RNA–Protein interactions for RNA: ENST00000550442.5

LETMD1-223, Transcript of LETM1 domain containing 1, human

TSL 4

Gene LETMD1, Length 469 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LETMD1-223	ENST00000550442	PTAR1	Q7Z6K3	402 aa	Predicted RBP	11.77	□□□□□ -0.53
LETMD1-223	ENST00000550442	LSMEM2	Q8N112	164 aa		11.77	□□□□□ -0.53
LETMD1-223	ENST00000550442	PLCD3	Q8N3E9	789 aa		11.77	□□□□□ -0.53
LETMD1-223	ENST00000550442	PGBD5	Q8N414	524 aa		11.77	□□□□□ -0.53
LETMD1-223	ENST00000550442	CCNYL1	Q8N7R7	359 aa		11.77	□□□□□ -0.53
LETMD1-223	ENST00000550442	PCYOX1L	Q8NBM8	494 aa		11.77	□□□□□ -0.53
LETMD1-223	ENST00000550442	KCNJ9	Q92806	393 aa		11.77	□□□□□ -0.53
LETMD1-223	ENST00000550442	LENG8	Q96PV6	779 aa	Predicted RBP	11.77	□□□□□ -0.53
LETMD1-223	ENST00000550442	MYCBP	Q99417	103 aa	Predicted RBP	11.77	□□□□□ -0.53
LETMD1-223	ENST00000550442	ZNF184	Q99676	751 aa	Predicted RBP	11.77	□□□□□ -0.53
LETMD1-223	ENST00000550442	TDRD1	Q9BXT4	1180 aa	Known RBP	11.77	□□□□□ -0.53
LETMD1-223	ENST00000550442	CCSER2	Q9H7U1	834 aa		11.77	□□□□□ -0.53
LETMD1-223	ENST00000550442	RC3H2	Q9HBD1	1191 aa	Known RBP	11.77	□□□□□ -0.53
LETMD1-223	ENST00000550442	S100A14	Q9HCY8	104 aa		11.77	□□□□□ -0.53
LETMD1-223	ENST00000550442	ZDHHC7	Q9NXF8	308 aa		11.77	□□□□□ -0.53
LETMD1-223	ENST00000550442	SPG21	Q9NZD8	308 aa		11.77	□□□□□ -0.53
LETMD1-223	ENST00000550442	IL1RAPL1	Q9NZN1	696 aa		11.77	□□□□□ -0.53
LETMD1-223	ENST00000550442	APPL1	Q9UKG1	709 aa		11.77	□□□□□ -0.53
LETMD1-223	ENST00000550442	PKP3	Q9Y446	797 aa		11.77	□□□□□ -0.53
LETMD1-223	ENST00000550442	TRAF6	Q9Y4K3	522 aa		11.77	□□□□□ -0.53
LETMD1-223	ENST00000550442	GREB1	Q4ZG55	1949 aa		11.76	□□□□□ -0.53
LETMD1-223	ENST00000550442	CHD5	Q8TDI0	1954 aa		11.76	□□□□□ -0.53
LETMD1-223	ENST00000550442		A8MT66	165 aa		11.76	□□□□□ -0.53
LETMD1-223	ENST00000550442		H0YJX3	145 aa		11.76	□□□□□ -0.53
LETMD1-223	ENST00000550442	GOLGA8T	H3BQL2	631 aa		11.76	□□□□□ -0.53
LETMD1-223	ENST00000550442	EIF3F	O00303	357 aa	Predicted RBP	11.76	□□□□□ -0.53
LETMD1-223	ENST00000550442	PER2	O15055	1255 aa		11.76	□□□□□ -0.53
LETMD1-223	ENST00000550442	UBD	O15205	165 aa		11.76	□□□□□ -0.53
LETMD1-223	ENST00000550442	COCH	O43405	550 aa		11.76	□□□□□ -0.53
LETMD1-223	ENST00000550442	GOT2	P00505	430 aa	Known RBP	11.76	□□□□□ -0.53
LETMD1-223	ENST00000550442	ANPEP	P15144	967 aa		11.76	□□□□□ -0.53
LETMD1-223	ENST00000550442	CD1D	P15813	335 aa		11.76	□□□□□ -0.53
LETMD1-223	ENST00000550442	ZNF37A	P17032	561 aa	Predicted RBP	11.76	□□□□□ -0.53
LETMD1-223	ENST00000550442	HOXB6	P17509	224 aa	Known RBP	11.76	□□□□□ -0.53
LETMD1-223	ENST00000550442	DDX6	P26196	483 aa	Known RBP eCLIP	11.76	□□□□□ -0.53
LETMD1-223	ENST00000550442	CORO1A	P31146	461 aa	Known RBP	11.76	□□□□□ -0.53
LETMD1-223	ENST00000550442	CHRNA4	P43681	627 aa		11.76	□□□□□ -0.53
LETMD1-223	ENST00000550442	HSPA13	P48723	471 aa		11.76	□□□□□ -0.53
LETMD1-223	ENST00000550442	PLK1	P53350	603 aa		11.76	□□□□□ -0.53
LETMD1-223	ENST00000550442	STX1B	P61266	288 aa		11.76	□□□□□ -0.53
LETMD1-223	ENST00000550442	TBL3	Q12788	808 aa	Known RBP	11.76	□□□□□ -0.53
LETMD1-223	ENST00000550442	USP4	Q13107	963 aa		11.76	□□□□□ -0.53
LETMD1-223	ENST00000550442	SMU1	Q2TAY7	513 aa		11.76	□□□□□ -0.53
LETMD1-223	ENST00000550442	GPR33	Q49SQ1	333 aa		11.76	□□□□□ -0.53
LETMD1-223	ENST00000550442	SLC9B1	Q4ZJI4	515 aa		11.76	□□□□□ -0.53
LETMD1-223	ENST00000550442	ZNF678	Q5SXM1	525 aa		11.76	□□□□□ -0.53
LETMD1-223	ENST00000550442	SDHAF4	Q5VUM1	108 aa		11.76	□□□□□ -0.53
LETMD1-223	ENST00000550442	ZC3H14	Q6PJT7	736 aa	Known RBP	11.76	□□□□□ -0.53
LETMD1-223	ENST00000550442	BNC2	Q6ZN30	1099 aa	Predicted RBP	11.76	□□□□□ -0.53
LETMD1-223	ENST00000550442	RNF165	Q6ZSG1	346 aa		11.76	□□□□□ -0.53
LETMD1-223	ENST00000550442	GLT6D1	Q7Z4J2	308 aa		11.76	□□□□□ -0.53
LETMD1-223	ENST00000550442	SPATA19	Q7Z5L4	167 aa		11.76	□□□□□ -0.53
LETMD1-223	ENST00000550442	GALNT13	Q8IUC8	556 aa		11.76	□□□□□ -0.53
LETMD1-223	ENST00000550442	SLC39A11	Q8N1S5	342 aa		11.76	□□□□□ -0.53
LETMD1-223	ENST00000550442	PELI3	Q8N2H9	469 aa		11.76	□□□□□ -0.53
LETMD1-223	ENST00000550442	CBARP	Q8N350	705 aa	Predicted RBP	11.76	□□□□□ -0.53
LETMD1-223	ENST00000550442	DCAF4L2	Q8NA75	395 aa		11.76	□□□□□ -0.53
LETMD1-223	ENST00000550442	DTWD2	Q8NBA8	298 aa		11.76	□□□□□ -0.53
LETMD1-223	ENST00000550442	KLHL23	Q8NBE8	558 aa		11.76	□□□□□ -0.53
LETMD1-223	ENST00000550442	TXNDC5	Q8NBS9	432 aa	Known RBP	11.76	□□□□□ -0.53
LETMD1-223	ENST00000550442	ZNF689	Q96CS4	500 aa	Predicted RBP	11.76	□□□□□ -0.53
LETMD1-223	ENST00000550442	TBATA	Q96M53	351 aa		11.76	□□□□□ -0.53
LETMD1-223	ENST00000550442	KLHL5	Q96PQ7	755 aa		11.76	□□□□□ -0.53
LETMD1-223	ENST00000550442	BTBD9	Q96Q07	612 aa		11.76	□□□□□ -0.53
LETMD1-223	ENST00000550442	HOPX	Q9BPY8	73 aa	Predicted RBP	11.76	□□□□□ -0.53
LETMD1-223	ENST00000550442	CLSTN3	Q9BQT9	956 aa		11.76	□□□□□ -0.53
LETMD1-223	ENST00000550442	MUC13	Q9H3R2	512 aa		11.76	□□□□□ -0.53
LETMD1-223	ENST00000550442	C8orf4	Q9NR00	106 aa		11.76	□□□□□ -0.53
LETMD1-223	ENST00000550442	MRPL17	Q9NRX2	175 aa	Known RBP	11.76	□□□□□ -0.53
LETMD1-223	ENST00000550442	SARDH	Q9UL12	918 aa		11.76	□□□□□ -0.53
LETMD1-223	ENST00000550442	ZNF711	Q9Y462	761 aa		11.76	□□□□□ -0.53
LETMD1-223	ENST00000550442	OAS3	Q9Y6K5	1087 aa	Known RBP	11.76	□□□□□ -0.53
LETMD1-223	ENST00000550442	SEC23IP	Q9Y6Y8	1000 aa	Known RBP	11.76	□□□□□ -0.53
LETMD1-223	ENST00000550442	PLXNA4	Q9HCM2	1894 aa		11.76	□□□□□ -0.53
LETMD1-223	ENST00000550442	NYNRIN	Q9P2P1	1898 aa	Known RBP	11.76	□□□□□ -0.53
LETMD1-223	ENST00000550442	ZNF638	Q14966	1978 aa	Known RBP	11.76	□□□□□ -0.53
LETMD1-223	ENST00000550442	USP24	Q9UPU5	2620 aa		11.75	□□□□□ -0.53
LETMD1-223	ENST00000550442	ZC3H11B	A0A1B0GUI2	810 aa	Predicted RBP	11.75	□□□□□ -0.53
LETMD1-223	ENST00000550442	CCDC162P	A2VCL2	907 aa		11.75	□□□□□ -0.53
LETMD1-223	ENST00000550442	C2orf71	A6NGG8	1288 aa		11.75	□□□□□ -0.53
LETMD1-223	ENST00000550442	IFRD1	O00458	451 aa	Predicted RBP	11.75	□□□□□ -0.53
LETMD1-223	ENST00000550442	GIPC1	O14908	333 aa		11.75	□□□□□ -0.53
LETMD1-223	ENST00000550442	CASQ2	O14958	399 aa	Predicted RBP	11.75	□□□□□ -0.53
LETMD1-223	ENST00000550442	STX7	O15400	261 aa	Known RBP	11.75	□□□□□ -0.53
LETMD1-223	ENST00000550442	KLK8	O60259	260 aa		11.75	□□□□□ -0.53
LETMD1-223	ENST00000550442	ITGAX	P20702	1163 aa		11.75	□□□□□ -0.53
LETMD1-223	ENST00000550442	ME2	P23368	584 aa		11.75	□□□□□ -0.53
LETMD1-223	ENST00000550442	RPS3	P23396	243 aa	Known RBP eCLIP	11.75	□□□□□ -0.53
LETMD1-223	ENST00000550442	ARRB2	P32121	409 aa		11.75	□□□□□ -0.53
LETMD1-223	ENST00000550442	HMGCL	P35914	325 aa		11.75	□□□□□ -0.53
LETMD1-223	ENST00000550442	ACVRL1	P37023	503 aa		11.75	□□□□□ -0.53
LETMD1-223	ENST00000550442	GLRB	P48167	497 aa		11.75	□□□□□ -0.53
LETMD1-223	ENST00000550442	CLNS1A	P54105	237 aa	Known RBP	11.75	□□□□□ -0.53
LETMD1-223	ENST00000550442	MAX	P61244	160 aa		11.75	□□□□□ -0.53
LETMD1-223	ENST00000550442	SLC7A9	P82251	487 aa		11.75	□□□□□ -0.53
LETMD1-223	ENST00000550442	CACNG1	Q06432	222 aa		11.75	□□□□□ -0.53
LETMD1-223	ENST00000550442	FOXM1	Q08050	763 aa		11.75	□□□□□ -0.53
LETMD1-223	ENST00000550442	BLMH	Q13867	455 aa		11.75	□□□□□ -0.53
LETMD1-223	ENST00000550442	MPPE1	Q53F39	396 aa		11.75	□□□□□ -0.53
LETMD1-223	ENST00000550442	ANKS6	Q68DC2	871 aa		11.75	□□□□□ -0.53

Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms