RNA–Protein interactions for RNA: ENST00000549686.5

LETMD1-220, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 563 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-220ENST00000549686 UGT1A7Q9HAW7 530 aa17.29■□□□□ 0.36
LETMD1-220ENST00000549686 UGT1A10Q9HAW8 530 aa17.29■□□□□ 0.36
LETMD1-220ENST00000549686 UGT1A8Q9HAW9 530 aa17.29■□□□□ 0.36
LETMD1-220ENST00000549686 SLC17A6Q9P2U8 582 aa17.29■□□□□ 0.36
LETMD1-220ENST00000549686 EBF1Q9UH73 591 aa17.29■□□□□ 0.36
LETMD1-220ENST00000549686 TBK1Q9UHD2 729 aa17.29■□□□□ 0.36
LETMD1-220ENST00000549686 ACTL7BQ9Y614 415 aa17.29■□□□□ 0.36
LETMD1-220ENST00000549686 COMMD10Q9Y6G5 202 aa17.29■□□□□ 0.36
LETMD1-220ENST00000549686 COL6A3P12111 3177 aa17.29■□□□□ 0.36
LETMD1-220ENST00000549686 MYLKQ15746 1914 aa17.29■□□□□ 0.36
LETMD1-220ENST00000549686 TBC1D3DA0A087WVF3 549 aa17.28■□□□□ 0.36
LETMD1-220ENST00000549686 TBC1D3IA0A087WXS9 549 aa17.28■□□□□ 0.36
LETMD1-220ENST00000549686 TBC1D3EA0A087X179 549 aa17.28■□□□□ 0.36
LETMD1-220ENST00000549686 TBC1D3KA0A087X1G2 549 aa17.28■□□□□ 0.36
LETMD1-220ENST00000549686 TBC1D3FA6NER0 549 aaPredicted RBP17.28■□□□□ 0.36
LETMD1-220ENST00000549686 IGLON5A6NGN9 336 aa17.28■□□□□ 0.36
LETMD1-220ENST00000549686 GOLGA8CPA6NN73 597 aa17.28■□□□□ 0.36
LETMD1-220ENST00000549686 TBC1D3LB9A6J9 549 aa17.28■□□□□ 0.36
LETMD1-220ENST00000549686 RNGTTO60942 597 aaKnown RBP17.28■□□□□ 0.36
LETMD1-220ENST00000549686 FAM155BO75949 473 aa17.28■□□□□ 0.36
LETMD1-220ENST00000549686 SYF2O95926 243 aaKnown RBP17.28■□□□□ 0.36
LETMD1-220ENST00000549686 TBC1D3HP0C7X1 549 aa17.28■□□□□ 0.36
LETMD1-220ENST00000549686 ZNF7P17097 686 aaPredicted RBP17.28■□□□□ 0.36
LETMD1-220ENST00000549686 AOC1P19801 751 aa17.28■□□□□ 0.36
LETMD1-220ENST00000549686 ACRV1P26436 265 aa17.28■□□□□ 0.36
LETMD1-220ENST00000549686 SMAD1Q15797 465 aaKnown RBP17.28■□□□□ 0.36
LETMD1-220ENST00000549686 TMEM259Q4ZIN3 620 aa17.28■□□□□ 0.36
LETMD1-220ENST00000549686 CWF19L1Q69YN2 538 aaKnown RBP17.28■□□□□ 0.36
LETMD1-220ENST00000549686 TBC1D3GQ6DHY5 549 aa17.28■□□□□ 0.36
LETMD1-220ENST00000549686 TBC1D3CQ6IPX1 549 aa17.28■□□□□ 0.36
LETMD1-220ENST00000549686 PSAPL1Q6NUJ1 521 aa17.28■□□□□ 0.36
LETMD1-220ENST00000549686 SERPINA9Q86WD7 417 aa17.28■□□□□ 0.36
LETMD1-220ENST00000549686 TRIM69Q86WT6 500 aa17.28■□□□□ 0.36
LETMD1-220ENST00000549686 PIANPQ8IYJ0 282 aa17.28■□□□□ 0.36
LETMD1-220ENST00000549686 TBC1D3Q8IZP1 549 aaPredicted RBP17.28■□□□□ 0.36
LETMD1-220ENST00000549686 RBFAQ8N0V3 343 aa17.28■□□□□ 0.36
LETMD1-220ENST00000549686 NXPE1Q8N323 547 aa17.28■□□□□ 0.36
LETMD1-220ENST00000549686 HHIPQ96QV1 700 aa17.28■□□□□ 0.36
LETMD1-220ENST00000549686 GPR22Q99680 433 aa17.28■□□□□ 0.36
LETMD1-220ENST00000549686 FBXO6Q9NRD1 293 aaPredicted RBP17.28■□□□□ 0.36
LETMD1-220ENST00000549686 CTNNAL1Q9UBT7 734 aa17.28■□□□□ 0.36
LETMD1-220ENST00000549686 CD84Q9UIB8 345 aa17.28■□□□□ 0.36
LETMD1-220ENST00000549686 PCDHB1Q9Y5F3 818 aa17.28■□□□□ 0.36
LETMD1-220ENST00000549686 A0A1W2PQU0 124 aa17.27■□□□□ 0.36
LETMD1-220ENST00000549686 TRIM49D1C9J1S8 452 aa17.27■□□□□ 0.36
LETMD1-220ENST00000549686 F8W8V4 182 aa17.27■□□□□ 0.36
LETMD1-220ENST00000549686 MT-ND3P03897 115 aa17.27■□□□□ 0.36
LETMD1-220ENST00000549686 DCNP07585 359 aaKnown RBP17.27■□□□□ 0.36
LETMD1-220ENST00000549686 RPS3P23396 243 aaKnown RBP eCLIP17.27■□□□□ 0.36
LETMD1-220ENST00000549686 GABRB3P28472 473 aa17.27■□□□□ 0.36
LETMD1-220ENST00000549686 HOXA6P31267 233 aa17.27■□□□□ 0.36
LETMD1-220ENST00000549686 NUDT1P36639 197 aa17.27■□□□□ 0.36
LETMD1-220ENST00000549686 SEMA3AQ14563 771 aa17.27■□□□□ 0.36
LETMD1-220ENST00000549686 ATP13A5Q4VNC0 1218 aa17.27■□□□□ 0.36
LETMD1-220ENST00000549686 LDLRAP1Q5SW96 308 aa17.27■□□□□ 0.36
LETMD1-220ENST00000549686 RFLNAQ6ZTI6 216 aa17.27■□□□□ 0.36
LETMD1-220ENST00000549686 ACMSDQ8TDX5 336 aa17.27■□□□□ 0.36
LETMD1-220ENST00000549686 LPGAT1Q92604 370 aa17.27■□□□□ 0.36
LETMD1-220ENST00000549686 SCAMP4Q969E2 229 aa17.27■□□□□ 0.36
LETMD1-220ENST00000549686 ISL2Q96A47 359 aa17.27■□□□□ 0.36
LETMD1-220ENST00000549686 TLCD1Q96CP7 247 aa17.27■□□□□ 0.36
LETMD1-220ENST00000549686 TSPAN17Q96FV3 270 aa17.27■□□□□ 0.36
LETMD1-220ENST00000549686 COPS8Q99627 209 aa17.27■□□□□ 0.36
LETMD1-220ENST00000549686 PCED1AQ9H1Q7 454 aa17.27■□□□□ 0.36
LETMD1-220ENST00000549686 CCDC68Q9H2F9 335 aa17.27■□□□□ 0.36
LETMD1-220ENST00000549686 ZDHHC3Q9NYG2 299 aa17.27■□□□□ 0.36
LETMD1-220ENST00000549686 DLGAP2Q9P1A6 1054 aa17.27■□□□□ 0.36
LETMD1-220ENST00000549686 CFAP99D6REC4 459 aa17.26■□□□□ 0.35
LETMD1-220ENST00000549686 H3BMM5 538 aa17.26■□□□□ 0.35
LETMD1-220ENST00000549686 PRMT5O14744 637 aaPredicted RBP17.26■□□□□ 0.35
LETMD1-220ENST00000549686 HAUS5O94927 633 aa17.26■□□□□ 0.35
LETMD1-220ENST00000549686 SEMA4FO95754 770 aa17.26■□□□□ 0.35
LETMD1-220ENST00000549686 ESR1P03372 595 aa17.26■□□□□ 0.35
LETMD1-220ENST00000549686 RALBP11234 206 aa17.26■□□□□ 0.35
LETMD1-220ENST00000549686 CD6P30203 668 aa17.26■□□□□ 0.35
LETMD1-220ENST00000549686 NSG1P42857 185 aa17.26■□□□□ 0.35
LETMD1-220ENST00000549686 SERPINB8P50452 374 aa17.26■□□□□ 0.35
LETMD1-220ENST00000549686 CCR5P51681 352 aa17.26■□□□□ 0.35
LETMD1-220ENST00000549686 POU4F1Q01851 419 aa17.26■□□□□ 0.35
LETMD1-220ENST00000549686 DBN1Q16643 649 aa17.26■□□□□ 0.35
LETMD1-220ENST00000549686 MROH9Q5TGP6 573 aa17.26■□□□□ 0.35
LETMD1-220ENST00000549686 FAM45BPQ6NSW5 357 aa17.26■□□□□ 0.35
LETMD1-220ENST00000549686 CCDC91Q7Z6B0 441 aa17.26■□□□□ 0.35
LETMD1-220ENST00000549686 LDB1Q86U70 411 aaPredicted RBP17.26■□□□□ 0.35
LETMD1-220ENST00000549686 TRABD2AQ86V40 505 aa17.26■□□□□ 0.35
LETMD1-220ENST00000549686 FAM124AQ86V42 546 aa17.26■□□□□ 0.35
LETMD1-220ENST00000549686 PHYKPLQ8IUZ5 450 aa17.26■□□□□ 0.35
LETMD1-220ENST00000549686 DENND6BQ8NEG7 585 aa17.26■□□□□ 0.35
LETMD1-220ENST00000549686 DDHD1Q8NEL9 900 aa17.26■□□□□ 0.35
LETMD1-220ENST00000549686 FAM45AQ8TCE6 357 aa17.26■□□□□ 0.35
LETMD1-220ENST00000549686 MZB1Q8WU39 189 aa17.26■□□□□ 0.35
LETMD1-220ENST00000549686 BTN2A2Q8WVV5 523 aa17.26■□□□□ 0.35
LETMD1-220ENST00000549686 GLYATL1Q969I3 302 aa17.26■□□□□ 0.35
LETMD1-220ENST00000549686 ARL8AQ96BM9 186 aa17.26■□□□□ 0.35
LETMD1-220ENST00000549686 ALKBH8Q96BT7 664 aaKnown RBP17.26■□□□□ 0.35
LETMD1-220ENST00000549686 SLC17A9Q9BYT1 436 aa17.26■□□□□ 0.35
LETMD1-220ENST00000549686 FAM96AQ9H5X1 160 aa17.26■□□□□ 0.35
LETMD1-220ENST00000549686 ZFR2Q9UPR6 939 aaKnown RBP17.26■□□□□ 0.35
LETMD1-220ENST00000549686 COQ6Q9Y2Z9 468 aa17.26■□□□□ 0.35
LETMD1-220ENST00000549686 IGLV3-16A0A075B6K0 115 aa17.25■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms