RNA–Protein interactions for RNA: ENST00000553280.1

SCFD1-209, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 574 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-209ENST00000553280 SPOCK1Q08629 439 aa5.06□□□□□ -1.6
SCFD1-209ENST00000553280 INPP5JQ15735 1006 aaPredicted RBP5.06□□□□□ -1.6
SCFD1-209ENST00000553280 LETM2Q2VYF4 491 aa5.06□□□□□ -1.6
SCFD1-209ENST00000553280 DHRS7BQ6IAN0 325 aaPredicted RBP5.06□□□□□ -1.6
SCFD1-209ENST00000553280 MFSD6Q6ZSS7 791 aa5.06□□□□□ -1.6
SCFD1-209ENST00000553280 ADIPOR2Q86V24 386 aa5.06□□□□□ -1.6
SCFD1-209ENST00000553280 METTL23Q86XA0 190 aa5.06□□□□□ -1.6
SCFD1-209ENST00000553280 OR10S1Q8NGN2 331 aa5.06□□□□□ -1.6
SCFD1-209ENST00000553280 KIF18AQ8NI77 898 aa5.06□□□□□ -1.6
SCFD1-209ENST00000553280 DEPDC1BQ8WUY9 529 aa5.06□□□□□ -1.6
SCFD1-209ENST00000553280 GBP5Q96PP8 586 aa5.06□□□□□ -1.6
SCFD1-209ENST00000553280 DESI2Q9BSY9 194 aa5.06□□□□□ -1.6
SCFD1-209ENST00000553280 QTRT1Q9BXR0 403 aaKnown RBP5.06□□□□□ -1.6
SCFD1-209ENST00000553280 TMEM39BQ9GZU3 492 aa5.06□□□□□ -1.6
SCFD1-209ENST00000553280 PPIL3Q9H2H8 161 aaKnown RBP5.06□□□□□ -1.6
SCFD1-209ENST00000553280 KCNK15Q9H427 330 aa5.06□□□□□ -1.6
SCFD1-209ENST00000553280 PPP1R3EQ9H7J1 279 aa5.06□□□□□ -1.6
SCFD1-209ENST00000553280 XAB2Q9HCS7 855 aaKnown RBP5.06□□□□□ -1.6
SCFD1-209ENST00000553280 PFDN4Q9NQP4 134 aa5.06□□□□□ -1.6
SCFD1-209ENST00000553280 OLAHQ9NV23 265 aa5.06□□□□□ -1.6
SCFD1-209ENST00000553280 HAO2Q9NYQ3 351 aa5.06□□□□□ -1.6
SCFD1-209ENST00000553280 FLRT1Q9NZU1 646 aa5.06□□□□□ -1.6
SCFD1-209ENST00000553280 HACL1Q9UJ83 578 aa5.06□□□□□ -1.6
SCFD1-209ENST00000553280 RASAL2Q9UJF2 1139 aa5.06□□□□□ -1.6
SCFD1-209ENST00000553280 PCDHA12Q9UN75 941 aa5.06□□□□□ -1.6
SCFD1-209ENST00000553280 ZSCAN21Q9Y5A6 473 aaPredicted RBP5.06□□□□□ -1.6
SCFD1-209ENST00000553280 WIPF3A6NGB9 483 aa5.05□□□□□ -1.6
SCFD1-209ENST00000553280 M0QZ24 198 aa5.05□□□□□ -1.6
SCFD1-209ENST00000553280 BCL10O95999 233 aa5.05□□□□□ -1.6
SCFD1-209ENST00000553280 GH2P01242 217 aa5.05□□□□□ -1.6
SCFD1-209ENST00000553280 ERCC2P18074 760 aa5.05□□□□□ -1.6
SCFD1-209ENST00000553280 GNLYP22749 145 aa5.05□□□□□ -1.6
SCFD1-209ENST00000553280 HOXC8P31273 242 aa5.05□□□□□ -1.6
SCFD1-209ENST00000553280 MC5RP33032 325 aa5.05□□□□□ -1.6
SCFD1-209ENST00000553280 PIGAP37287 484 aa5.05□□□□□ -1.6
SCFD1-209ENST00000553280 SELENOVP59797 346 aa5.05□□□□□ -1.6
SCFD1-209ENST00000553280 SIRPAP78324 504 aa5.05□□□□□ -1.6
SCFD1-209ENST00000553280 PLIN5Q00G26 463 aa5.05□□□□□ -1.6
SCFD1-209ENST00000553280 MTX1Q13505 466 aa5.05□□□□□ -1.6
SCFD1-209ENST00000553280 SNAPC1Q16533 368 aa5.05□□□□□ -1.6
SCFD1-209ENST00000553280 C11orf88Q6PI97 169 aa5.05□□□□□ -1.6
SCFD1-209ENST00000553280 ERN2Q76MJ5 926 aaKnown RBP5.05□□□□□ -1.6
SCFD1-209ENST00000553280 LDB1Q86U70 411 aaPredicted RBP5.05□□□□□ -1.6
SCFD1-209ENST00000553280 ANKRD13BQ86YJ7 626 aa5.05□□□□□ -1.6
SCFD1-209ENST00000553280 PI4KAP1Q8N8J0 262 aa5.05□□□□□ -1.6
SCFD1-209ENST00000553280 CFAP61Q8NHU2 1237 aa5.05□□□□□ -1.6
SCFD1-209ENST00000553280 ADAMTS14Q8WXS8 1223 aa5.05□□□□□ -1.6
SCFD1-209ENST00000553280 TRIB2Q92519 343 aa5.05□□□□□ -1.6
SCFD1-209ENST00000553280 MRPS27Q92552 414 aaKnown RBP5.05□□□□□ -1.6
SCFD1-209ENST00000553280 HDAC11Q96DB2 347 aa5.05□□□□□ -1.6
SCFD1-209ENST00000553280 LINC00615Q96LM1 132 aaPredicted RBP5.05□□□□□ -1.6
SCFD1-209ENST00000553280 ZNF830Q96NB3 372 aaPredicted RBP5.05□□□□□ -1.6
SCFD1-209ENST00000553280 SLC25A23Q9BV35 468 aa5.05□□□□□ -1.6
SCFD1-209ENST00000553280 SLCO5A1Q9H2Y9 848 aa5.05□□□□□ -1.6
SCFD1-209ENST00000553280 WDR26Q9H7D7 661 aa5.05□□□□□ -1.6
SCFD1-209ENST00000553280 DNAJC18Q9H819 358 aa5.05□□□□□ -1.6
SCFD1-209ENST00000553280 MMP25Q9NPA2 562 aa5.05□□□□□ -1.6
SCFD1-209ENST00000553280 TMEM51Q9NW97 253 aa5.05□□□□□ -1.6
SCFD1-209ENST00000553280 LARSQ9P2J5 1176 aaKnown RBP5.05□□□□□ -1.6
SCFD1-209ENST00000553280 SLC9A2Q9UBY0 812 aa5.05□□□□□ -1.6
SCFD1-209ENST00000553280 IL17BQ9UHF5 180 aa5.05□□□□□ -1.6
SCFD1-209ENST00000553280 DDX25Q9UHL0 483 aaKnown RBP5.05□□□□□ -1.6
SCFD1-209ENST00000553280 TSPYL4Q9UJ04 414 aa5.05□□□□□ -1.6
SCFD1-209ENST00000553280 DBNLQ9UJU6 430 aaKnown RBP5.05□□□□□ -1.6
SCFD1-209ENST00000553280 TTC7AQ9ULT0 858 aaPredicted RBP5.05□□□□□ -1.6
SCFD1-209ENST00000553280 A0A0U1RQG5 324 aaPredicted RBP5.04□□□□□ -1.6
SCFD1-209ENST00000553280 EDDM13A0A1B0GTR0 161 aa5.04□□□□□ -1.6
SCFD1-209ENST00000553280 TMEM8BA6NDV4 472 aa5.04□□□□□ -1.6
SCFD1-209ENST00000553280 E5RJQ4 531 aa5.04□□□□□ -1.6
SCFD1-209ENST00000553280 WDR46O15213 610 aaKnown RBP5.04□□□□□ -1.6
SCFD1-209ENST00000553280 SLC7A4O43246 635 aa5.04□□□□□ -1.6
SCFD1-209ENST00000553280 SPRY1O43609 319 aaPredicted RBP5.04□□□□□ -1.6
SCFD1-209ENST00000553280 LDB2O43679 373 aa5.04□□□□□ -1.6
SCFD1-209ENST00000553280 G6PDP11413 515 aa5.04□□□□□ -1.6
SCFD1-209ENST00000553280 FDPSP14324 419 aaKnown RBP5.04□□□□□ -1.6
SCFD1-209ENST00000553280 ARHGAP25P42331 645 aa5.04□□□□□ -1.6
SCFD1-209ENST00000553280 RAB28P51157 221 aa5.04□□□□□ -1.6
SCFD1-209ENST00000553280 HYAL4Q2M3T9 481 aa5.04□□□□□ -1.6
SCFD1-209ENST00000553280 ARMC4Q5T2S8 1044 aa5.04□□□□□ -1.6
SCFD1-209ENST00000553280 SLC18B1Q6NT16 456 aa5.04□□□□□ -1.6
SCFD1-209ENST00000553280 TRAT1Q6PIZ9 186 aa5.04□□□□□ -1.6
SCFD1-209ENST00000553280 PARM1Q6UWI2 310 aa5.04□□□□□ -1.6
SCFD1-209ENST00000553280 SUSD1Q6UWL2 747 aa5.04□□□□□ -1.6
SCFD1-209ENST00000553280 MON1BQ7L1V2 547 aa5.04□□□□□ -1.6
SCFD1-209ENST00000553280 HAUS6Q7Z4H7 955 aa5.04□□□□□ -1.6
SCFD1-209ENST00000553280 IQCHQ86VS3 1027 aa5.04□□□□□ -1.6
SCFD1-209ENST00000553280 PALB2Q86YC2 1186 aa5.04□□□□□ -1.6
SCFD1-209ENST00000553280 CNGA4Q8IV77 575 aa5.04□□□□□ -1.6
SCFD1-209ENST00000553280 RBM15BQ8NDT2 890 aaKnown RBP5.04□□□□□ -1.6
SCFD1-209ENST00000553280 OR1J2Q8NGS2 313 aa5.04□□□□□ -1.6
SCFD1-209ENST00000553280 HM13Q8TCT9 377 aa5.04□□□□□ -1.6
SCFD1-209ENST00000553280 TEKT4Q8WW24 435 aa5.04□□□□□ -1.6
SCFD1-209ENST00000553280 APBB2Q92870 758 aa5.04□□□□□ -1.6
SCFD1-209ENST00000553280 SPAG5Q96R06 1193 aa5.04□□□□□ -1.6
SCFD1-209ENST00000553280 HGH1Q9BTY7 390 aa5.04□□□□□ -1.6
SCFD1-209ENST00000553280 NUP85Q9BW27 656 aa5.04□□□□□ -1.6
SCFD1-209ENST00000553280 PRSS22Q9GZN4 317 aa5.04□□□□□ -1.6
SCFD1-209ENST00000553280 GOLPH3LQ9H4A5 285 aa5.04□□□□□ -1.6
SCFD1-209ENST00000553280 CLK4Q9HAZ1 481 aaKnown RBP5.04□□□□□ -1.6
SCFD1-209ENST00000553280 FZD3Q9NPG1 666 aa5.04□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms