-201ENST00000554308 COPG1Q9Y678 874 aaKnown RBP14.62□□□□□ -0.07
PPP4R3A-201ENST00000554308 GREM1O60565 184 aa14.61□□□□□ -0.07
PPP4R3A-201ENST00000554308 ADH1AP07327 375 aa14.61□□□□□ -0.07
PPP4R3A-201ENST00000554308 HSPA8P11142 646 aaKnown RBP14.61□□□□□ -0.07
PPP4R3A-201ENST00000554308 RAB10P61026 200 aa14.61□□□□□ -0.07
PPP4R3A-201ENST00000554308 ZFP1Q6P2D0 407 aa14.61□□□□□ -0.07
PPP4R3A-201ENST00000554308 GK5Q6ZS86 529 aa14.61□□□□□ -0.07
PPP4R3A-201ENST00000554308 FEM1CQ96JP0 617 aa14.61□□□□□ -0.07
PPP4R3A-201ENST00000554308 TSNARE1Q96NA8 513 aa14.61□□□□□ -0.07
PPP4R3A-201ENST00000554308 DRC3Q9H069 523 aa14.61□□□□□ -0.07
PPP4R3A-201ENST00000554308 COQ10BQ9H8M1 238 aa14.61□□□□□ -0.07
PPP4R3A-201ENST00000554308 ADA2Q9NZK5 511 aa14.61□□□□□ -0.07
PPP4R3A-201ENST00000554308 DOCK6Q96HP0 2047 aa14.61□□□□□ -0.07
PPP4R3A-201ENST00000554308 MYLKQ15746 1914 aa14.61□□□□□ -0.07
PPP4R3A-201ENST00000554308 TYW5A2RUC4 315 aaKnown RBP14.61□□□□□ -0.07
PPP4R3A-201ENST00000554308 K7ERQ8 282 aa14.61□□□□□ -0.07
PPP4R3A-201ENST00000554308 PLOD2O00469 737 aa14.61□□□□□ -0.07
PPP4R3A-201ENST00000554308 TRMUO75648 421 aaKnown RBP14.61□□□□□ -0.07
PPP4R3A-201ENST00000554308 CD160O95971 181 aa14.61□□□□□ -0.07
PPP4R3A-201ENST00000554308 FGF1P05230 155 aa14.61□□□□□ -0.07
PPP4R3A-201ENST00000554308 SYN1P17600 705 aa14.61□□□□□ -0.07
PPP4R3A-201ENST00000554308 HLA-DPA1P20036 260 aa14.61□□□□□ -0.07
PPP4R3A-201ENST00000554308 SLC12A1Q13621 1099 aa14.61□□□□□ -0.07
PPP4R3A-201ENST00000554308 DUS1LQ6P1R4 473 aaKnown RBP14.61□□□□□ -0.07
PPP4R3A-201ENST00000554308 CILP2Q8IUL8 1156 aa14.61□□□□□ -0.07
PPP4R3A-201ENST00000554308 CHERPQ8IWX8 916 aaKnown RBP14.61□□□□□ -0.07
PPP4R3A-201ENST00000554308 BBS7Q8IWZ6 715 aa14.61□□□□□ -0.07
PPP4R3A-201ENST00000554308 LRTOMTQ8WZ04 291 aa14.61□□□□□ -0.07
PPP4R3A-201ENST00000554308 NXNL1Q96CM4 212 aa14.61□□□□□ -0.07
PPP4R3A-201ENST00000554308 OMDQ99983 421 aa14.61□□□□□ -0.07
PPP4R3A-201ENST00000554308 FCF1Q9Y324 198 aaKnown RBP14.61□□□□□ -0.07
PPP4R3A-201ENST00000554308 FIS1Q9Y3D6 152 aa14.61□□□□□ -0.07
PPP4R3A-201ENST00000554308 MIA3Q5JRA6 1907 aa14.61□□□□□ -0.07
PPP4R3A-201ENST00000554308 LTBP2Q14767 1821 aa14.6□□□□□ -0.07
PPP4R3A-201ENST00000554308 TLL1O43897 1013 aa14.6□□□□□ -0.07
PPP4R3A-201ENST00000554308 RFPL2O75678 378 aa14.6□□□□□ -0.07
PPP4R3A-201ENST00000554308 HADHAP40939 763 aa14.6□□□□□ -0.07
PPP4R3A-201ENST00000554308 CSKP41240 450 aa14.6□□□□□ -0.07
PPP4R3A-201ENST00000554308 HTRA4P83105 476 aaPredicted RBP14.6□□□□□ -0.07
PPP4R3A-201ENST00000554308 RALGDSQ12967 914 aa14.6□□□□□ -0.07
PPP4R3A-201ENST00000554308 LILRA6Q6PI73 481 aa14.6□□□□□ -0.07
PPP4R3A-201ENST00000554308 CENPLQ8N0S6 344 aaPredicted RBP14.6□□□□□ -0.07
PPP4R3A-201ENST00000554308 FSTL5Q8N475 847 aaPredicted RBP14.6□□□□□ -0.07
PPP4R3A-201ENST00000554308 CPSF7Q8N684 471 aaKnown RBP14.6□□□□□ -0.07
PPP4R3A-201ENST00000554308 OR6K2Q8NGY2 324 aa14.6□□□□□ -0.07
PPP4R3A-201ENST00000554308 RIN3Q8TB24 985 aa14.6□□□□□ -0.07
PPP4R3A-201ENST00000554308 FAM110BQ8TC76 370 aa14.6□□□□□ -0.07
PPP4R3A-201ENST00000554308 BRSK1Q8TDC3 778 aa14.6□□□□□ -0.07
PPP4R3A-201ENST00000554308 SNRNP27Q8WVK2 155 aaKnown RBP14.6□□□□□ -0.07
PPP4R3A-201ENST00000554308 EME1Q96AY2 570 aa14.6□□□□□ -0.07
PPP4R3A-201ENST00000554308 SGF29Q96ES7 293 aa14.6□□□□□ -0.07
PPP4R3A-201ENST00000554308 RANBP9Q96S59 729 aa14.6□□□□□ -0.07
PPP4R3A-201ENST00000554308 C1QTNF1Q9BXJ1 281 aa14.6□□□□□ -0.07
PPP4R3A-201ENST00000554308 TM6SF2Q9BZW4 377 aa14.6□□□□□ -0.07
PPP4R3A-201ENST00000554308 ZBTB26Q9HCK0 441 aa14.6□□□□□ -0.07
PPP4R3A-201ENST00000554308 EPS15L1Q9UBC2 864 aa14.6□□□□□ -0.07
PPP4R3A-201ENST00000554308 CLEC4EQ9ULY5 219 aa14.6□□□□□ -0.07
PPP4R3A-201ENST00000554308 CDYLQ9Y232 598 aa14.6□□□□□ -0.07
PPP4R3A-201ENST00000554308 SH3BP1Q9Y3L3 701 aa14.6□□□□□ -0.07
PPP4R3A-201ENST00000554308 NDST3O95803 873 aa14.6□□□□□ -0.07
PPP4R3A-201ENST00000554308 EPOP01588 193 aa14.6□□□□□ -0.07
PPP4R3A-201ENST00000554308 PRSS56P0CW18 603 aa14.6□□□□□ -0.07
PPP4R3A-201ENST00000554308 CTNNB1P35222 781 aa14.6□□□□□ -0.07
PPP4R3A-201ENST00000554308 NR1H2P55055 460 aa14.6□□□□□ -0.07
PPP4R3A-201ENST00000554308 FPGSQ05932 587 aa14.6□□□□□ -0.07
PPP4R3A-201ENST00000554308 TMED1Q13445 227 aa14.6□□□□□ -0.07
PPP4R3A-201ENST00000554308 ATXN7L2Q5T6C5 722 aaPredicted RBP14.6□□□□□ -0.07
PPP4R3A-201ENST00000554308 ZYG11AQ6WRX3 759 aa14.6□□□□□ -0.07
PPP4R3A-201ENST00000554308 MYO1HQ8N1T3 1032 aa14.6□□□□□ -0.07
PPP4R3A-201ENST00000554308 ELMOD1Q8N336 334 aa14.6□□□□□ -0.07
PPP4R3A-201ENST00000554308 CATSPER1Q8NEC5 780 aa14.6□□□□□ -0.07
PPP4R3A-201ENST00000554308 LPCAT1Q8NF37 534 aa14.6□□□□□ -0.07
PPP4R3A-201ENST00000554308 CALML6Q8TD86 181 aa14.6□□□□□ -0.07
PPP4R3A-201ENST00000554308 SLC29A1Q99808 456 aa14.6□□□□□ -0.07
PPP4R3A-201ENST00000554308 CCT7Q99832 543 aa14.6□□□□□ -0.07
PPP4R3A-201ENST00000554308 GMPR2Q9P2T1 348 aaKnown RBP14.6□□□□□ -0.07
PPP4R3A-201ENST00000554308 STOML2Q9UJZ1 356 aa14.6□□□□□ -0.07
PPP4R3A-201ENST00000554308 LSM7Q9UK45 103 aaKnown RBP14.6□□□□□ -0.07
PPP4R3A-201ENST00000554308 SPO11Q9Y5K1 396 aa14.6□□□□□ -0.07
PPP4R3A-201ENST00000554308 CEP290O15078 2479 aa14.6□□□□□ -0.07
PPP4R3A-201ENST00000554308 GOT2P00505 430 aaKnown RBP14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms