RNA–Protein interactions for RNA: ENST00000551320.1

PRPF40B-214, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-214ENST00000551320 OAS3Q9Y6K5 1087 aaKnown RBP6.82□□□□□ -1.32
PRPF40B-214ENST00000551320 DGKBQ9Y6T7 804 aa6.82□□□□□ -1.32
PRPF40B-214ENST00000551320 IGHV1OR21-1A0A087WYE8 117 aa6.81□□□□□ -1.32
PRPF40B-214ENST00000551320 ARHGAP42A6NI28 874 aa6.81□□□□□ -1.32
PRPF40B-214ENST00000551320 TMEM110-MUSTN1A8MSY1 372 aa6.81□□□□□ -1.32
PRPF40B-214ENST00000551320 LGALS16A8MUM7 142 aa6.81□□□□□ -1.32
PRPF40B-214ENST00000551320 DDX3YO15523 660 aaKnown RBP6.81□□□□□ -1.32
PRPF40B-214ENST00000551320 SNX2O60749 519 aa6.81□□□□□ -1.32
PRPF40B-214ENST00000551320 HEXIM1O94992 359 aaKnown RBP6.81□□□□□ -1.32
PRPF40B-214ENST00000551320 ASMTLO95671 621 aa6.81□□□□□ -1.32
PRPF40B-214ENST00000551320 PEX11BO96011 259 aa6.81□□□□□ -1.32
PRPF40B-214ENST00000551320 SOD1P00441 154 aa6.81□□□□□ -1.32
PRPF40B-214ENST00000551320 CPP00450 1065 aa6.81□□□□□ -1.32
PRPF40B-214ENST00000551320 SLC4A1P02730 911 aa6.81□□□□□ -1.32
PRPF40B-214ENST00000551320 CALB1P05937 261 aa6.81□□□□□ -1.32
PRPF40B-214ENST00000551320 PIRTP0C851 137 aa6.81□□□□□ -1.32
PRPF40B-214ENST00000551320 ZNF28P17035 718 aa6.81□□□□□ -1.32
PRPF40B-214ENST00000551320 F8A1P23610 371 aa6.81□□□□□ -1.32
PRPF40B-214ENST00000551320 SERPINA4P29622 427 aa6.81□□□□□ -1.32
PRPF40B-214ENST00000551320 UGT1A3P35503 534 aa6.81□□□□□ -1.32
PRPF40B-214ENST00000551320 TRIM23P36406 574 aa6.81□□□□□ -1.32
PRPF40B-214ENST00000551320 ACTR1BP42025 376 aa6.81□□□□□ -1.32
PRPF40B-214ENST00000551320 CSRP3P50461 194 aa6.81□□□□□ -1.32
PRPF40B-214ENST00000551320 YBEYP58557 167 aaPredicted RBP6.81□□□□□ -1.32
PRPF40B-214ENST00000551320 ACTR1AP61163 376 aa6.81□□□□□ -1.32
PRPF40B-214ENST00000551320 CDK3Q00526 305 aa6.81□□□□□ -1.32
PRPF40B-214ENST00000551320 DSC2Q02487 901 aa6.81□□□□□ -1.32
PRPF40B-214ENST00000551320 BIRC2Q13490 618 aa6.81□□□□□ -1.32
PRPF40B-214ENST00000551320 DPYSQ14117 519 aa6.81□□□□□ -1.32
PRPF40B-214ENST00000551320 DEFB109BQ30KR1 87 aa6.81□□□□□ -1.32
PRPF40B-214ENST00000551320 PLA2G4EQ3MJ16 856 aa6.81□□□□□ -1.32
PRPF40B-214ENST00000551320 ATP13A4Q4VNC1 1196 aa6.81□□□□□ -1.32
PRPF40B-214ENST00000551320 FKBP15Q5T1M5 1219 aa6.81□□□□□ -1.32
PRPF40B-214ENST00000551320 ERMARDQ5T6L9 678 aa6.81□□□□□ -1.32
PRPF40B-214ENST00000551320 BRAT1Q6PJG6 821 aa6.81□□□□□ -1.32
PRPF40B-214ENST00000551320 LVRNQ6Q4G3 990 aa6.81□□□□□ -1.32
PRPF40B-214ENST00000551320 DNAJC14Q6Y2X3 702 aaPredicted RBP6.81□□□□□ -1.32
PRPF40B-214ENST00000551320 MICALCLQ6ZW33 695 aa6.81□□□□□ -1.32
PRPF40B-214ENST00000551320 ZNF571Q7Z3V5 609 aaPredicted RBP6.81□□□□□ -1.32
PRPF40B-214ENST00000551320 KDELC2Q7Z4H8 507 aa6.81□□□□□ -1.32
PRPF40B-214ENST00000551320 IRF2BP2Q7Z5L9 587 aa6.81□□□□□ -1.32
PRPF40B-214ENST00000551320 AOPEPQ8N6M6 819 aa6.81□□□□□ -1.32
PRPF40B-214ENST00000551320 IL22RA1Q8N6P7 574 aa6.81□□□□□ -1.32
PRPF40B-214ENST00000551320 GPBAR1Q8TDU6 330 aa6.81□□□□□ -1.32
PRPF40B-214ENST00000551320 SLC37A2Q8TED4 501 aa6.81□□□□□ -1.32
PRPF40B-214ENST00000551320 ZNF641Q96N77 438 aaPredicted RBP6.81□□□□□ -1.32
PRPF40B-214ENST00000551320 CMKLR1Q99788 373 aa6.81□□□□□ -1.32
PRPF40B-214ENST00000551320 SYT11Q9BT88 431 aa6.81□□□□□ -1.32
PRPF40B-214ENST00000551320 TBC1D10AQ9BXI6 508 aa6.81□□□□□ -1.32
PRPF40B-214ENST00000551320 RBCK1Q9BYM8 510 aa6.81□□□□□ -1.32
PRPF40B-214ENST00000551320 FRMD8Q9BZ67 464 aaPredicted RBP6.81□□□□□ -1.32
PRPF40B-214ENST00000551320 CATSPERBQ9H7T0 1116 aa6.81□□□□□ -1.32
PRPF40B-214ENST00000551320 NT5MQ9NPB1 228 aa6.81□□□□□ -1.32
PRPF40B-214ENST00000551320 LMBRD1Q9NUN5 540 aa6.81□□□□□ -1.32
PRPF40B-214ENST00000551320 SLC39A1Q9NY26 324 aa6.81□□□□□ -1.32
PRPF40B-214ENST00000551320 APPL1Q9UKG1 709 aa6.81□□□□□ -1.32
PRPF40B-214ENST00000551320 KCNK6Q9Y257 313 aa6.81□□□□□ -1.32
PRPF40B-214ENST00000551320 TTLL3Q9Y4R7 772 aa6.81□□□□□ -1.32
PRPF40B-214ENST00000551320 RP1L1Q8IWN7 2480 aaPredicted RBP6.81□□□□□ -1.32
PRPF40B-214ENST00000551320 TMEM191CA6NGB0 347 aa6.8□□□□□ -1.32
PRPF40B-214ENST00000551320 A6NHS1 94 aa6.8□□□□□ -1.32
PRPF40B-214ENST00000551320 LRRC53A6NM62 1247 aa6.8□□□□□ -1.32
PRPF40B-214ENST00000551320 DDX3XO00571 662 aaKnown RBP eCLIP6.8□□□□□ -1.32
PRPF40B-214ENST00000551320 FGF10O15520 208 aaPredicted RBP6.8□□□□□ -1.32
PRPF40B-214ENST00000551320 NUDT21O43809 227 aaKnown RBP6.8□□□□□ -1.32
PRPF40B-214ENST00000551320 LRCH4O75427 683 aa6.8□□□□□ -1.32
PRPF40B-214ENST00000551320 CPNE6O95741 557 aa6.8□□□□□ -1.32
PRPF40B-214ENST00000551320 FTLP02792 175 aaPredicted RBP6.8□□□□□ -1.32
PRPF40B-214ENST00000551320 FURINP09958 794 aa6.8□□□□□ -1.32
PRPF40B-214ENST00000551320 MYCLP1P12525 358 aaPredicted RBP6.8□□□□□ -1.32
PRPF40B-214ENST00000551320 TYRP1P17643 537 aa6.8□□□□□ -1.32
PRPF40B-214ENST00000551320 OAS2P29728 719 aaKnown RBP6.8□□□□□ -1.32
PRPF40B-214ENST00000551320 VIPR1P32241 457 aa6.8□□□□□ -1.32
PRPF40B-214ENST00000551320 GPR1P46091 355 aa6.8□□□□□ -1.32
PRPF40B-214ENST00000551320 NDST2P52849 883 aa6.8□□□□□ -1.32
PRPF40B-214ENST00000551320 MLLT10P55197 1068 aa6.8□□□□□ -1.32
PRPF40B-214ENST00000551320 GFERP55789 205 aa6.8□□□□□ -1.32
PRPF40B-214ENST00000551320 POLE2P56282 527 aa6.8□□□□□ -1.32
PRPF40B-214ENST00000551320 ITKQ08881 620 aa6.8□□□□□ -1.32
PRPF40B-214ENST00000551320 ZNF235Q14590 738 aa6.8□□□□□ -1.32
PRPF40B-214ENST00000551320 NCAPHQ15003 741 aa6.8□□□□□ -1.32
PRPF40B-214ENST00000551320 FAM69BQ5VUD6 431 aa6.8□□□□□ -1.32
PRPF40B-214ENST00000551320 LRRC66Q68CR7 880 aa6.8□□□□□ -1.32
PRPF40B-214ENST00000551320 TRIM72Q6ZMU5 477 aa6.8□□□□□ -1.32
PRPF40B-214ENST00000551320 ATG14Q6ZNE5 492 aa6.8□□□□□ -1.32
PRPF40B-214ENST00000551320 CHST15Q7LFX5 561 aaPredicted RBP6.8□□□□□ -1.32
PRPF40B-214ENST00000551320 ZNF438Q7Z4V0 828 aa6.8□□□□□ -1.32
PRPF40B-214ENST00000551320 CACNA2D3Q8IZS8 1091 aa6.8□□□□□ -1.32
PRPF40B-214ENST00000551320 ENOX1Q8TC92 643 aaKnown RBP6.8□□□□□ -1.32
PRPF40B-214ENST00000551320 NCSTNQ92542 709 aa6.8□□□□□ -1.32
PRPF40B-214ENST00000551320 DTD2Q96FN9 168 aa6.8□□□□□ -1.32
PRPF40B-214ENST00000551320 TBATAQ96M53 351 aa6.8□□□□□ -1.32
PRPF40B-214ENST00000551320 CITED4Q96RK1 184 aa6.8□□□□□ -1.32
PRPF40B-214ENST00000551320 RUFY1Q96T51 708 aa6.8□□□□□ -1.32
PRPF40B-214ENST00000551320 RIOK2Q9BVS4 552 aaKnown RBP6.8□□□□□ -1.32
PRPF40B-214ENST00000551320 TEX101Q9BY14 249 aa6.8□□□□□ -1.32
PRPF40B-214ENST00000551320 CEP41Q9BYV8 373 aa6.8□□□□□ -1.32
PRPF40B-214ENST00000551320 HAUS4Q9H6D7 363 aa6.8□□□□□ -1.32
PRPF40B-214ENST00000551320 KCNK4Q9NYG8 393 aa6.8□□□□□ -1.32
PRPF40B-214ENST00000551320 TRIM10Q9UDY6 481 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms