RNA–Protein interactions for RNA: ENST00000553529.5

SHMT2-206, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-206ENST00000553529 ILF3Q12906 894 aaKnown RBP eCLIP18.08■□□□□ 0.48
SHMT2-206ENST00000553529 SOWAHCQ53LP3 525 aaPredicted RBP18.08■□□□□ 0.48
SHMT2-206ENST00000553529 TFDP3Q5H9I0 405 aa18.08■□□□□ 0.48
SHMT2-206ENST00000553529 CHST15Q7LFX5 561 aaPredicted RBP18.08■□□□□ 0.48
SHMT2-206ENST00000553529 C17orf82Q86X59 251 aaPredicted RBP18.08■□□□□ 0.48
SHMT2-206ENST00000553529 CCDC170Q8IYT3 715 aa18.08■□□□□ 0.48
SHMT2-206ENST00000553529 NDUFAF2Q8N183 169 aa18.08■□□□□ 0.48
SHMT2-206ENST00000553529 PMEPA1Q969W9 287 aa18.08■□□□□ 0.48
SHMT2-206ENST00000553529 QKIQ96PU8 341 aaKnown RBP eCLIP18.08■□□□□ 0.48
SHMT2-206ENST00000553529 GSDMCQ9BYG8 508 aa18.08■□□□□ 0.48
SHMT2-206ENST00000553529 FAM83DQ9H4H8 585 aa18.08■□□□□ 0.48
SHMT2-206ENST00000553529 CPNE5Q9HCH3 593 aa18.08■□□□□ 0.48
SHMT2-206ENST00000553529 PDE2AO00408 941 aaPredicted RBP18.07■□□□□ 0.48
SHMT2-206ENST00000553529 TCEA3O75764 348 aa18.07■□□□□ 0.48
SHMT2-206ENST00000553529 TNFSF15O95150 251 aa18.07■□□□□ 0.48
SHMT2-206ENST00000553529 ZRANB2O95218 330 aaKnown RBP eCLIP18.07■□□□□ 0.48
SHMT2-206ENST00000553529 ACP5P13686 325 aa18.07■□□□□ 0.48
SHMT2-206ENST00000553529 ZNF8P17098 575 aaPredicted RBP18.07■□□□□ 0.48
SHMT2-206ENST00000553529 BPIP17213 487 aa18.07■□□□□ 0.48
SHMT2-206ENST00000553529 ALDH4A1P30038 563 aa18.07■□□□□ 0.48
SHMT2-206ENST00000553529 CSF2RBP32927 897 aa18.07■□□□□ 0.48
SHMT2-206ENST00000553529 CTNNA1P35221 906 aaKnown RBP18.07■□□□□ 0.48
SHMT2-206ENST00000553529 ACTN2P35609 894 aa18.07■□□□□ 0.48
SHMT2-206ENST00000553529 WNT3AP56704 352 aa18.07■□□□□ 0.48
SHMT2-206ENST00000553529 RPL26P61254 145 aaKnown RBP18.07■□□□□ 0.48
SHMT2-206ENST00000553529 CRTC3Q6UUV7 619 aa18.07■□□□□ 0.48
SHMT2-206ENST00000553529 ZNF574Q6ZN55 896 aaPredicted RBP18.07■□□□□ 0.48
SHMT2-206ENST00000553529 TMC3Q7Z5M5 1100 aa18.07■□□□□ 0.48
SHMT2-206ENST00000553529 NRSN1Q8IZ57 195 aa18.07■□□□□ 0.48
SHMT2-206ENST00000553529 RCBTB1Q8NDN9 531 aa18.07■□□□□ 0.48
SHMT2-206ENST00000553529 EXD1Q8NHP7 514 aa18.07■□□□□ 0.48
SHMT2-206ENST00000553529 P3H4Q92791 437 aa18.07■□□□□ 0.48
SHMT2-206ENST00000553529 MRGPRX2Q96LB1 330 aa18.07■□□□□ 0.48
SHMT2-206ENST00000553529 SLC46A1Q96NT5 459 aa18.07■□□□□ 0.48
SHMT2-206ENST00000553529 ZFYVE1Q9HBF4 777 aa18.07■□□□□ 0.48
SHMT2-206ENST00000553529 TRNAU1APQ9NX07 287 aaKnown RBP18.07■□□□□ 0.48
SHMT2-206ENST00000553529 PKD2L2Q9NZM6 624 aa18.07■□□□□ 0.48
SHMT2-206ENST00000553529 KLHL8Q9P2G9 620 aaPredicted RBP18.07■□□□□ 0.48
SHMT2-206ENST00000553529 ATXN10Q9UBB4 475 aa18.07■□□□□ 0.48
SHMT2-206ENST00000553529 ZNHIT2Q9UHR6 403 aa18.07■□□□□ 0.48
SHMT2-206ENST00000553529 RPL26L1Q9UNX3 145 aaKnown RBP18.07■□□□□ 0.48
SHMT2-206ENST00000553529 PRAMEF33A0A0G2JMD5 474 aa18.06■□□□□ 0.48
SHMT2-206ENST00000553529 MACROD2A1Z1Q3 448 aa18.06■□□□□ 0.48
SHMT2-206ENST00000553529 PYGMP11217 842 aa18.06■□□□□ 0.48
SHMT2-206ENST00000553529 CA4P22748 312 aa18.06■□□□□ 0.48
SHMT2-206ENST00000553529 NFKBIAP25963 317 aa18.06■□□□□ 0.48
SHMT2-206ENST00000553529 INHBCP55103 352 aa18.06■□□□□ 0.48
SHMT2-206ENST00000553529 NAP1L1P55209 391 aaKnown RBP18.06■□□□□ 0.48
SHMT2-206ENST00000553529 OTUD4Q01804 1114 aaKnown RBP18.06■□□□□ 0.48
SHMT2-206ENST00000553529 TFDP2Q14188 446 aa18.06■□□□□ 0.48
SHMT2-206ENST00000553529 C16orf72Q14CZ0 275 aa18.06■□□□□ 0.48
SHMT2-206ENST00000553529 KCTD19Q17RG1 926 aaPredicted RBP18.06■□□□□ 0.48
SHMT2-206ENST00000553529 SIRPB2Q5JXA9 342 aa18.06■□□□□ 0.48
SHMT2-206ENST00000553529 RCOR2Q8IZ40 523 aa18.06■□□□□ 0.48
SHMT2-206ENST00000553529 LRRC57Q8N9N7 239 aa18.06■□□□□ 0.48
SHMT2-206ENST00000553529 IPMKQ8NFU5 416 aa18.06■□□□□ 0.48
SHMT2-206ENST00000553529 SLC37A2Q8TED4 501 aa18.06■□□□□ 0.48
SHMT2-206ENST00000553529 RNF31Q96EP0 1072 aa18.06■□□□□ 0.48
SHMT2-206ENST00000553529 APOL2Q9BQE5 337 aa18.06■□□□□ 0.48
SHMT2-206ENST00000553529 SPATA16Q9BXB7 569 aa18.06■□□□□ 0.48
SHMT2-206ENST00000553529 OR2AG1Q9H205 316 aa18.06■□□□□ 0.48
SHMT2-206ENST00000553529 TBC1D29Q9UFV1 150 aa18.06■□□□□ 0.48
SHMT2-206ENST00000553529 SLC23A2Q9UGH3 650 aa18.06■□□□□ 0.48
SHMT2-206ENST00000553529 APPL1Q9UKG1 709 aa18.06■□□□□ 0.48
SHMT2-206ENST00000553529 CDRT15L2A8MXV6 281 aa18.05■□□□□ 0.48
SHMT2-206ENST00000553529 DXOO77932 396 aaKnown RBP18.05■□□□□ 0.48
SHMT2-206ENST00000553529 NDST3O95803 873 aa18.05■□□□□ 0.48
SHMT2-206ENST00000553529 PRB1P04280 392 aa18.05■□□□□ 0.48
SHMT2-206ENST00000553529 UGT1A5P35504 534 aa18.05■□□□□ 0.48
SHMT2-206ENST00000553529 NR2C2P49116 596 aa18.05■□□□□ 0.48
SHMT2-206ENST00000553529 TGIF1Q15583 401 aa18.05■□□□□ 0.48
SHMT2-206ENST00000553529 BBS12Q6ZW61 710 aa18.05■□□□□ 0.48
SHMT2-206ENST00000553529 PID1Q7Z2X4 250 aa18.05■□□□□ 0.48
SHMT2-206ENST00000553529 GALNT13Q8IUC8 556 aa18.05■□□□□ 0.48
SHMT2-206ENST00000553529 TMTC1Q8IUR5 882 aa18.05■□□□□ 0.48
SHMT2-206ENST00000553529 SLITRK4Q8IW52 837 aa18.05■□□□□ 0.48
SHMT2-206ENST00000553529 TTC30BQ8N4P2 665 aa18.05■□□□□ 0.48
SHMT2-206ENST00000553529 ACTL9Q8TC94 416 aa18.05■□□□□ 0.48
SHMT2-206ENST00000553529 HTR3CQ8WXA8 447 aa18.05■□□□□ 0.48
SHMT2-206ENST00000553529 CCDC97Q96F63 343 aaPredicted RBP18.05■□□□□ 0.48
SHMT2-206ENST00000553529 ADGRE3Q9BY15 652 aa18.05■□□□□ 0.48
SHMT2-206ENST00000553529 GPR63Q9BZJ6 419 aa18.05■□□□□ 0.48
SHMT2-206ENST00000553529 PRORYQ9H606 182 aa18.05■□□□□ 0.48
SHMT2-206ENST00000553529 SCHIP1Q9P0W5 487 aaPredicted RBP18.05■□□□□ 0.48
SHMT2-206ENST00000553529 PISDQ9UG56 409 aa18.05■□□□□ 0.48
SHMT2-206ENST00000553529 ADGRG1Q9Y653 693 aa18.05■□□□□ 0.48
SHMT2-206ENST00000553529 CCDC187A0A096LP49 1063 aa18.04■□□□□ 0.48
SHMT2-206ENST00000553529 TCRBV7S2A1N4TA0A589 114 aa18.04■□□□□ 0.48
SHMT2-206ENST00000553529 RHPN2P1A8MT19 583 aa18.04■□□□□ 0.48
SHMT2-206ENST00000553529 H7C0C1 242 aa18.04■□□□□ 0.48
SHMT2-206ENST00000553529 NUDT21O43809 227 aaKnown RBP18.04■□□□□ 0.48
SHMT2-206ENST00000553529 SNX2O60749 519 aa18.04■□□□□ 0.48
SHMT2-206ENST00000553529 FTCDO95954 541 aa18.04■□□□□ 0.48
SHMT2-206ENST00000553529 AGTP01019 485 aa18.04■□□□□ 0.48
SHMT2-206ENST00000553529 CD1CP29017 333 aa18.04■□□□□ 0.48
SHMT2-206ENST00000553529 ATP5OP48047 213 aa18.04■□□□□ 0.48
SHMT2-206ENST00000553529 VAV2P52735 878 aa18.04■□□□□ 0.48
SHMT2-206ENST00000553529 PCBP4P57723 403 aaKnown RBP18.04■□□□□ 0.48
SHMT2-206ENST00000553529 CXADRP78310 365 aa18.04■□□□□ 0.48
SHMT2-206ENST00000553529 ZFP36L1Q07352 338 aaKnown RBP18.04■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms