RNA–Protein interactions for RNA: ENST00000553683.1

VRK1-202, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 247 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-202ENST00000553683 TMEM35AQ53FP2 167 aa3.21□□□□□ -1.9
VRK1-202ENST00000553683 STPG1Q5TH74 334 aa3.21□□□□□ -1.9
VRK1-202ENST00000553683 C18orf63Q68DL7 685 aa3.21□□□□□ -1.9
VRK1-202ENST00000553683 PAPD4Q6PIY7 484 aaKnown RBP3.21□□□□□ -1.9
VRK1-202ENST00000553683 C19orf48Q6RUI8 117 aa3.21□□□□□ -1.9
VRK1-202ENST00000553683 MEX3BQ6ZN04 569 aaKnown RBP3.21□□□□□ -1.9
VRK1-202ENST00000553683 PLEKHM3Q6ZWE6 761 aa3.21□□□□□ -1.9
VRK1-202ENST00000553683 TRMT1LQ7Z2T5 733 aaKnown RBP3.21□□□□□ -1.9
VRK1-202ENST00000553683 DSG4Q86SJ6 1040 aa3.21□□□□□ -1.9
VRK1-202ENST00000553683 ZNF329Q86UD4 541 aa3.21□□□□□ -1.9
VRK1-202ENST00000553683 GPR180Q86V85 440 aa3.21□□□□□ -1.9
VRK1-202ENST00000553683 ARHGAP12Q8IWW6 846 aa3.21□□□□□ -1.9
VRK1-202ENST00000553683 CTAGE4Q8IX94 777 aa3.21□□□□□ -1.9
VRK1-202ENST00000553683 TMEM116Q8NCL8 245 aa3.21□□□□□ -1.9
VRK1-202ENST00000553683 PPHLN1Q8NEY8 458 aaKnown RBP3.21□□□□□ -1.9
VRK1-202ENST00000553683 ORAI1Q96D31 301 aa3.21□□□□□ -1.9
VRK1-202ENST00000553683 DUX3Q96PT4 197 aa3.21□□□□□ -1.9
VRK1-202ENST00000553683 PIP5K1AQ99755 562 aa3.21□□□□□ -1.9
VRK1-202ENST00000553683 CMKLR1Q99788 373 aa3.21□□□□□ -1.9
VRK1-202ENST00000553683 TRMT61BQ9BVS5 477 aaKnown RBP3.21□□□□□ -1.9
VRK1-202ENST00000553683 TMEM39BQ9GZU3 492 aa3.21□□□□□ -1.9
VRK1-202ENST00000553683 USP44Q9H0E7 712 aa3.21□□□□□ -1.9
VRK1-202ENST00000553683 PDZD7Q9H5P4 517 aa3.21□□□□□ -1.9
VRK1-202ENST00000553683 SCPEP1Q9HB40 452 aa3.21□□□□□ -1.9
VRK1-202ENST00000553683 ZNF334Q9HCZ1 680 aaPredicted RBP3.21□□□□□ -1.9
VRK1-202ENST00000553683 ZFP57Q9NU63 452 aa3.21□□□□□ -1.9
VRK1-202ENST00000553683 FAM118AQ9NWS6 357 aa3.21□□□□□ -1.9
VRK1-202ENST00000553683 CWC15Q9P013 229 aaKnown RBP3.21□□□□□ -1.9
VRK1-202ENST00000553683 POLG2Q9UHN1 485 aa3.21□□□□□ -1.9
VRK1-202ENST00000553683 FBXL2Q9UKC9 423 aa3.21□□□□□ -1.9
VRK1-202ENST00000553683 KCNS2Q9ULS6 477 aa3.21□□□□□ -1.9
VRK1-202ENST00000553683 ZNF711Q9Y462 761 aa3.21□□□□□ -1.9
VRK1-202ENST00000553683 TMEM184BQ9Y519 407 aaPredicted RBP3.21□□□□□ -1.9
VRK1-202ENST00000553683 PSAT1Q9Y617 370 aa3.21□□□□□ -1.9
VRK1-202ENST00000553683 WDR81Q562E7 1941 aa3.21□□□□□ -1.9
VRK1-202ENST00000553683 ZCWPW2A0A1B0GU75 182 aa3.2□□□□□ -1.9
VRK1-202ENST00000553683 A0A1W2PQF6 199 aa3.2□□□□□ -1.9
VRK1-202ENST00000553683 FAM90A26D6RGX4 464 aa3.2□□□□□ -1.9
VRK1-202ENST00000553683 ZNHIT1O43257 154 aa3.2□□□□□ -1.9
VRK1-202ENST00000553683 RTN3O95197 1032 aaPredicted RBP3.2□□□□□ -1.9
VRK1-202ENST00000553683 AGR2O95994 175 aa3.2□□□□□ -1.9
VRK1-202ENST00000553683 PLGP00747 810 aaPredicted RBP3.2□□□□□ -1.9
VRK1-202ENST00000553683 KRT10P13645 584 aa3.2□□□□□ -1.9
VRK1-202ENST00000553683 MYOD1P15172 320 aa3.2□□□□□ -1.9
VRK1-202ENST00000553683 ICAM3P32942 547 aa3.2□□□□□ -1.9
VRK1-202ENST00000553683 KRT9P35527 623 aa3.2□□□□□ -1.9
VRK1-202ENST00000553683 GLIPR1P48060 266 aa3.2□□□□□ -1.9
VRK1-202ENST00000553683 FMO5P49326 533 aa3.2□□□□□ -1.9
VRK1-202ENST00000553683 LRMPQ12912 555 aa3.2□□□□□ -1.9
VRK1-202ENST00000553683 RBBP5Q15291 538 aaKnown RBP3.2□□□□□ -1.9
VRK1-202ENST00000553683 PDSS1Q5T2R2 415 aa3.2□□□□□ -1.9
VRK1-202ENST00000553683 GPATCH4Q5T3I0 446 aaKnown RBP3.2□□□□□ -1.9
VRK1-202ENST00000553683 JAKMIP3Q5VZ66 844 aa3.2□□□□□ -1.9
VRK1-202ENST00000553683 CCDC70Q6NSX1 233 aa3.2□□□□□ -1.9
VRK1-202ENST00000553683 SARM1Q6SZW1 724 aa3.2□□□□□ -1.9
VRK1-202ENST00000553683 TMTC3Q6ZXV5 915 aa3.2□□□□□ -1.9
VRK1-202ENST00000553683 TSPAN33Q86UF1 283 aa3.2□□□□□ -1.9
VRK1-202ENST00000553683 FOXP4Q8IVH2 680 aaPredicted RBP3.2□□□□□ -1.9
VRK1-202ENST00000553683 ODF3L1Q8IXM7 274 aa3.2□□□□□ -1.9
VRK1-202ENST00000553683 DMBX1Q8NFW5 382 aa3.2□□□□□ -1.9
VRK1-202ENST00000553683 OR13A1Q8NGR1 328 aa3.2□□□□□ -1.9
VRK1-202ENST00000553683 OR5R1Q8NH85 324 aa3.2□□□□□ -1.9
VRK1-202ENST00000553683 DUSP19Q8WTR2 217 aa3.2□□□□□ -1.9
VRK1-202ENST00000553683 ARHGEF2Q92974 986 aaKnown RBP3.2□□□□□ -1.9
VRK1-202ENST00000553683 GRAMD2BQ96HH9 432 aa3.2□□□□□ -1.9
VRK1-202ENST00000553683 EIF2AK1Q9BQI3 630 aaKnown RBP3.2□□□□□ -1.9
VRK1-202ENST00000553683 SLC26A6Q9BXS9 759 aa3.2□□□□□ -1.9
VRK1-202ENST00000553683 PCDHB16Q9NRJ7 776 aa3.2□□□□□ -1.9
VRK1-202ENST00000553683 EHD2Q9NZN4 543 aa3.2□□□□□ -1.9
VRK1-202ENST00000553683 OR14J1Q9UGF5 321 aa3.2□□□□□ -1.9
VRK1-202ENST00000553683 FBXW11Q9UKB1 542 aa3.2□□□□□ -1.9
VRK1-202ENST00000553683 RALYQ9UKM9 306 aaKnown RBP3.2□□□□□ -1.9
VRK1-202ENST00000553683 ARID4BQ4LE39 1312 aaPredicted RBP3.19□□□□□ -1.9
VRK1-202ENST00000553683 GREB1LQ9C091 1923 aaPredicted RBP3.19□□□□□ -1.9
VRK1-202ENST00000553683 B4E171 279 aa3.19□□□□□ -1.9
VRK1-202ENST00000553683 ANKRD66B4E2M5 251 aa3.19□□□□□ -1.9
VRK1-202ENST00000553683 IFNL4K9M1U5 179 aa3.19□□□□□ -1.9
VRK1-202ENST00000553683 CAPN9O14815 690 aa3.19□□□□□ -1.9
VRK1-202ENST00000553683 SYNGR3O43761 229 aa3.19□□□□□ -1.9
VRK1-202ENST00000553683 XPNPEP2O43895 674 aa3.19□□□□□ -1.9
VRK1-202ENST00000553683 NKX2-2O95096 273 aa3.19□□□□□ -1.9
VRK1-202ENST00000553683 EIF2S1P05198 315 aaKnown RBP3.19□□□□□ -1.9
VRK1-202ENST00000553683 SPARCP09486 303 aa3.19□□□□□ -1.9
VRK1-202ENST00000553683 ACTN1P12814 892 aa3.19□□□□□ -1.9
VRK1-202ENST00000553683 ITGA2P17301 1181 aa3.19□□□□□ -1.9
VRK1-202ENST00000553683 POLR2CP19387 275 aaPredicted RBP3.19□□□□□ -1.9
VRK1-202ENST00000553683 CHMP24386 653 aa3.19□□□□□ -1.9
VRK1-202ENST00000553683 MARK3P27448 753 aa3.19□□□□□ -1.9
VRK1-202ENST00000553683 TSPAN7P41732 249 aa3.19□□□□□ -1.9
VRK1-202ENST00000553683 MLLT10P55197 1068 aa3.19□□□□□ -1.9
VRK1-202ENST00000553683 RBM39Q14498 530 aaKnown RBP3.19□□□□□ -1.9
VRK1-202ENST00000553683 PNLIPRP3Q17RR3 467 aa3.19□□□□□ -1.9
VRK1-202ENST00000553683 CDONQ4KMG0 1287 aa3.19□□□□□ -1.9
VRK1-202ENST00000553683 ZNF280DQ6N043 979 aa3.19□□□□□ -1.9
VRK1-202ENST00000553683 NCEH1Q6PIU2 408 aa3.19□□□□□ -1.9
VRK1-202ENST00000553683 SEPT14Q6ZU15 432 aa3.19□□□□□ -1.9
VRK1-202ENST00000553683 MARK2Q7KZI7 788 aaKnown RBP3.19□□□□□ -1.9
VRK1-202ENST00000553683 ADSSL1Q8N142 457 aa3.19□□□□□ -1.9
VRK1-202ENST00000553683 SRBD1Q8N5C6 995 aaKnown RBP3.19□□□□□ -1.9
VRK1-202ENST00000553683 RDM1Q8NG50 284 aa3.19□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms