RNA–Protein interactions for RNA: ENST00000550987.5

CPSF6-206, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-206ENST00000550987 EP300Q09472 2414 aaPredicted RBP5.46□□□□□ -1.54
CPSF6-206ENST00000550987 ZNF831Q5JPB2 1677 aa5.45□□□□□ -1.54
CPSF6-206ENST00000550987 C17orf102A2RUQ5 167 aa5.45□□□□□ -1.54
CPSF6-206ENST00000550987 GRID2IPA4D2P6 1211 aa5.45□□□□□ -1.54
CPSF6-206ENST00000550987 A8MZ25 164 aa5.45□□□□□ -1.54
CPSF6-206ENST00000550987 NPIPB11E5RHQ5 1161 aa5.45□□□□□ -1.54
CPSF6-206ENST00000550987 IFNL4K9M1U5 179 aa5.45□□□□□ -1.54
CPSF6-206ENST00000550987 NARSO43776 548 aaKnown RBP5.45□□□□□ -1.54
CPSF6-206ENST00000550987 GPC4O75487 556 aa5.45□□□□□ -1.54
CPSF6-206ENST00000550987 HOXB5P09067 269 aa5.45□□□□□ -1.54
CPSF6-206ENST00000550987 TFPIP10646 304 aa5.45□□□□□ -1.54
CPSF6-206ENST00000550987 SELLP14151 372 aa5.45□□□□□ -1.54
CPSF6-206ENST00000550987 WT1P19544 449 aaPredicted RBP5.45□□□□□ -1.54
CPSF6-206ENST00000550987 ITGAXP20702 1163 aa5.45□□□□□ -1.54
CPSF6-206ENST00000550987 BMP5P22003 454 aa5.45□□□□□ -1.54
CPSF6-206ENST00000550987 EEF1DP29692 281 aaKnown RBP5.45□□□□□ -1.54
CPSF6-206ENST00000550987 SLC16A2P36021 539 aa5.45□□□□□ -1.54
CPSF6-206ENST00000550987 CAPZA2P47755 286 aa5.45□□□□□ -1.54
CPSF6-206ENST00000550987 GPR12P47775 334 aa5.45□□□□□ -1.54
CPSF6-206ENST00000550987 STAT2P52630 851 aa5.45□□□□□ -1.54
CPSF6-206ENST00000550987 PRMT2P55345 433 aa5.45□□□□□ -1.54
CPSF6-206ENST00000550987 CLDN2P57739 230 aa5.45□□□□□ -1.54
CPSF6-206ENST00000550987 HSF1Q00613 529 aa5.45□□□□□ -1.54
CPSF6-206ENST00000550987 SLC18A2Q05940 514 aa5.45□□□□□ -1.54
CPSF6-206ENST00000550987 ZNF268Q14587 947 aaPredicted RBP5.45□□□□□ -1.54
CPSF6-206ENST00000550987 TCTN1Q2MV58 587 aa5.45□□□□□ -1.54
CPSF6-206ENST00000550987 ALG11Q2TAA5 492 aa5.45□□□□□ -1.54
CPSF6-206ENST00000550987 CCDC184Q52MB2 194 aa5.45□□□□□ -1.54
CPSF6-206ENST00000550987 C1orf141Q5JVX7 400 aa5.45□□□□□ -1.54
CPSF6-206ENST00000550987 TBC1D9BQ66K14 1250 aa5.45□□□□□ -1.54
CPSF6-206ENST00000550987 LRRC8EQ6NSJ5 796 aa5.45□□□□□ -1.54
CPSF6-206ENST00000550987 OLFM4Q6UX06 510 aa5.45□□□□□ -1.54
CPSF6-206ENST00000550987 BCAS4Q8TDM0 211 aa5.45□□□□□ -1.54
CPSF6-206ENST00000550987 PRPF31Q8WWY3 499 aaKnown RBP5.45□□□□□ -1.54
CPSF6-206ENST00000550987 MOAP1Q96BY2 351 aa5.45□□□□□ -1.54
CPSF6-206ENST00000550987 RNF183Q96D59 192 aa5.45□□□□□ -1.54
CPSF6-206ENST00000550987 ARHGEF26Q96DR7 871 aa5.45□□□□□ -1.54
CPSF6-206ENST00000550987 GCNAQ96QF7 691 aa5.45□□□□□ -1.54
CPSF6-206ENST00000550987 PRAM1Q96QH2 718 aa5.45□□□□□ -1.54
CPSF6-206ENST00000550987 SRSF8Q9BRL6 282 aaKnown RBP5.45□□□□□ -1.54
CPSF6-206ENST00000550987 NDST4Q9H3R1 872 aa5.45□□□□□ -1.54
CPSF6-206ENST00000550987 WDR6Q9NNW5 1121 aaKnown RBP5.45□□□□□ -1.54
CPSF6-206ENST00000550987 MLXIPLQ9NP71 852 aa5.45□□□□□ -1.54
CPSF6-206ENST00000550987 PACSIN3Q9UKS6 424 aa5.45□□□□□ -1.54
CPSF6-206ENST00000550987 CHD7Q9P2D1 2997 aa5.45□□□□□ -1.54
CPSF6-206ENST00000550987 TAF1P21675 1872 aa5.45□□□□□ -1.54
CPSF6-206ENST00000550987 CDHR2Q9BYE9 1310 aa5.45□□□□□ -1.54
CPSF6-206ENST00000550987 MYO9BQ13459 2157 aa5.45□□□□□ -1.54
CPSF6-206ENST00000550987 NFAT5O94916 1531 aa5.44□□□□□ -1.54
CPSF6-206ENST00000550987 DSPP15924 2871 aaKnown RBP5.44□□□□□ -1.54
CPSF6-206ENST00000550987 hCG_1809904A0A1W2PP81 198 aa5.44□□□□□ -1.54
CPSF6-206ENST00000550987 A0A1W2PPE2 198 aa5.44□□□□□ -1.54
CPSF6-206ENST00000550987 A0A1W2PR64 198 aa5.44□□□□□ -1.54
CPSF6-206ENST00000550987 MANSC4A6NHS7 340 aaPredicted RBP5.44□□□□□ -1.54
CPSF6-206ENST00000550987 KLRF2D3W0D1 207 aa5.44□□□□□ -1.54
CPSF6-206ENST00000550987 MASP2O00187 686 aa5.44□□□□□ -1.54
CPSF6-206ENST00000550987 TP73O15350 636 aa5.44□□□□□ -1.54
CPSF6-206ENST00000550987 ADAM20O43506 726 aa5.44□□□□□ -1.54
CPSF6-206ENST00000550987 NEURL1O76050 574 aa5.44□□□□□ -1.54
CPSF6-206ENST00000550987 TPPPO94811 219 aa5.44□□□□□ -1.54
CPSF6-206ENST00000550987 HSPA4LO95757 839 aa5.44□□□□□ -1.54
CPSF6-206ENST00000550987 AFPP02771 609 aaKnown RBP5.44□□□□□ -1.54
CPSF6-206ENST00000550987 SERPINB2P05120 415 aa5.44□□□□□ -1.54
CPSF6-206ENST00000550987 SRPRAP08240 638 aaKnown RBP5.44□□□□□ -1.54
CPSF6-206ENST00000550987 INSRRP14616 1297 aa5.44□□□□□ -1.54
CPSF6-206ENST00000550987 CENPAP49450 140 aa5.44□□□□□ -1.54
CPSF6-206ENST00000550987 LIG4P49917 911 aa5.44□□□□□ -1.54
CPSF6-206ENST00000550987 SORDQ00796 357 aa5.44□□□□□ -1.54
CPSF6-206ENST00000550987 TFAP4Q01664 338 aa5.44□□□□□ -1.54
CPSF6-206ENST00000550987 ROR1Q01973 937 aa5.44□□□□□ -1.54
CPSF6-206ENST00000550987 EFEMP1Q12805 493 aa5.44□□□□□ -1.54
CPSF6-206ENST00000550987 TNFAIP1Q13829 316 aa5.44□□□□□ -1.54
CPSF6-206ENST00000550987 PGM5Q15124 567 aa5.44□□□□□ -1.54
CPSF6-206ENST00000550987 FNDC1Q4ZHG4 1894 aaPredicted RBP5.44□□□□□ -1.54
CPSF6-206ENST00000550987 IGSF11Q5DX21 431 aa5.44□□□□□ -1.54
CPSF6-206ENST00000550987 EARS2Q5JPH6 523 aaKnown RBP5.44□□□□□ -1.54
CPSF6-206ENST00000550987 TTC39AQ5SRH9 613 aa5.44□□□□□ -1.54
CPSF6-206ENST00000550987 NCAPH2Q6IBW4 605 aa5.44□□□□□ -1.54
CPSF6-206ENST00000550987 KDELC2Q7Z4H8 507 aa5.44□□□□□ -1.54
CPSF6-206ENST00000550987 CCDC13Q8IYE1 715 aa5.44□□□□□ -1.54
CPSF6-206ENST00000550987 POGLUT1Q8NBL1 392 aa5.44□□□□□ -1.54
CPSF6-206ENST00000550987 MCUQ8NE86 351 aa5.44□□□□□ -1.54
CPSF6-206ENST00000550987 GJC3Q8NFK1 279 aa5.44□□□□□ -1.54
CPSF6-206ENST00000550987 OR4N2Q8NGD1 307 aa5.44□□□□□ -1.54
CPSF6-206ENST00000550987 NELL1Q92832 810 aa5.44□□□□□ -1.54
CPSF6-206ENST00000550987 OTULINQ96BN8 352 aa5.44□□□□□ -1.54
CPSF6-206ENST00000550987 ZNF653Q96CK0 615 aa5.44□□□□□ -1.54
CPSF6-206ENST00000550987 HARBI1Q96MB7 349 aa5.44□□□□□ -1.54
CPSF6-206ENST00000550987 TTC14Q96N46 770 aa5.44□□□□□ -1.54
CPSF6-206ENST00000550987 MXRA8Q9BRK3 442 aa5.44□□□□□ -1.54
CPSF6-206ENST00000550987 SCNM1Q9BWG6 230 aa5.44□□□□□ -1.54
CPSF6-206ENST00000550987 KLK15Q9H2R5 256 aa5.44□□□□□ -1.54
CPSF6-206ENST00000550987 OSGEPL1Q9H4B0 414 aa5.44□□□□□ -1.54
CPSF6-206ENST00000550987 PLK3Q9H4B4 646 aa5.44□□□□□ -1.54
CPSF6-206ENST00000550987 PLEKHA4Q9H4M7 779 aa5.44□□□□□ -1.54
CPSF6-206ENST00000550987 C11orf49Q9H6J7 331 aa5.44□□□□□ -1.54
CPSF6-206ENST00000550987 AAMDCQ9H7C9 122 aa5.44□□□□□ -1.54
CPSF6-206ENST00000550987 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP5.44□□□□□ -1.54
CPSF6-206ENST00000550987 PAPOLBQ9NRJ5 636 aaKnown RBP5.44□□□□□ -1.54
CPSF6-206ENST00000550987 PLXNA1Q9UIW2 1896 aa5.44□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms