RNA–Protein interactions for RNA: ENST00000553659.1

ACTN1-209, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 434 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-209ENST00000553659 POC1B-GALNT4F8VUJ3 575 aa16.02■□□□□ 0.16
ACTN1-209ENST00000553659 FAM72CH0Y354 149 aa16.02■□□□□ 0.16
ACTN1-209ENST00000553659 PRPF4O43172 522 aaKnown RBP eCLIP16.02■□□□□ 0.161e-8■■■□□ 14.8
ACTN1-209ENST00000553659 RASA4O43374 803 aa16.02■□□□□ 0.16
ACTN1-209ENST00000553659 LEFTY1O75610 366 aa16.02■□□□□ 0.16
ACTN1-209ENST00000553659 MAP3K6O95382 1288 aa16.02■□□□□ 0.16
ACTN1-209ENST00000553659 METTL18O95568 372 aa16.02■□□□□ 0.16
ACTN1-209ENST00000553659 KRT15P19012 456 aa16.02■□□□□ 0.16
ACTN1-209ENST00000553659 OR1E1P30953 314 aa16.02■□□□□ 0.16
ACTN1-209ENST00000553659 GARSP41250 739 aaKnown RBP16.02■□□□□ 0.16
ACTN1-209ENST00000553659 RPS21P63220 83 aaKnown RBP16.02■□□□□ 0.16
ACTN1-209ENST00000553659 NAB1Q13506 487 aa16.02■□□□□ 0.16
ACTN1-209ENST00000553659 PRPSAP1Q14558 356 aa16.02■□□□□ 0.16
ACTN1-209ENST00000553659 FAM72AQ5TYM5 149 aa16.02■□□□□ 0.16
ACTN1-209ENST00000553659 MANEALQ5VSG8 457 aa16.02■□□□□ 0.16
ACTN1-209ENST00000553659 SEL1L3Q68CR1 1132 aa16.02■□□□□ 0.16
ACTN1-209ENST00000553659 FAM72DQ6L9T8 149 aa16.02■□□□□ 0.16
ACTN1-209ENST00000553659 TIGD7Q6NT04 549 aaPredicted RBP16.02■□□□□ 0.16
ACTN1-209ENST00000553659 C22orf39Q6P5X5 142 aa16.02■□□□□ 0.16
ACTN1-209ENST00000553659 ZNF449Q6P9G9 518 aa16.02■□□□□ 0.16
ACTN1-209ENST00000553659 DPY19L3Q6ZPD9 716 aa16.02■□□□□ 0.16
ACTN1-209ENST00000553659 TRABD2AQ86V40 505 aa16.02■□□□□ 0.16
ACTN1-209ENST00000553659 CAND1Q86VP6 1230 aaKnown RBP16.02■□□□□ 0.16
ACTN1-209ENST00000553659 FAM72BQ86X60 149 aa16.02■□□□□ 0.16
ACTN1-209ENST00000553659 SLC22A18ASQ8N1D0 253 aa16.02■□□□□ 0.16
ACTN1-209ENST00000553659 ZNF248Q8NDW4 579 aa16.02■□□□□ 0.16
ACTN1-209ENST00000553659 GRIN3AQ8TCU5 1115 aa16.02■□□□□ 0.16
ACTN1-209ENST00000553659 FBF1Q8TES7 1133 aa16.02■□□□□ 0.16
ACTN1-209ENST00000553659 FEM1CQ96JP0 617 aa16.02■□□□□ 0.16
ACTN1-209ENST00000553659 TSGA13Q96PP4 275 aa16.02■□□□□ 0.16
ACTN1-209ENST00000553659 SMC6Q96SB8 1091 aa16.02■□□□□ 0.16
ACTN1-209ENST00000553659 DUSP23Q9BVJ7 150 aa16.02■□□□□ 0.16
ACTN1-209ENST00000553659 SLC17A9Q9BYT1 436 aa16.02■□□□□ 0.16
ACTN1-209ENST00000553659 MAGEB5Q9BZ81 275 aa16.02■□□□□ 0.16
ACTN1-209ENST00000553659 TNKS2Q9H2K2 1166 aa16.02■□□□□ 0.16
ACTN1-209ENST00000553659 CAAP1Q9H8G2 361 aa16.02■□□□□ 0.16
ACTN1-209ENST00000553659 EVA1BQ9NVM1 165 aa16.02■□□□□ 0.16
ACTN1-209ENST00000553659 DNAJC28Q9NX36 388 aa16.02■□□□□ 0.16
ACTN1-209ENST00000553659 ZNF180Q9UJW8 692 aa16.02■□□□□ 0.16
ACTN1-209ENST00000553659 TMEM120BA0PK00 339 aa16.01■□□□□ 0.15
ACTN1-209ENST00000553659 ILVBLA1L0T0 632 aa16.01■□□□□ 0.15
ACTN1-209ENST00000553659 K7ESM1 405 aa16.01■□□□□ 0.15
ACTN1-209ENST00000553659 EBAG9O00559 213 aa16.01■□□□□ 0.15
ACTN1-209ENST00000553659 ZNF821O75541 412 aaPredicted RBP16.01■□□□□ 0.15
ACTN1-209ENST00000553659 DXOO77932 396 aaKnown RBP16.01■□□□□ 0.15
ACTN1-209ENST00000553659 MPOP05164 745 aa16.01■□□□□ 0.15
ACTN1-209ENST00000553659 CCNCP24863 283 aa16.01■□□□□ 0.15
ACTN1-209ENST00000553659 SSTR1P30872 391 aa16.01■□□□□ 0.15
ACTN1-209ENST00000553659 LSSP48449 732 aa16.01■□□□□ 0.15
ACTN1-209ENST00000553659 NEK3P51956 506 aa16.01■□□□□ 0.15
ACTN1-209ENST00000553659 PCBP4P57723 403 aaKnown RBP16.01■□□□□ 0.15
ACTN1-209ENST00000553659 HNRNPKP61978 463 aaKnown RBP eCLIP16.01■□□□□ 0.15
ACTN1-209ENST00000553659 CXADRP78310 365 aa16.01■□□□□ 0.15
ACTN1-209ENST00000553659 SLC20A2Q08357 652 aa16.01■□□□□ 0.15
ACTN1-209ENST00000553659 WASHC5Q12768 1159 aa16.01■□□□□ 0.15
ACTN1-209ENST00000553659 ZNF542PQ5EBM4 170 aa16.01■□□□□ 0.15
ACTN1-209ENST00000553659 ARMC3Q5W041 872 aa16.01■□□□□ 0.15
ACTN1-209ENST00000553659 KIAA1161Q6NSJ0 714 aa16.01■□□□□ 0.15
ACTN1-209ENST00000553659 RETSATQ6NUM9 610 aa16.01■□□□□ 0.15
ACTN1-209ENST00000553659 ZNF783Q6ZMS7 281 aa16.01■□□□□ 0.15
ACTN1-209ENST00000553659 PID1Q7Z2X4 250 aa16.01■□□□□ 0.15
ACTN1-209ENST00000553659 TFAP2DQ7Z6R9 452 aa16.01■□□□□ 0.15
ACTN1-209ENST00000553659 TAB3Q8N5C8 712 aaPredicted RBP16.01■□□□□ 0.15
ACTN1-209ENST00000553659 OR7D4Q8NG98 312 aa16.01■□□□□ 0.15
ACTN1-209ENST00000553659 GSDMBQ8TAX9 411 aa16.01■□□□□ 0.15
ACTN1-209ENST00000553659 DYDC1Q8WWB3 177 aa16.01■□□□□ 0.15
ACTN1-209ENST00000553659 CHMP6Q96FZ7 201 aa16.01■□□□□ 0.15
ACTN1-209ENST00000553659 HIC2Q96JB3 615 aa16.01■□□□□ 0.15
ACTN1-209ENST00000553659 PAFAH2Q99487 392 aa16.01■□□□□ 0.15
ACTN1-209ENST00000553659 EBNA1BP2Q99848 306 aaKnown RBP16.01■□□□□ 0.15
ACTN1-209ENST00000553659 CEP44Q9C0F1 390 aa16.01■□□□□ 0.15
ACTN1-209ENST00000553659 ABCG4Q9H172 646 aa16.01■□□□□ 0.15
ACTN1-209ENST00000553659 PPANQ9NQ55 473 aaKnown RBP16.01■□□□□ 0.15
ACTN1-209ENST00000553659 TMPRSS4Q9NRS4 437 aa16.01■□□□□ 0.15
ACTN1-209ENST00000553659 GPR27Q9NS67 375 aa16.01■□□□□ 0.15
ACTN1-209ENST00000553659 PPARGC1AQ9UBK2 798 aaKnown RBP16.01■□□□□ 0.15
ACTN1-209ENST00000553659 WASF2Q9Y6W5 498 aa16.01■□□□□ 0.15
ACTN1-209ENST00000553659 RP1P56715 2156 aa16.01■□□□□ 0.15
ACTN1-209ENST00000553659 COL27A1Q8IZC6 1860 aaPredicted RBP16.01■□□□□ 0.15
ACTN1-209ENST00000553659 LY6G6EA0A0G2JKS1 128 aa16■□□□□ 0.15
ACTN1-209ENST00000553659 SPTY2D1-AS1A0A0U1RR47 76 aa16■□□□□ 0.15
ACTN1-209ENST00000553659 POM121BA6NF01 834 aa16■□□□□ 0.15
ACTN1-209ENST00000553659 SDR42E2A6NKP2 422 aa16■□□□□ 0.15
ACTN1-209ENST00000553659 USP12O75317 370 aa16■□□□□ 0.15
ACTN1-209ENST00000553659 CSO75390 466 aaKnown RBP16■□□□□ 0.15
ACTN1-209ENST00000553659 ZMPSTE24O75844 475 aa16■□□□□ 0.15
ACTN1-209ENST00000553659 SUN1O94901 812 aa16■□□□□ 0.15
ACTN1-209ENST00000553659 ZIC2O95409 532 aaPredicted RBP16■□□□□ 0.15
ACTN1-209ENST00000553659 PAK4O96013 591 aaPredicted RBP16■□□□□ 0.15
ACTN1-209ENST00000553659 INHBAP08476 426 aa16■□□□□ 0.15
ACTN1-209ENST00000553659 MYF5P13349 255 aa16■□□□□ 0.15
ACTN1-209ENST00000553659 ADRB3P13945 408 aa16■□□□□ 0.15
ACTN1-209ENST00000553659 ITGB7P26010 798 aa16■□□□□ 0.15
ACTN1-209ENST00000553659 PTPN3P26045 913 aa16■□□□□ 0.15
ACTN1-209ENST00000553659 GCAP28676 217 aa16■□□□□ 0.15
ACTN1-209ENST00000553659 SERPINH1P50454 418 aaKnown RBP16■□□□□ 0.15
ACTN1-209ENST00000553659 ERVPABLB-1P60509 514 aa16■□□□□ 0.15
ACTN1-209ENST00000553659 GABREP78334 506 aa16■□□□□ 0.15
ACTN1-209ENST00000553659 FGL2Q14314 439 aa16■□□□□ 0.15
ACTN1-209ENST00000553659 FZD2Q14332 565 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms