RNA–Protein interactions for RNA: ENST00000552829.2

SUPT16H-202, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 669 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-202ENST00000552829 RBMXL3Q8N7X1 1067 aaKnown RBP11.28□□□□□ -0.6
SUPT16H-202ENST00000552829 THAP4Q8WY91 577 aa11.28□□□□□ -0.6
SUPT16H-202ENST00000552829 MARVELD3Q96A59 401 aa11.28□□□□□ -0.6
SUPT16H-202ENST00000552829 C19orf60Q96EN9 201 aa11.28□□□□□ -0.6
SUPT16H-202ENST00000552829 RNF31Q96EP0 1072 aa11.28□□□□□ -0.6
SUPT16H-202ENST00000552829 DTD2Q96FN9 168 aa11.28□□□□□ -0.6
SUPT16H-202ENST00000552829 C5orf34Q96MH7 638 aa11.28□□□□□ -0.6
SUPT16H-202ENST00000552829 SIX2Q9NPC8 291 aa11.28□□□□□ -0.6
SUPT16H-202ENST00000552829 UBA2Q9UBT2 640 aaPredicted RBP11.28□□□□□ -0.6
SUPT16H-202ENST00000552829 B4GALT6Q9UBX8 382 aa11.28□□□□□ -0.6
SUPT16H-202ENST00000552829 METRNQ9UJH8 293 aa11.28□□□□□ -0.6
SUPT16H-202ENST00000552829 PADI1Q9ULC6 663 aa11.28□□□□□ -0.6
SUPT16H-202ENST00000552829 ENTPD4Q9Y227 616 aa11.28□□□□□ -0.6
SUPT16H-202ENST00000552829 ZNF451Q9Y4E5 1061 aa11.28□□□□□ -0.6
SUPT16H-202ENST00000552829 PIKFYVEQ9Y2I7 2098 aa11.28□□□□□ -0.6
SUPT16H-202ENST00000552829 SPTBP11277 2137 aa11.27□□□□□ -0.6
SUPT16H-202ENST00000552829 A6NCN8 305 aa11.27□□□□□ -0.61
SUPT16H-202ENST00000552829 A8MX80 341 aa11.27□□□□□ -0.61
SUPT16H-202ENST00000552829 C21orf140B9A014 251 aa11.27□□□□□ -0.61
SUPT16H-202ENST00000552829 J3KR12 359 aa11.27□□□□□ -0.61
SUPT16H-202ENST00000552829 PRAMEF11O60813 436 aa11.27□□□□□ -0.61
SUPT16H-202ENST00000552829 SOD1P00441 154 aa11.27□□□□□ -0.61
SUPT16H-202ENST00000552829 FGF5P12034 268 aa11.27□□□□□ -0.61
SUPT16H-202ENST00000552829 PON1P27169 355 aa11.27□□□□□ -0.61
SUPT16H-202ENST00000552829 GARSP41250 739 aaKnown RBP11.27□□□□□ -0.61
SUPT16H-202ENST00000552829 HDAC4P56524 1084 aa11.27□□□□□ -0.61
SUPT16H-202ENST00000552829 POLR2LP62875 67 aaKnown RBP11.27□□□□□ -0.61
SUPT16H-202ENST00000552829 HHEXQ03014 270 aa11.27□□□□□ -0.61
SUPT16H-202ENST00000552829 DPTQ07507 201 aa11.27□□□□□ -0.61
SUPT16H-202ENST00000552829 MAN2A1Q16706 1144 aa11.27□□□□□ -0.61
SUPT16H-202ENST00000552829 ZRANB3Q5FWF4 1079 aa11.27□□□□□ -0.61
SUPT16H-202ENST00000552829 MIIPQ5JXC2 388 aa11.27□□□□□ -0.61
SUPT16H-202ENST00000552829 SLC6A19Q695T7 634 aa11.27□□□□□ -0.61
SUPT16H-202ENST00000552829 IYDQ6PHW0 289 aa11.27□□□□□ -0.61
SUPT16H-202ENST00000552829 STRADAQ7RTN6 431 aa11.27□□□□□ -0.61
SUPT16H-202ENST00000552829 ZNF354CQ86Y25 554 aa11.27□□□□□ -0.61
SUPT16H-202ENST00000552829 HPS6Q86YV9 775 aa11.27□□□□□ -0.61
SUPT16H-202ENST00000552829 TSEN2Q8NCE0 465 aaKnown RBP11.27□□□□□ -0.61
SUPT16H-202ENST00000552829 CT55Q8WUE5 264 aa11.27□□□□□ -0.61
SUPT16H-202ENST00000552829 RXFP2Q8WXD0 754 aa11.27□□□□□ -0.61
SUPT16H-202ENST00000552829 NTAN1Q96AB6 310 aa11.27□□□□□ -0.61
SUPT16H-202ENST00000552829 PNPLA2Q96AD5 504 aa11.27□□□□□ -0.61
SUPT16H-202ENST00000552829 STAMBPL1Q96FJ0 436 aa11.27□□□□□ -0.61
SUPT16H-202ENST00000552829 RANBP9Q96S59 729 aa11.27□□□□□ -0.61
SUPT16H-202ENST00000552829 KCNF1Q9H3M0 494 aa11.27□□□□□ -0.61
SUPT16H-202ENST00000552829 EPB41L1Q9H4G0 881 aa11.27□□□□□ -0.61
SUPT16H-202ENST00000552829 ACTL8Q9H568 366 aa11.27□□□□□ -0.61
SUPT16H-202ENST00000552829 LRRC19Q9H756 370 aa11.27□□□□□ -0.61
SUPT16H-202ENST00000552829 C2CD4BA6NLJ0 364 aa11.26□□□□□ -0.61
SUPT16H-202ENST00000552829 KRT86O43790 486 aa11.26□□□□□ -0.61
SUPT16H-202ENST00000552829 DPM1O60762 260 aa11.26□□□□□ -0.61
SUPT16H-202ENST00000552829 LRCH4O75427 683 aa11.26□□□□□ -0.61
SUPT16H-202ENST00000552829 SPAG6O75602 509 aa11.26□□□□□ -0.61
SUPT16H-202ENST00000552829 HEXIM1O94992 359 aaKnown RBP11.26□□□□□ -0.61
SUPT16H-202ENST00000552829 NDUFA10O95299 355 aa11.26□□□□□ -0.61
SUPT16H-202ENST00000552829 PNMA6AP0CW24 399 aaPredicted RBP11.26□□□□□ -0.61
SUPT16H-202ENST00000552829 EPHB2P29323 1055 aa11.26□□□□□ -0.61
SUPT16H-202ENST00000552829 PBX1P40424 430 aa11.26□□□□□ -0.61
SUPT16H-202ENST00000552829 ETV3P41162 512 aa11.26□□□□□ -0.61
SUPT16H-202ENST00000552829 PTPN9P43378 593 aa11.26□□□□□ -0.61
SUPT16H-202ENST00000552829 KLK7P49862 253 aa11.26□□□□□ -0.61
SUPT16H-202ENST00000552829 CCL11P51671 97 aa11.26□□□□□ -0.61
SUPT16H-202ENST00000552829 SH3BP2P78314 561 aa11.26□□□□□ -0.61
SUPT16H-202ENST00000552829 FOXM1Q08050 763 aa11.26□□□□□ -0.61
SUPT16H-202ENST00000552829 NSUN2Q08J23 767 aaKnown RBP eCLIP11.26□□□□□ -0.61
SUPT16H-202ENST00000552829 CHAF1BQ13112 559 aa11.26□□□□□ -0.61
SUPT16H-202ENST00000552829 LRP8Q14114 963 aa11.26□□□□□ -0.61
SUPT16H-202ENST00000552829 NR6A1Q15406 480 aa11.26□□□□□ -0.61
SUPT16H-202ENST00000552829 CHRNA6Q15825 494 aa11.26□□□□□ -0.61
SUPT16H-202ENST00000552829 CDO1Q16878 200 aa11.26□□□□□ -0.61
SUPT16H-202ENST00000552829 LARP7Q4G0J3 582 aaKnown RBP eCLIP11.26□□□□□ -0.61
SUPT16H-202ENST00000552829 VWA3BQ502W6 1294 aa11.26□□□□□ -0.61
SUPT16H-202ENST00000552829 FKBP15Q5T1M5 1219 aa11.26□□□□□ -0.61
SUPT16H-202ENST00000552829 DPY19L2P1Q6NXN4 242 aa11.26□□□□□ -0.61
SUPT16H-202ENST00000552829 GBP6Q6ZN66 633 aa11.26□□□□□ -0.61
SUPT16H-202ENST00000552829 HSD11B1LQ7Z5J1 315 aa11.26□□□□□ -0.61
SUPT16H-202ENST00000552829 TECPR1Q7Z6L1 1165 aa11.26□□□□□ -0.61
SUPT16H-202ENST00000552829 PHLDB2Q86SQ0 1253 aa11.26□□□□□ -0.61
SUPT16H-202ENST00000552829 PLXDC1Q8IUK5 500 aa11.26□□□□□ -0.61
SUPT16H-202ENST00000552829 TP53INP2Q8IXH6 220 aa11.26□□□□□ -0.61
SUPT16H-202ENST00000552829 PYROXD2Q8N2H3 581 aa11.26□□□□□ -0.61
SUPT16H-202ENST00000552829 ZNF454Q8N9F8 522 aa11.26□□□□□ -0.61
SUPT16H-202ENST00000552829 SEC14L1Q92503 715 aa11.26□□□□□ -0.61
SUPT16H-202ENST00000552829 SH3KBP1Q96B97 665 aa11.26□□□□□ -0.61
SUPT16H-202ENST00000552829 SNRNP40Q96DI7 357 aaKnown RBP11.26□□□□□ -0.61
SUPT16H-202ENST00000552829 C9orf72Q96LT7 481 aa11.26□□□□□ -0.61
SUPT16H-202ENST00000552829 RUFY1Q96T51 708 aa11.26□□□□□ -0.61
SUPT16H-202ENST00000552829 UNKQ9C0B0 810 aaKnown RBP11.26□□□□□ -0.61
SUPT16H-202ENST00000552829 BRD8Q9H0E9 1235 aa11.26□□□□□ -0.61
SUPT16H-202ENST00000552829 ING2Q9H160 280 aa11.26□□□□□ -0.61
SUPT16H-202ENST00000552829 SLAMF7Q9NQ25 335 aa11.26□□□□□ -0.61
SUPT16H-202ENST00000552829 LHX9Q9NQ69 397 aa11.26□□□□□ -0.61
SUPT16H-202ENST00000552829 OGFRQ9NZT2 677 aa11.26□□□□□ -0.61
SUPT16H-202ENST00000552829 LUZP4Q9P127 313 aa11.26□□□□□ -0.61
SUPT16H-202ENST00000552829 IMPACTQ9P2X3 320 aa11.26□□□□□ -0.61
SUPT16H-202ENST00000552829 KLHL3Q9UH77 587 aa11.26□□□□□ -0.61
SUPT16H-202ENST00000552829 TMEM98Q9Y2Y6 226 aa11.26□□□□□ -0.61
SUPT16H-202ENST00000552829 CNTRLQ7Z7A1 2325 aa11.26□□□□□ -0.61
SUPT16H-202ENST00000552829 GTPBP10A4D1E9 387 aaKnown RBP11.25□□□□□ -0.61
SUPT16H-202ENST00000552829 LILRA5A6NI73 299 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms