RNA–Protein interactions for RNA: ENST00000553324.5

SHMT2-204, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-204ENST00000553324 CCDC110Q8TBZ0 833 aa15.22■□□□□ 0.03
SHMT2-204ENST00000553324 BLOC1S5Q8TDH9 187 aa15.22■□□□□ 0.03
SHMT2-204ENST00000553324 OR2M4Q96R27 311 aa15.22■□□□□ 0.03
SHMT2-204ENST00000553324 FAM118BQ9BPY3 351 aa15.22■□□□□ 0.03
SHMT2-204ENST00000553324 DKK4Q9UBT3 224 aa15.22■□□□□ 0.03
SHMT2-204ENST00000553324 ZNHIT2Q9UHR6 403 aa15.22■□□□□ 0.03
SHMT2-204ENST00000553324 APPL1Q9UKG1 709 aa15.22■□□□□ 0.03
SHMT2-204ENST00000553324 PKP3Q9Y446 797 aa15.22■□□□□ 0.03
SHMT2-204ENST00000553324 KNTC1P50748 2209 aa15.22■□□□□ 0.03
SHMT2-204ENST00000553324 FADS2P1A8MWK0 482 aa15.21■□□□□ 0.03
SHMT2-204ENST00000553324 F5H423 210 aaPredicted RBP15.21■□□□□ 0.03
SHMT2-204ENST00000553324 NUDT21O43809 227 aaKnown RBP15.21■□□□□ 0.03
SHMT2-204ENST00000553324 AGTP01019 485 aa15.21■□□□□ 0.03
SHMT2-204ENST00000553324 SLC4A1P02730 911 aa15.21■□□□□ 0.03
SHMT2-204ENST00000553324 BPIP17213 487 aa15.21■□□□□ 0.03
SHMT2-204ENST00000553324 PSMB4P28070 264 aa15.21■□□□□ 0.03
SHMT2-204ENST00000553324 CTBSQ01459 385 aa15.21■□□□□ 0.03
SHMT2-204ENST00000553324 P3H1Q32P28 736 aa15.21■□□□□ 0.03
SHMT2-204ENST00000553324 C14orf28Q4W4Y0 310 aa15.21■□□□□ 0.03
SHMT2-204ENST00000553324 NYAP1Q6ZVC0 841 aa15.21■□□□□ 0.03
SHMT2-204ENST00000553324 SLC13A5Q86YT5 568 aaPredicted RBP15.21■□□□□ 0.03
SHMT2-204ENST00000553324 PHYKPLQ8IUZ5 450 aa15.21■□□□□ 0.03
SHMT2-204ENST00000553324 FAM71DQ8N9W8 422 aa15.21■□□□□ 0.03
SHMT2-204ENST00000553324 KYQ8NBH2 561 aa15.21■□□□□ 0.03
SHMT2-204ENST00000553324 CCL4L1Q8NHW4 92 aa15.21■□□□□ 0.03
SHMT2-204ENST00000553324 BRSK1Q8TDC3 778 aa15.21■□□□□ 0.03
SHMT2-204ENST00000553324 ZDHHC1Q8WTX9 485 aa15.21■□□□□ 0.03
SHMT2-204ENST00000553324 MAIP1Q8WWC4 291 aa15.21■□□□□ 0.03
SHMT2-204ENST00000553324 GLYATL1Q969I3 302 aa15.21■□□□□ 0.03
SHMT2-204ENST00000553324 CCDC3Q9BQI4 270 aa15.21■□□□□ 0.03
SHMT2-204ENST00000553324 SUDS3Q9H7L9 328 aaPredicted RBP15.21■□□□□ 0.03
SHMT2-204ENST00000553324 TAAR2Q9P1P5 351 aa15.21■□□□□ 0.03
SHMT2-204ENST00000553324 PPP2R2CQ9Y2T4 447 aa15.21■□□□□ 0.03
SHMT2-204ENST00000553324 SPO11Q9Y5K1 396 aa15.21■□□□□ 0.03
SHMT2-204ENST00000553324 CEP295Q9C0D2 2601 aa15.21■□□□□ 0.03
SHMT2-204ENST00000553324 TMX2-CTNND1H3BSU7 103 aa15.2■□□□□ 0.02
SHMT2-204ENST00000553324 AURKAO14965 403 aa15.2■□□□□ 0.02
SHMT2-204ENST00000553324 VEGFDO43915 354 aa15.2■□□□□ 0.02
SHMT2-204ENST00000553324 NUAK1O60285 661 aa15.2■□□□□ 0.02
SHMT2-204ENST00000553324 DNAJC6O75061 913 aa15.2■□□□□ 0.02
SHMT2-204ENST00000553324 ATP1A1P05023 1023 aaKnown RBP15.2■□□□□ 0.02
SHMT2-204ENST00000553324 ADRA1AP35348 466 aa15.2■□□□□ 0.02
SHMT2-204ENST00000553324 ACTN2P35609 894 aa15.2■□□□□ 0.02
SHMT2-204ENST00000553324 CHRNA4P43681 627 aa15.2■□□□□ 0.02
SHMT2-204ENST00000553324 ALS2CLQ60I27 953 aa15.2■□□□□ 0.02
SHMT2-204ENST00000553324 RBM44Q6ZP01 1051 aaKnown RBP15.2■□□□□ 0.02
SHMT2-204ENST00000553324 MARK2Q7KZI7 788 aaKnown RBP15.2■□□□□ 0.02
SHMT2-204ENST00000553324 TRIM74Q86UV6 250 aa15.2■□□□□ 0.02
SHMT2-204ENST00000553324 NRROSQ86YC3 692 aa15.2■□□□□ 0.02
SHMT2-204ENST00000553324 KLHDC8BQ8IXV7 354 aa15.2■□□□□ 0.02
SHMT2-204ENST00000553324 TTC30BQ8N4P2 665 aa15.2■□□□□ 0.02
SHMT2-204ENST00000553324 ZCCHC14Q8WYQ9 949 aaKnown RBP15.2■□□□□ 0.02
SHMT2-204ENST00000553324 NXPE2Q96DL1 559 aa15.2■□□□□ 0.02
SHMT2-204ENST00000553324 VPS35Q96QK1 796 aa15.2■□□□□ 0.02
SHMT2-204ENST00000553324 C19orf43Q9BQ61 176 aa15.2■□□□□ 0.02
SHMT2-204ENST00000553324 TMEM121Q9BTD3 319 aa15.2■□□□□ 0.02
SHMT2-204ENST00000553324 FICDQ9BVA6 458 aa15.2■□□□□ 0.02
SHMT2-204ENST00000553324 ARNT2Q9HBZ2 717 aa15.2■□□□□ 0.02
SHMT2-204ENST00000553324 BPIFA1Q9NP55 256 aa15.2■□□□□ 0.02
SHMT2-204ENST00000553324 SPATS2LQ9NUQ6 558 aaKnown RBP15.2■□□□□ 0.02
SHMT2-204ENST00000553324 IL17CQ9P0M4 197 aa15.2■□□□□ 0.02
SHMT2-204ENST00000553324 LRIT1Q9P2V4 623 aa15.2■□□□□ 0.02
SHMT2-204ENST00000553324 ZKSCAN5Q9Y2L8 839 aa15.2■□□□□ 0.02
SHMT2-204ENST00000553324 CHD8Q9HCK8 2581 aa15.2■□□□□ 0.02
SHMT2-204ENST00000553324 WDFY3Q8IZQ1 3526 aa15.19■□□□□ 0.02
SHMT2-204ENST00000553324 GOLGA4Q13439 2230 aaKnown RBP15.19■□□□□ 0.02
SHMT2-204ENST00000553324 B4DGG1 531 aa15.19■□□□□ 0.02
SHMT2-204ENST00000553324 STX7O15400 261 aaKnown RBP15.19■□□□□ 0.02
SHMT2-204ENST00000553324 GRID2O43424 1007 aa15.19■□□□□ 0.02
SHMT2-204ENST00000553324 NOBOXO60393 691 aa15.19■□□□□ 0.02
SHMT2-204ENST00000553324 CRTAMO95727 393 aa15.19■□□□□ 0.02
SHMT2-204ENST00000553324 CAPNS1P04632 268 aa15.19■□□□□ 0.02
SHMT2-204ENST00000553324 LPOP22079 712 aaPredicted RBP15.19■□□□□ 0.02
SHMT2-204ENST00000553324 AK4P27144 223 aaPredicted RBP15.19■□□□□ 0.02
SHMT2-204ENST00000553324 SPAM1P38567 509 aa15.19■□□□□ 0.02
SHMT2-204ENST00000553324 ACTR1BP42025 376 aa15.19■□□□□ 0.02
SHMT2-204ENST00000553324 ACTR1AP61163 376 aa15.19■□□□□ 0.02
SHMT2-204ENST00000553324 BIRC2Q13490 618 aa15.19■□□□□ 0.02
SHMT2-204ENST00000553324 ITGA9Q13797 1035 aa15.19■□□□□ 0.02
SHMT2-204ENST00000553324 SPIDRQ14159 915 aa15.19■□□□□ 0.02
SHMT2-204ENST00000553324 HLTFQ14527 1009 aaKnown RBP eCLIP15.19■□□□□ 0.02
SHMT2-204ENST00000553324 RTP5Q14D33 572 aa15.19■□□□□ 0.02
SHMT2-204ENST00000553324 TAF1AQ15573 450 aaPredicted RBP15.19■□□□□ 0.02
SHMT2-204ENST00000553324 PERM1Q5SV97 790 aa15.19■□□□□ 0.02
SHMT2-204ENST00000553324 CERCAMQ5T4B2 595 aa15.19■□□□□ 0.02
SHMT2-204ENST00000553324 SLC30A9Q6PML9 568 aa15.19■□□□□ 0.02
SHMT2-204ENST00000553324 C17orf82Q86X59 251 aaPredicted RBP15.19■□□□□ 0.02
SHMT2-204ENST00000553324 MARCH9Q86YJ5 346 aa15.19■□□□□ 0.02
SHMT2-204ENST00000553324 RTP4Q96DX8 246 aa15.19■□□□□ 0.02
SHMT2-204ENST00000553324 TTC25Q96NG3 672 aa15.19■□□□□ 0.02
SHMT2-204ENST00000553324 TBL1YQ9BQ87 522 aa15.19■□□□□ 0.02
SHMT2-204ENST00000553324 LRRC40Q9H9A6 602 aa15.19■□□□□ 0.02
SHMT2-204ENST00000553324 IL26Q9NPH9 171 aa15.19■□□□□ 0.02
SHMT2-204ENST00000553324 ZMIZ1Q9ULJ6 1067 aa15.19■□□□□ 0.02
SHMT2-204ENST00000553324 ZNF148Q9UQR1 794 aa15.19■□□□□ 0.02
SHMT2-204ENST00000553324 R3HDM2Q9Y2K5 976 aaKnown RBP15.19■□□□□ 0.02
SHMT2-204ENST00000553324 OAS3Q9Y6K5 1087 aaKnown RBP15.19■□□□□ 0.02
SHMT2-204ENST00000553324 FRYQ5TBA9 3013 aa15.18■□□□□ 0.02
SHMT2-204ENST00000553324 TCRBV7S2A1N4TA0A589 114 aa15.18■□□□□ 0.02
SHMT2-204ENST00000553324 ZSCAN12O43309 604 aa15.18■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms