RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 ADAM8P78325 824 aa5.85□□□□□ -1.47
SCAF11-213ENST00000550629 ZNF33AQ06730 810 aa5.85□□□□□ -1.47
SCAF11-213ENST00000550629 ZNF177Q13360 481 aaPredicted RBP5.85□□□□□ -1.47
SCAF11-213ENST00000550629 CDH18Q13634 790 aa5.85□□□□□ -1.47
SCAF11-213ENST00000550629 TUBB2AQ13885 445 aa5.85□□□□□ -1.47
SCAF11-213ENST00000550629 PAFAH1B3Q15102 231 aaKnown RBP5.85□□□□□ -1.47
SCAF11-213ENST00000550629 CA9Q16790 459 aa5.85□□□□□ -1.47
SCAF11-213ENST00000550629 PARP15Q460N3 678 aa5.85□□□□□ -1.47
SCAF11-213ENST00000550629 ANKRD20A8PQ5CZ79 823 aa5.85□□□□□ -1.47
SCAF11-213ENST00000550629 PAPD7Q5XG87 772 aaKnown RBP5.85□□□□□ -1.47
SCAF11-213ENST00000550629 AFMIDQ63HM1 303 aa5.85□□□□□ -1.47
SCAF11-213ENST00000550629 SLC9A4Q6AI14 798 aa5.85□□□□□ -1.47
SCAF11-213ENST00000550629 RWDD4Q6NW29 188 aaKnown RBP5.85□□□□□ -1.47
SCAF11-213ENST00000550629 RFWD3Q6PCD5 774 aa5.85□□□□□ -1.47
SCAF11-213ENST00000550629 TMCO3Q6UWJ1 677 aa5.85□□□□□ -1.47
SCAF11-213ENST00000550629 BBS12Q6ZW61 710 aa5.85□□□□□ -1.47
SCAF11-213ENST00000550629 BZW1Q7L1Q6 419 aaKnown RBP5.85□□□□□ -1.47
SCAF11-213ENST00000550629 C14orf80Q86SX3 495 aa5.85□□□□□ -1.47
SCAF11-213ENST00000550629 NLRP14Q86W24 1093 aa5.85□□□□□ -1.47
SCAF11-213ENST00000550629 RALGPS2Q86X27 583 aaPredicted RBP5.85□□□□□ -1.47
SCAF11-213ENST00000550629 PYROXD2Q8N2H3 581 aa5.85□□□□□ -1.47
SCAF11-213ENST00000550629 DDX51Q8N8A6 666 aaKnown RBP eCLIP5.85□□□□□ -1.47
SCAF11-213ENST00000550629 ANKRD53Q8N9V6 530 aa5.85□□□□□ -1.47
SCAF11-213ENST00000550629 CCDC26Q8TAB7 109 aa5.85□□□□□ -1.47
SCAF11-213ENST00000550629 FIBINQ8TAL6 211 aa5.85□□□□□ -1.47
SCAF11-213ENST00000550629 RSAD2Q8WXG1 361 aa5.85□□□□□ -1.47
SCAF11-213ENST00000550629 RAPGEF5Q92565 580 aa5.85□□□□□ -1.47
SCAF11-213ENST00000550629 FATE1Q969F0 183 aa5.85□□□□□ -1.47
SCAF11-213ENST00000550629 IGSF8Q969P0 613 aa5.85□□□□□ -1.47
SCAF11-213ENST00000550629 PBKQ96KB5 322 aa5.85□□□□□ -1.47
SCAF11-213ENST00000550629 RPL10LQ96L21 214 aaKnown RBP5.85□□□□□ -1.47
SCAF11-213ENST00000550629 RNF157Q96PX1 679 aa5.85□□□□□ -1.47
SCAF11-213ENST00000550629 XPO6Q96QU8 1125 aaKnown RBP5.85□□□□□ -1.47
SCAF11-213ENST00000550629 WDR24Q96S15 920 aa5.85□□□□□ -1.47
SCAF11-213ENST00000550629 NAP1L3Q99457 506 aaPredicted RBP5.85□□□□□ -1.47
SCAF11-213ENST00000550629 NAPGQ99747 312 aaPredicted RBP5.85□□□□□ -1.47
SCAF11-213ENST00000550629 RPP25Q9BUL9 199 aaKnown RBP5.85□□□□□ -1.47
SCAF11-213ENST00000550629 TUBB2BQ9BVA1 445 aa5.85□□□□□ -1.47
SCAF11-213ENST00000550629 MAK16Q9BXY0 300 aaKnown RBP5.85□□□□□ -1.47
SCAF11-213ENST00000550629 FRMD8P1Q9BZ68 369 aaPredicted RBP5.85□□□□□ -1.47
SCAF11-213ENST00000550629 BRD8Q9H0E9 1235 aa5.85□□□□□ -1.47
SCAF11-213ENST00000550629 PCED1AQ9H1Q7 454 aa5.85□□□□□ -1.47
SCAF11-213ENST00000550629 MAGEH1Q9H213 219 aa5.85□□□□□ -1.47
SCAF11-213ENST00000550629 MTG2Q9H4K7 406 aa5.85□□□□□ -1.47
SCAF11-213ENST00000550629 EBF3Q9H4W6 596 aa5.85□□□□□ -1.47
SCAF11-213ENST00000550629 HPS4Q9NQG7 708 aa5.85□□□□□ -1.47
SCAF11-213ENST00000550629 GPATCH2LQ9NWQ4 482 aa5.85□□□□□ -1.47
SCAF11-213ENST00000550629 RNF14Q9UBS8 474 aa5.85□□□□□ -1.47
SCAF11-213ENST00000550629 WNT16Q9UBV4 365 aa5.85□□□□□ -1.47
SCAF11-213ENST00000550629 SNX12Q9UMY4 172 aa5.85□□□□□ -1.47
SCAF11-213ENST00000550629 DUSP12Q9UNI6 340 aa5.85□□□□□ -1.47
SCAF11-213ENST00000550629 HS3ST3A1Q9Y663 406 aa5.85□□□□□ -1.47
SCAF11-213ENST00000550629 DOCK8Q8NF50 2099 aa5.84□□□□□ -1.47
SCAF11-213ENST00000550629 C5orf42Q9H799 3197 aa5.84□□□□□ -1.47
SCAF11-213ENST00000550629 hCG_1818297A0A087WSY0 165 aa5.84□□□□□ -1.47
SCAF11-213ENST00000550629 A0A1W2PRX2 142 aa5.84□□□□□ -1.47
SCAF11-213ENST00000550629 NEDD8-MDP1E9PL57 170 aa5.84□□□□□ -1.47
SCAF11-213ENST00000550629 PI4K2BG5E9Z4 385 aa5.84□□□□□ -1.47
SCAF11-213ENST00000550629 H0Y626 953 aa5.84□□□□□ -1.47
SCAF11-213ENST00000550629 APOL1O14791 398 aa5.84□□□□□ -1.47
SCAF11-213ENST00000550629 DCLK1O15075 740 aa5.84□□□□□ -1.47
SCAF11-213ENST00000550629 NPC1O15118 1278 aa5.84□□□□□ -1.47
SCAF11-213ENST00000550629 ZNF500O60304 480 aaPredicted RBP5.84□□□□□ -1.47
SCAF11-213ENST00000550629 TSPAN3O60637 253 aa5.84□□□□□ -1.47
SCAF11-213ENST00000550629 OPHN1O60890 802 aa5.84□□□□□ -1.47
SCAF11-213ENST00000550629 RAMP2O60895 175 aa5.84□□□□□ -1.47
SCAF11-213ENST00000550629 TBL1XO60907 577 aa5.84□□□□□ -1.47
SCAF11-213ENST00000550629 TULP3O75386 442 aa5.84□□□□□ -1.47
SCAF11-213ENST00000550629 ATP1A1P05023 1023 aaKnown RBP5.84□□□□□ -1.47
SCAF11-213ENST00000550629 CD48P09326 243 aa5.84□□□□□ -1.47
SCAF11-213ENST00000550629 TNNT1P13805 278 aa5.84□□□□□ -1.47
SCAF11-213ENST00000550629 ERCC2P18074 760 aa5.84□□□□□ -1.47
SCAF11-213ENST00000550629 TGM2P21980 687 aa5.84□□□□□ -1.47
SCAF11-213ENST00000550629 OR1E1P30953 314 aa5.84□□□□□ -1.47
SCAF11-213ENST00000550629 CASQ1P31415 396 aa5.84□□□□□ -1.47
SCAF11-213ENST00000550629 GJC1P36383 396 aa5.84□□□□□ -1.47
SCAF11-213ENST00000550629 VCPP55072 806 aaKnown RBP5.84□□□□□ -1.47
SCAF11-213ENST00000550629 GEMIN4P57678 1058 aaKnown RBP5.84□□□□□ -1.47
SCAF11-213ENST00000550629 GNA12Q03113 381 aa5.84□□□□□ -1.47
SCAF11-213ENST00000550629 SULT2A1Q06520 285 aa5.84□□□□□ -1.47
SCAF11-213ENST00000550629 ANO4Q32M45 955 aa5.84□□□□□ -1.47
SCAF11-213ENST00000550629 ATP13A4Q4VNC1 1196 aa5.84□□□□□ -1.47
SCAF11-213ENST00000550629 USP39Q53GS9 565 aaKnown RBP5.84□□□□□ -1.47
SCAF11-213ENST00000550629 ALFQ53S48 1182 aa5.84□□□□□ -1.47
SCAF11-213ENST00000550629 SEL1L2Q5TEA6 688 aa5.84□□□□□ -1.47
SCAF11-213ENST00000550629 DCAF12L1Q5VU92 463 aa5.84□□□□□ -1.47
SCAF11-213ENST00000550629 CXorf57Q6NSI4 855 aaKnown RBP5.84□□□□□ -1.47
SCAF11-213ENST00000550629 MFSD7Q6UXD7 560 aa5.84□□□□□ -1.47
SCAF11-213ENST00000550629 TPGS1Q6ZTW0 290 aa5.84□□□□□ -1.47
SCAF11-213ENST00000550629 CLEC14AQ86T13 490 aa5.84□□□□□ -1.47
SCAF11-213ENST00000550629 CCDC50Q8IVM0 306 aa5.84□□□□□ -1.47
SCAF11-213ENST00000550629 MFN1Q8IWA4 741 aa5.84□□□□□ -1.47
SCAF11-213ENST00000550629 CFAP52Q8N1V2 620 aa5.84□□□□□ -1.47
SCAF11-213ENST00000550629 C17orf53Q8N3J3 647 aaPredicted RBP5.84□□□□□ -1.47
SCAF11-213ENST00000550629 RASGEF1CQ8N431 466 aa5.84□□□□□ -1.47
SCAF11-213ENST00000550629 PQLC3Q8N755 202 aa5.84□□□□□ -1.47
SCAF11-213ENST00000550629 PLD5Q8N7P1 536 aa5.84□□□□□ -1.47
SCAF11-213ENST00000550629 KDM1BQ8NB78 822 aa5.84□□□□□ -1.47
SCAF11-213ENST00000550629 PLA2G15Q8NCC3 412 aa5.84□□□□□ -1.47
SCAF11-213ENST00000550629 ACTRT1Q8TDG2 376 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms