RNA–Protein interactions for RNA: ENST00000554258.1

NEK9-204, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-204ENST00000554258 MAP1AP78559 2803 aaPredicted RBP16.82■□□□□ 0.28
NEK9-204ENST00000554258 KRIT1O00522 736 aa16.82■□□□□ 0.28
NEK9-204ENST00000554258 ZG16O60844 167 aa16.82■□□□□ 0.28
NEK9-204ENST00000554258 F9P00740 461 aa16.82■□□□□ 0.28
NEK9-204ENST00000554258 PCCBP05166 539 aa16.82■□□□□ 0.28
NEK9-204ENST00000554258 FGF1P05230 155 aa16.82■□□□□ 0.28
NEK9-204ENST00000554258 SDC4P31431 198 aa16.82■□□□□ 0.28
NEK9-204ENST00000554258 CXCR3P49682 368 aa16.82■□□□□ 0.28
NEK9-204ENST00000554258 ITGA1P56199 1179 aa16.82■□□□□ 0.28
NEK9-204ENST00000554258 SETD3Q86TU7 594 aaPredicted RBP16.82■□□□□ 0.28
NEK9-204ENST00000554258 IQCKQ8N0W5 287 aa16.82■□□□□ 0.28
NEK9-204ENST00000554258 ARFGAP1Q8N6T3 406 aa16.82■□□□□ 0.28
NEK9-204ENST00000554258 NIPA2Q8N8Q9 360 aa16.82■□□□□ 0.28
NEK9-204ENST00000554258 OR7D4Q8NG98 312 aa16.82■□□□□ 0.28
NEK9-204ENST00000554258 KLHL32Q96NJ5 620 aa16.82■□□□□ 0.28
NEK9-204ENST00000554258 TBCBQ99426 244 aa16.82■□□□□ 0.28
NEK9-204ENST00000554258 DDIT4Q9NX09 232 aa16.82■□□□□ 0.28
NEK9-204ENST00000554258 MOSPD1Q9UJG1 213 aa16.82■□□□□ 0.28
NEK9-204ENST00000554258 PCDHGB7Q9Y5F8 929 aa16.82■□□□□ 0.28
NEK9-204ENST00000554258 HS3ST4Q9Y661 456 aa16.82■□□□□ 0.28
NEK9-204ENST00000554258 DUSP10Q9Y6W6 482 aa16.82■□□□□ 0.28
NEK9-204ENST00000554258 DOCK4Q8N1I0 1966 aa16.81■□□□□ 0.28
NEK9-204ENST00000554258 A0A0U1RQJ8 604 aa16.81■□□□□ 0.28
NEK9-204ENST00000554258 ZSCAN5CA6NGD5 496 aaPredicted RBP16.81■□□□□ 0.28
NEK9-204ENST00000554258 MYO1FO00160 1098 aa16.81■□□□□ 0.28
NEK9-204ENST00000554258 CACNB4O00305 520 aaPredicted RBP16.81■□□□□ 0.28
NEK9-204ENST00000554258 NADKO95544 446 aaPredicted RBP16.81■□□□□ 0.28
NEK9-204ENST00000554258 RECKO95980 971 aa16.81■□□□□ 0.28
NEK9-204ENST00000554258 CCDC175P0C221 793 aa16.81■□□□□ 0.28
NEK9-204ENST00000554258 ITIH2P19823 946 aa16.81■□□□□ 0.28
NEK9-204ENST00000554258 ARHGAP25P42331 645 aa16.81■□□□□ 0.28
NEK9-204ENST00000554258 SULT1E1P49888 294 aa16.81■□□□□ 0.28
NEK9-204ENST00000554258 SLC20A2Q08357 652 aa16.81■□□□□ 0.28
NEK9-204ENST00000554258 KIF5AQ12840 1032 aa16.81■□□□□ 0.28
NEK9-204ENST00000554258 PIGHQ14442 188 aaPredicted RBP16.81■□□□□ 0.28
NEK9-204ENST00000554258 C15orf59Q2T9L4 293 aaPredicted RBP16.81■□□□□ 0.28
NEK9-204ENST00000554258 ALFQ53S48 1182 aa16.81■□□□□ 0.28
NEK9-204ENST00000554258 KIAA1328Q86T90 577 aa16.81■□□□□ 0.28
NEK9-204ENST00000554258 CISD2Q8N5K1 135 aaKnown RBP16.81■□□□□ 0.28
NEK9-204ENST00000554258 GALNT6Q8NCL4 622 aa16.81■□□□□ 0.28
NEK9-204ENST00000554258 STAMBPL1Q96FJ0 436 aa16.81■□□□□ 0.28
NEK9-204ENST00000554258 AHCYL2Q96HN2 611 aaKnown RBP16.81■□□□□ 0.28
NEK9-204ENST00000554258 OSBPL1AQ9BXW6 950 aa16.81■□□□□ 0.28
NEK9-204ENST00000554258 PDP2Q9P2J9 529 aa16.81■□□□□ 0.28
NEK9-204ENST00000554258 IP6K2Q9UHH9 426 aa16.81■□□□□ 0.28
NEK9-204ENST00000554258 ANAPC7Q9UJX3 599 aa16.81■□□□□ 0.28
NEK9-204ENST00000554258 PPP2R2CQ9Y2T4 447 aa16.81■□□□□ 0.28
NEK9-204ENST00000554258 PPM1DO15297 605 aa16.8■□□□□ 0.28
NEK9-204ENST00000554258 CCP110O43303 1012 aa16.8■□□□□ 0.28
NEK9-204ENST00000554258 PROSCO94903 275 aa16.8■□□□□ 0.28
NEK9-204ENST00000554258 CCNB1P14635 433 aa16.8■□□□□ 0.28
NEK9-204ENST00000554258 KELP23276 732 aa16.8■□□□□ 0.28
NEK9-204ENST00000554258 HDAC4P56524 1084 aa16.8■□□□□ 0.28
NEK9-204ENST00000554258 GPLD1P80108 840 aa16.8■□□□□ 0.28
NEK9-204ENST00000554258 MTM1Q13496 603 aa16.8■□□□□ 0.28
NEK9-204ENST00000554258 C5orf22Q49AR2 442 aa16.8■□□□□ 0.28
NEK9-204ENST00000554258 MYO7BQ6PIF6 2116 aa16.8■□□□□ 0.28
NEK9-204ENST00000554258 ARHGAP22Q7Z5H3 698 aa16.8■□□□□ 0.28
NEK9-204ENST00000554258 HPS6Q86YV9 775 aa16.8■□□□□ 0.28
NEK9-204ENST00000554258 RHOT1Q8IXI2 618 aa16.8■□□□□ 0.28
NEK9-204ENST00000554258 RBMXL3Q8N7X1 1067 aaKnown RBP16.8■□□□□ 0.28
NEK9-204ENST00000554258 PATE1Q8WXA2 126 aa16.8■□□□□ 0.28
NEK9-204ENST00000554258 THAP4Q8WY91 577 aa16.8■□□□□ 0.28
NEK9-204ENST00000554258 NCAPGQ9BPX3 1015 aa16.8■□□□□ 0.28
NEK9-204ENST00000554258 SIK2Q9H0K1 926 aa16.8■□□□□ 0.28
NEK9-204ENST00000554258 ING2Q9H160 280 aa16.8■□□□□ 0.28
NEK9-204ENST00000554258 PIGVQ9NUD9 493 aa16.8■□□□□ 0.28
NEK9-204ENST00000554258 TAAR2Q9P1P5 351 aa16.8■□□□□ 0.28
NEK9-204ENST00000554258 ARGFXA6NJG6 315 aa16.79■□□□□ 0.28
NEK9-204ENST00000554258 TNFRSF10CO14798 259 aa16.79■□□□□ 0.28
NEK9-204ENST00000554258 SNRPB2P08579 225 aaKnown RBP16.79■□□□□ 0.28
NEK9-204ENST00000554258 ZNF28P17035 718 aa16.79■□□□□ 0.28
NEK9-204ENST00000554258 PSMA2P25787 234 aa16.79■□□□□ 0.28
NEK9-204ENST00000554258 PCK1P35558 622 aa16.79■□□□□ 0.28
NEK9-204ENST00000554258 KIAA1024LP59773 190 aa16.79■□□□□ 0.28
NEK9-204ENST00000554258 ATP11AP98196 1134 aa16.79■□□□□ 0.28
NEK9-204ENST00000554258 DEUP1Q05D60 604 aa16.79■□□□□ 0.28
NEK9-204ENST00000554258 MTA1Q13330 715 aa16.79■□□□□ 0.28
NEK9-204ENST00000554258 DNASE1L3Q13609 305 aa16.79■□□□□ 0.28
NEK9-204ENST00000554258 RAB6CQ53S08 254 aa16.79■□□□□ 0.28
NEK9-204ENST00000554258 BRMS1LQ5PSV4 323 aa16.79■□□□□ 0.28
NEK9-204ENST00000554258 TFAP2DQ7Z6R9 452 aa16.79■□□□□ 0.28
NEK9-204ENST00000554258 REXO1L1PQ8IX06 675 aa16.79■□□□□ 0.28
NEK9-204ENST00000554258 PLPP6Q8IY26 295 aa16.79■□□□□ 0.28
NEK9-204ENST00000554258 RNF10Q8N5U6 811 aaKnown RBP16.79■□□□□ 0.28
NEK9-204ENST00000554258 FAM172AQ8WUF8 416 aa16.79■□□□□ 0.28
NEK9-204ENST00000554258 FUBP1Q96AE4 644 aaKnown RBP16.79■□□□□ 0.28
NEK9-204ENST00000554258 BTBD6Q96KE9 485 aa16.79■□□□□ 0.28
NEK9-204ENST00000554258 GSDMCQ9BYG8 508 aa16.79■□□□□ 0.28
NEK9-204ENST00000554258 TSGA10Q9BZW7 698 aa16.79■□□□□ 0.28
NEK9-204ENST00000554258 RAB6CQ9H0N0 254 aa16.79■□□□□ 0.28
NEK9-204ENST00000554258 SUDS3Q9H7L9 328 aaPredicted RBP16.79■□□□□ 0.28
NEK9-204ENST00000554258 ATP13A1Q9HD20 1204 aa16.79■□□□□ 0.28
NEK9-204ENST00000554258 KCND1Q9NSA2 647 aa16.79■□□□□ 0.28
NEK9-204ENST00000554258 ARHGEF38Q9NXL2 777 aa16.79■□□□□ 0.28
NEK9-204ENST00000554258 COPG2Q9UBF2 871 aa16.79■□□□□ 0.28
NEK9-204ENST00000554258 G3BP2Q9UN86 482 aaKnown RBP16.79■□□□□ 0.28
NEK9-204ENST00000554258 PCDHGA6Q9Y5G7 932 aa16.79■□□□□ 0.28
NEK9-204ENST00000554258 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.79■□□□□ 0.28
NEK9-204ENST00000554258 FER1L5A0AVI2 2057 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms