RNA–Protein interactions for RNA: ENST00000553569.1

TDP1-206, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 3

Gene TDP1, Length 879 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-206ENST00000553569 ERI2A8K979 691 aaKnown RBP22.64■■□□□ 1.21
TDP1-206ENST00000553569 LMO7DNF2Z398 122 aa22.64■■□□□ 1.21
TDP1-206ENST00000553569 PHF2O75151 1096 aa22.64■■□□□ 1.21
TDP1-206ENST00000553569 CRTAMO95727 393 aa22.64■■□□□ 1.21
TDP1-206ENST00000553569 FUCA1P04066 466 aa22.64■■□□□ 1.21
TDP1-206ENST00000553569 APRTP07741 180 aa22.64■■□□□ 1.21
TDP1-206ENST00000553569 COILP38432 576 aaPredicted RBP22.64■■□□□ 1.21
TDP1-206ENST00000553569 DAB2P98082 770 aa22.64■■□□□ 1.21
TDP1-206ENST00000553569 CYP1B1Q16678 543 aa22.64■■□□□ 1.21
TDP1-206ENST00000553569 PROX2Q3B8N5 592 aa22.64■■□□□ 1.21
TDP1-206ENST00000553569 PAPD7Q5XG87 772 aaKnown RBP22.64■■□□□ 1.21
TDP1-206ENST00000553569 LINC00523Q86TU6 105 aa22.64■■□□□ 1.21
TDP1-206ENST00000553569 DNAAF3Q8N9W5 541 aa22.64■■□□□ 1.21
TDP1-206ENST00000553569 OR4K2Q8NGD2 314 aa22.64■■□□□ 1.21
TDP1-206ENST00000553569 OR52K1Q8NGK4 314 aa22.64■■□□□ 1.21
TDP1-206ENST00000553569 IL26Q9NPH9 171 aa22.64■■□□□ 1.21
TDP1-206ENST00000553569 FANCGO15287 622 aa22.63■■□□□ 1.21
TDP1-206ENST00000553569 IVLP07476 585 aa22.63■■□□□ 1.21
TDP1-206ENST00000553569 MYF5P13349 255 aa22.63■■□□□ 1.21
TDP1-206ENST00000553569 TERF1P54274 439 aa22.63■■□□□ 1.21
TDP1-206ENST00000553569 TMPRSS15P98073 1019 aa22.63■■□□□ 1.21
TDP1-206ENST00000553569 MSLNQ13421 630 aaPredicted RBP22.63■■□□□ 1.21
TDP1-206ENST00000553569 POU6F1Q14863 301 aa22.63■■□□□ 1.21
TDP1-206ENST00000553569 CHRNA6Q15825 494 aa22.63■■□□□ 1.21
TDP1-206ENST00000553569 ZNF648Q5T619 568 aaPredicted RBP22.63■■□□□ 1.21
TDP1-206ENST00000553569 ZDHHC20Q5W0Z9 365 aa22.63■■□□□ 1.21
TDP1-206ENST00000553569 PDPK2PQ6A1A2 396 aa22.63■■□□□ 1.21
TDP1-206ENST00000553569 CCDC137Q6PK04 289 aaKnown RBP22.63■■□□□ 1.21
TDP1-206ENST00000553569 C4orf22Q6V702 233 aa22.63■■□□□ 1.21
TDP1-206ENST00000553569 TAF8Q7Z7C8 310 aa22.63■■□□□ 1.21
TDP1-206ENST00000553569 GKN2Q86XP6 184 aa22.63■■□□□ 1.21
TDP1-206ENST00000553569 PNPLA1Q8N8W4 532 aa22.63■■□□□ 1.21
TDP1-206ENST00000553569 CCL4L1Q8NHW4 92 aa22.63■■□□□ 1.21
TDP1-206ENST00000553569 GLYATL1Q969I3 302 aa22.63■■□□□ 1.21
TDP1-206ENST00000553569 APOLD1Q96LR9 279 aa22.63■■□□□ 1.21
TDP1-206ENST00000553569 TOR4AQ9NXH8 423 aa22.63■■□□□ 1.21
TDP1-206ENST00000553569 APOBEC2Q9Y235 224 aaKnown RBP22.63■■□□□ 1.21
TDP1-206ENST00000553569 SAR1BQ9Y6B6 198 aa22.63■■□□□ 1.21
TDP1-206ENST00000553569 GLYATL1P3A0A0U1RQE8 302 aa22.62■■□□□ 1.21
TDP1-206ENST00000553569 YY2O15391 372 aa22.62■■□□□ 1.21
TDP1-206ENST00000553569 GPR39O43194 453 aa22.62■■□□□ 1.21
TDP1-206ENST00000553569 SLC25A14O95258 325 aaPredicted RBP22.62■■□□□ 1.21
TDP1-206ENST00000553569 ZNF140P52738 457 aaPredicted RBP22.62■■□□□ 1.21
TDP1-206ENST00000553569 FOXC1Q12948 553 aa22.62■■□□□ 1.21
TDP1-206ENST00000553569 ATP13A5Q4VNC0 1218 aa22.62■■□□□ 1.21
TDP1-206ENST00000553569 ZCCHC8Q6NZY4 707 aaKnown RBP22.62■■□□□ 1.21
TDP1-206ENST00000553569 SLCO6A1Q86UG4 719 aa22.62■■□□□ 1.21
TDP1-206ENST00000553569 PHYKPLQ8IUZ5 450 aa22.62■■□□□ 1.21
TDP1-206ENST00000553569 OR13C4Q8NGS5 318 aa22.62■■□□□ 1.21
TDP1-206ENST00000553569 SIRPGQ9P1W8 387 aa22.62■■□□□ 1.21
TDP1-206ENST00000553569 FKBPLQ9UIM3 349 aa22.62■■□□□ 1.21
TDP1-206ENST00000553569 GPSM3Q9Y4H4 160 aa22.62■■□□□ 1.21
TDP1-206ENST00000553569 TPP1O14773 563 aa22.61■■□□□ 1.21
TDP1-206ENST00000553569 PPFIA2O75334 1257 aa22.61■■□□□ 1.21
TDP1-206ENST00000553569 SUN1O94901 812 aa22.61■■□□□ 1.21
TDP1-206ENST00000553569 KRT14P02533 472 aa22.61■■□□□ 1.21
TDP1-206ENST00000553569 ADRB1P08588 477 aa22.61■■□□□ 1.21
TDP1-206ENST00000553569 CKMT2P17540 419 aa22.61■■□□□ 1.21
TDP1-206ENST00000553569 GRIA1P42261 906 aa22.61■■□□□ 1.21
TDP1-206ENST00000553569 PDE1BQ01064 536 aa22.61■■□□□ 1.21
TDP1-206ENST00000553569 CDH17Q12864 832 aa22.61■■□□□ 1.21
TDP1-206ENST00000553569 C6orf132Q5T0Z8 1188 aa22.61■■□□□ 1.21
TDP1-206ENST00000553569 GALNT13Q8IUC8 556 aa22.61■■□□□ 1.21
TDP1-206ENST00000553569 GDAP1Q8TB36 358 aa22.61■■□□□ 1.21
TDP1-206ENST00000553569 OR2M4Q96R27 311 aa22.61■■□□□ 1.21
TDP1-206ENST00000553569 OR2AG1Q9H205 316 aa22.61■■□□□ 1.21
TDP1-206ENST00000553569 VPS18Q9P253 973 aa22.61■■□□□ 1.21
TDP1-206ENST00000553569 PRKAB1Q9Y478 270 aa22.61■■□□□ 1.21
TDP1-206ENST00000553569 CCDC78A2IDD5 438 aa22.6■■□□□ 1.21
TDP1-206ENST00000553569 CCL22O00626 93 aa22.6■■□□□ 1.21
TDP1-206ENST00000553569 GAPDHSO14556 408 aaPredicted RBP22.6■■□□□ 1.21
TDP1-206ENST00000553569 LDB2O43679 373 aa22.6■■□□□ 1.21
TDP1-206ENST00000553569 UGT1A9O60656 530 aa22.6■■□□□ 1.21
TDP1-206ENST00000553569 MTX2O75431 263 aa22.6■■□□□ 1.21
TDP1-206ENST00000553569 PRAMEF1O95521 474 aa22.6■■□□□ 1.21
TDP1-206ENST00000553569 GAS8O95995 478 aa22.6■■□□□ 1.21
TDP1-206ENST00000553569 UGT1A6P19224 532 aa22.6■■□□□ 1.21
TDP1-206ENST00000553569 UGT1A1P22309 533 aa22.6■■□□□ 1.21
TDP1-206ENST00000553569 UGT1A4P22310 534 aa22.6■■□□□ 1.21
TDP1-206ENST00000553569 UGT1A3P35503 534 aa22.6■■□□□ 1.21
TDP1-206ENST00000553569 UGT1A5P35504 534 aa22.6■■□□□ 1.21
TDP1-206ENST00000553569 ADCY8P40145 1251 aa22.6■■□□□ 1.21
TDP1-206ENST00000553569 FNTAP49354 379 aa22.6■■□□□ 1.21
TDP1-206ENST00000553569 ACADVLP49748 655 aa22.6■■□□□ 1.21
TDP1-206ENST00000553569 ILF3Q12906 894 aaKnown RBP eCLIP22.6■■□□□ 1.21
TDP1-206ENST00000553569 GPS1Q13098 491 aa22.6■■□□□ 1.21
TDP1-206ENST00000553569 SCG3Q8WXD2 468 aaKnown RBP22.6■■□□□ 1.21
TDP1-206ENST00000553569 SCARF2Q96GP6 870 aaPredicted RBP22.6■■□□□ 1.21
TDP1-206ENST00000553569 DNAJC1Q96KC8 554 aaKnown RBP22.6■■□□□ 1.21
TDP1-206ENST00000553569 UGT1A7Q9HAW7 530 aa22.6■■□□□ 1.21
TDP1-206ENST00000553569 UGT1A10Q9HAW8 530 aa22.6■■□□□ 1.21
TDP1-206ENST00000553569 UGT1A8Q9HAW9 530 aa22.6■■□□□ 1.21
TDP1-206ENST00000553569 EIF2B3Q9NR50 452 aaKnown RBP22.6■■□□□ 1.21
TDP1-206ENST00000553569 ATXN10Q9UBB4 475 aa22.6■■□□□ 1.21
TDP1-206ENST00000553569 ZNHIT2Q9UHR6 403 aa22.6■■□□□ 1.21
TDP1-206ENST00000553569 TMPRSS11EQ9UL52 423 aa22.6■■□□□ 1.21
TDP1-206ENST00000553569 GPR34Q9UPC5 381 aa22.6■■□□□ 1.21
TDP1-206ENST00000553569 PLEKHM1Q9Y4G2 1056 aa22.6■■□□□ 1.21
TDP1-206ENST00000553569 PCYT1BQ9Y5K3 369 aaPredicted RBP22.6■■□□□ 1.21
TDP1-206ENST00000553569 PLXNB3Q9ULL4 1909 aa22.6■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms