RNA–Protein interactions for RNA: ENST00000551716.5

CACNB3-220, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-220ENST00000551716 SP110Q9HB58 689 aa15.14■□□□□ 0.01
CACNB3-220ENST00000551716 PDE7BQ9NP56 450 aa15.14■□□□□ 0.01
CACNB3-220ENST00000551716 TBC1D29Q9UFV1 150 aa15.14■□□□□ 0.01
CACNB3-220ENST00000551716 AJAP1Q9UKB5 411 aaPredicted RBP15.14■□□□□ 0.01
CACNB3-220ENST00000551716 SSU72P8A0A1W2PR75 194 aa15.13■□□□□ 0.01
CACNB3-220ENST00000551716 ARGFXA6NJG6 315 aa15.13■□□□□ 0.01
CACNB3-220ENST00000551716 ASMTLO95671 621 aa15.13■□□□□ 0.01
CACNB3-220ENST00000551716 EML2O95834 649 aa15.13■□□□□ 0.01
CACNB3-220ENST00000551716 CPP00450 1065 aa15.13■□□□□ 0.01
CACNB3-220ENST00000551716 F3P13726 295 aa15.13■□□□□ 0.01
CACNB3-220ENST00000551716 GPD1P21695 349 aa15.13■□□□□ 0.01
CACNB3-220ENST00000551716 LPOP22079 712 aaPredicted RBP15.13■□□□□ 0.01
CACNB3-220ENST00000551716 HSPA9P38646 679 aaKnown RBP15.13■□□□□ 0.01
CACNB3-220ENST00000551716 TPI1P60174 286 aa15.13■□□□□ 0.01
CACNB3-220ENST00000551716 PDE1BQ01064 536 aa15.13■□□□□ 0.01
CACNB3-220ENST00000551716 IL10RBQ08334 325 aa15.13■□□□□ 0.01
CACNB3-220ENST00000551716 KRTAP21-3Q3LHN1 58 aa15.13■□□□□ 0.01
CACNB3-220ENST00000551716 PRR30Q53SZ7 412 aaPredicted RBP15.13■□□□□ 0.01
CACNB3-220ENST00000551716 USP45Q70EL2 814 aa15.13■□□□□ 0.01
CACNB3-220ENST00000551716 ZNF765Q7L2R6 523 aa15.13■□□□□ 0.01
CACNB3-220ENST00000551716 TECPR1Q7Z6L1 1165 aa15.13■□□□□ 0.01
CACNB3-220ENST00000551716 NOP9Q86U38 636 aaKnown RBP15.13■□□□□ 0.01
CACNB3-220ENST00000551716 IQCKQ8N0W5 287 aa15.13■□□□□ 0.01
CACNB3-220ENST00000551716 EXD1Q8NHP7 514 aa15.13■□□□□ 0.01
CACNB3-220ENST00000551716 JOSD2Q8TAC2 188 aa15.13■□□□□ 0.01
CACNB3-220ENST00000551716 ELMO2Q96JJ3 720 aa15.13■□□□□ 0.01
CACNB3-220ENST00000551716 TBC1D10AQ9BXI6 508 aa15.13■□□□□ 0.01
CACNB3-220ENST00000551716 SLC39A8Q9C0K1 460 aa15.13■□□□□ 0.01
CACNB3-220ENST00000551716 RMI1Q9H9A7 625 aa15.13■□□□□ 0.01
CACNB3-220ENST00000551716 GDPD2Q9HCC8 539 aa15.13■□□□□ 0.01
CACNB3-220ENST00000551716 VPS18Q9P253 973 aa15.13■□□□□ 0.01
CACNB3-220ENST00000551716 FZD10Q9ULW2 581 aa15.13■□□□□ 0.01
CACNB3-220ENST00000551716 PCDHGC4Q9Y5F7 938 aa15.13■□□□□ 0.01
CACNB3-220ENST00000551716 SETD2Q9BYW2 2564 aaPredicted RBP15.13■□□□□ 0.01
CACNB3-220ENST00000551716 FAM170AA1A519 330 aa15.12■□□□□ 0.01
CACNB3-220ENST00000551716 ANKRD62A6NC57 917 aa15.12■□□□□ 0.01
CACNB3-220ENST00000551716 ANKUB1A6NFN9 424 aa15.12■□□□□ 0.01
CACNB3-220ENST00000551716 EIF3CLB5ME19 914 aaKnown RBP15.12■□□□□ 0.01
CACNB3-220ENST00000551716 RASSF9O75901 435 aa15.12■□□□□ 0.01
CACNB3-220ENST00000551716 UBXN7O94888 489 aa15.12■□□□□ 0.01
CACNB3-220ENST00000551716 MMEP08473 750 aa15.12■□□□□ 0.01
CACNB3-220ENST00000551716 DESP17661 470 aa15.12■□□□□ 0.01
CACNB3-220ENST00000551716 AMD1P17707 334 aa15.12■□□□□ 0.01
CACNB3-220ENST00000551716 GRNP28799 593 aaKnown RBP15.12■□□□□ 0.01
CACNB3-220ENST00000551716 RFC1P35251 1148 aaPredicted RBP15.12■□□□□ 0.01
CACNB3-220ENST00000551716 SEPHS1P49903 392 aa15.12■□□□□ 0.01
CACNB3-220ENST00000551716 PER3P56645 1201 aa15.12■□□□□ 0.01
CACNB3-220ENST00000551716 SH3BP2P78314 561 aa15.12■□□□□ 0.01
CACNB3-220ENST00000551716 SLC6A19Q695T7 634 aa15.12■□□□□ 0.01
CACNB3-220ENST00000551716 CHST15Q7LFX5 561 aaPredicted RBP15.12■□□□□ 0.01
CACNB3-220ENST00000551716 ZDHHC12Q96GR4 267 aa15.12■□□□□ 0.01
CACNB3-220ENST00000551716 CELF6Q96J87 481 aaKnown RBP15.12■□□□□ 0.01
CACNB3-220ENST00000551716 ZNF599Q96NL3 588 aa15.12■□□□□ 0.01
CACNB3-220ENST00000551716 TGM7Q96PF1 710 aa15.12■□□□□ 0.01
CACNB3-220ENST00000551716 EIF3CQ99613 913 aaKnown RBP15.12■□□□□ 0.01
CACNB3-220ENST00000551716 MFRPQ9BY79 579 aa15.12■□□□□ 0.01
CACNB3-220ENST00000551716 ABCG8Q9H221 673 aa15.12■□□□□ 0.01
CACNB3-220ENST00000551716 FARSAQ9Y285 508 aaKnown RBP15.12■□□□□ 0.01
CACNB3-220ENST00000551716 F8P00451 2351 aa15.11■□□□□ 0.01
CACNB3-220ENST00000551716 HEATR9A2RTY3 570 aa15.11■□□□□ 0.01
CACNB3-220ENST00000551716 SNX2O60749 519 aa15.11■□□□□ 0.01
CACNB3-220ENST00000551716 SOD1P00441 154 aa15.11■□□□□ 0.01
CACNB3-220ENST00000551716 CYP1A1P04798 512 aaPredicted RBP15.11■□□□□ 0.01
CACNB3-220ENST00000551716 XRCC1P18887 633 aaPredicted RBP15.11■□□□□ 0.01
CACNB3-220ENST00000551716 LHCGRP22888 699 aa15.11■□□□□ 0.01
CACNB3-220ENST00000551716 MTIF2P46199 727 aaKnown RBP15.11■□□□□ 0.01
CACNB3-220ENST00000551716 GFERP55789 205 aa15.11■□□□□ 0.01
CACNB3-220ENST00000551716 RALGPS1Q5JS13 557 aa15.11■□□□□ 0.01
CACNB3-220ENST00000551716 CPZQ66K79 652 aa15.11■□□□□ 0.01
CACNB3-220ENST00000551716 WDR59Q6PJI9 974 aa15.11■□□□□ 0.01
CACNB3-220ENST00000551716 PRSS42Q7Z5A4 293 aa15.11■□□□□ 0.01
CACNB3-220ENST00000551716 RAVER1Q8IY67 606 aaKnown RBP15.11■□□□□ 0.01
CACNB3-220ENST00000551716 KLHL6Q8WZ60 621 aa15.11■□□□□ 0.01
CACNB3-220ENST00000551716 SNRNP40Q96DI7 357 aaKnown RBP15.11■□□□□ 0.01
CACNB3-220ENST00000551716 COX14Q96I36 57 aa15.11■□□□□ 0.01
CACNB3-220ENST00000551716 MCCC1Q96RQ3 725 aaPredicted RBP15.11■□□□□ 0.01
CACNB3-220ENST00000551716 SELENOOQ9BVL4 669 aa15.11■□□□□ 0.01
CACNB3-220ENST00000551716 KIAA1468Q9P260 1216 aa15.11■□□□□ 0.01
CACNB3-220ENST00000551716 RWDD2AQ9UIY3 292 aa15.11■□□□□ 0.01
CACNB3-220ENST00000551716 RARRES3Q9UL19 164 aa15.11■□□□□ 0.01
CACNB3-220ENST00000551716 PPIL1Q9Y3C6 166 aa15.11■□□□□ 0.01
CACNB3-220ENST00000551716 NPIPB15A6NHN6 443 aaPredicted RBP15.1■□□□□ 0.01
CACNB3-220ENST00000551716 SIGLEC16A6NMB1 481 aa15.1■□□□□ 0.01
CACNB3-220ENST00000551716 DAPK3O43293 454 aa15.1■□□□□ 0.01
CACNB3-220ENST00000551716 DNAJC6O75061 913 aa15.1■□□□□ 0.01
CACNB3-220ENST00000551716 ZNF143P52747 638 aaPredicted RBP15.1■□□□□ 0.01
CACNB3-220ENST00000551716 ITGA1P56199 1179 aa15.1■□□□□ 0.01
CACNB3-220ENST00000551716 CHAF1BQ13112 559 aa15.1■□□□□ 0.01
CACNB3-220ENST00000551716 LBRQ14739 615 aaKnown RBP15.1■□□□□ 0.01
CACNB3-220ENST00000551716 CACHD1Q5VU97 1274 aa15.1■□□□□ 0.01
CACNB3-220ENST00000551716 TRIM72Q6ZMU5 477 aa15.1■□□□□ 0.01
CACNB3-220ENST00000551716 TMEM26Q6ZUK4 368 aa15.1■□□□□ 0.01
CACNB3-220ENST00000551716 ZC3H18Q86VM9 953 aaKnown RBP15.1■□□□□ 0.01
CACNB3-220ENST00000551716 PHYKPLQ8IUZ5 450 aa15.1■□□□□ 0.01
CACNB3-220ENST00000551716 BBS5Q8N3I7 341 aa15.1■□□□□ 0.01
CACNB3-220ENST00000551716 RBMXL3Q8N7X1 1067 aaKnown RBP15.1■□□□□ 0.01
CACNB3-220ENST00000551716 EPS8L1Q8TE68 723 aa15.1■□□□□ 0.01
CACNB3-220ENST00000551716 C19orf60Q96EN9 201 aa15.1■□□□□ 0.01
CACNB3-220ENST00000551716 NUDCD1Q96RS6 583 aa15.1■□□□□ 0.01
CACNB3-220ENST00000551716 C11orf70Q9BRQ4 267 aa15.1■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms