RNA–Protein interactions for RNA: ENST00000549396.5

PPFIA2-216, Transcript of PTPRF interacting protein alpha 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PPFIA2, Length 5,363 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-216ENST00000549396 CACNA2D2Q9NY47 1150 aa9.21□□□□□ -0.94
PPFIA2-216ENST00000549396 KLHL3Q9UH77 587 aa9.21□□□□□ -0.94
PPFIA2-216ENST00000549396 EVLQ9UI08 416 aaPredicted RBP9.21□□□□□ -0.94
PPFIA2-216ENST00000549396 PCDHGA11Q9Y5H2 935 aa9.21□□□□□ -0.94
PPFIA2-216ENST00000549396 SPTLC1O15269 473 aa9.2□□□□□ -0.94
PPFIA2-216ENST00000549396 MSI1O43347 362 aaKnown RBP9.2□□□□□ -0.94
PPFIA2-216ENST00000549396 CHRNA1P02708 482 aa9.2□□□□□ -0.94
PPFIA2-216ENST00000549396 FYNP06241 537 aa9.2□□□□□ -0.94
PPFIA2-216ENST00000549396 TRIM60Q495X7 471 aa9.2□□□□□ -0.94
PPFIA2-216ENST00000549396 SPPL2AQ8TCT8 520 aa9.2□□□□□ -0.94
PPFIA2-216ENST00000549396 METTL21AQ8WXB1 218 aa9.2□□□□□ -0.94
PPFIA2-216ENST00000549396 MSANTD3Q96H12 275 aa9.2□□□□□ -0.94
PPFIA2-216ENST00000549396 ART5Q96L15 291 aa9.2□□□□□ -0.94
PPFIA2-216ENST00000549396 TSGA13Q96PP4 275 aa9.2□□□□□ -0.94
PPFIA2-216ENST00000549396 OLFM1Q99784 485 aa9.2□□□□□ -0.94
PPFIA2-216ENST00000549396 EFCAB11Q9BUY7 163 aa9.2□□□□□ -0.94
PPFIA2-216ENST00000549396 ADAMTS10Q9H324 1103 aa9.2□□□□□ -0.94
PPFIA2-216ENST00000549396 TMEM245Q9H330 911 aa9.2□□□□□ -0.94
PPFIA2-216ENST00000549396 CCNB1IP1Q9NPC3 277 aa9.2□□□□□ -0.94
PPFIA2-216ENST00000549396 TDP1Q9NUW8 608 aa9.2□□□□□ -0.94
PPFIA2-216ENST00000549396 USE1Q9NZ43 259 aa9.2□□□□□ -0.94
PPFIA2-216ENST00000549396 XPR1Q9UBH6 696 aa9.2□□□□□ -0.94
PPFIA2-216ENST00000549396 NRAPQ86VF7 1730 aa9.2□□□□□ -0.94
PPFIA2-216ENST00000549396 UMPSP11172 480 aa9.2□□□□□ -0.94
PPFIA2-216ENST00000549396 LCP2Q13094 533 aa9.2□□□□□ -0.94
PPFIA2-216ENST00000549396 SLC39A5Q6ZMH5 540 aa9.2□□□□□ -0.94
PPFIA2-216ENST00000549396 ZDHHC13Q8IUH4 622 aa9.2□□□□□ -0.94
PPFIA2-216ENST00000549396 ZNF567Q8N184 647 aa9.2□□□□□ -0.94
PPFIA2-216ENST00000549396 TFAP2BQ92481 460 aa9.2□□□□□ -0.94
PPFIA2-216ENST00000549396 CNBD2Q96M20 576 aa9.2□□□□□ -0.94
PPFIA2-216ENST00000549396 SLC29A3Q9BZD2 475 aa9.2□□□□□ -0.94
PPFIA2-216ENST00000549396 DUSP12Q9UNI6 340 aa9.2□□□□□ -0.94
PPFIA2-216ENST00000549396 PLLPQ9Y342 182 aa9.2□□□□□ -0.94
PPFIA2-216ENST00000549396 COPG1Q9Y678 874 aaKnown RBP9.2□□□□□ -0.94
PPFIA2-216ENST00000549396 MTMR11A4FU01 709 aa9.2□□□□□ -0.94
PPFIA2-216ENST00000549396 PRAMEF1O95521 474 aa9.2□□□□□ -0.94
PPFIA2-216ENST00000549396 MYL12AP19105 171 aa9.2□□□□□ -0.94
PPFIA2-216ENST00000549396 ATP6V1B2P21281 511 aa9.2□□□□□ -0.94
PPFIA2-216ENST00000549396 HNF4AP41235 474 aa9.2□□□□□ -0.94
PPFIA2-216ENST00000549396 MLLT6P55198 1093 aaPredicted RBP9.2□□□□□ -0.94
PPFIA2-216ENST00000549396 SLC34A1Q06495 639 aa9.2□□□□□ -0.94
PPFIA2-216ENST00000549396 RCN1Q15293 331 aa9.2□□□□□ -0.94
PPFIA2-216ENST00000549396 ZNF621Q6ZSS3 439 aa9.2□□□□□ -0.94
PPFIA2-216ENST00000549396 GPR65Q8IYL9 337 aa9.2□□□□□ -0.94
PPFIA2-216ENST00000549396 EFCAB3Q8N7B9 438 aa9.2□□□□□ -0.94
PPFIA2-216ENST00000549396 ZNF614Q8N883 585 aa9.2□□□□□ -0.94
PPFIA2-216ENST00000549396 SCAIQ8N9R8 606 aa9.2□□□□□ -0.94
PPFIA2-216ENST00000549396 DPEP3Q9H4B8 488 aa9.2□□□□□ -0.94
PPFIA2-216ENST00000549396 ZDHHC7Q9NXF8 308 aa9.2□□□□□ -0.94
PPFIA2-216ENST00000549396 PGAP2Q9UHJ9 254 aa9.2□□□□□ -0.94
PPFIA2-216ENST00000549396 HAO1Q9UJM8 370 aa9.2□□□□□ -0.94
PPFIA2-216ENST00000549396 CHKBQ9Y259 395 aa9.2□□□□□ -0.94
PPFIA2-216ENST00000549396 TELO2Q9Y4R8 837 aa9.2□□□□□ -0.94
PPFIA2-216ENST00000549396 SNX13Q9Y5W8 968 aa9.2□□□□□ -0.94
PPFIA2-216ENST00000549396 RHPN2P1A8MT19 583 aa9.2□□□□□ -0.94
PPFIA2-216ENST00000549396 USP12O75317 370 aa9.2□□□□□ -0.94
PPFIA2-216ENST00000549396 WFS1O76024 890 aa9.2□□□□□ -0.94
PPFIA2-216ENST00000549396 DLG1Q12959 904 aa9.2□□□□□ -0.94
PPFIA2-216ENST00000549396 SLC1A5Q15758 541 aa9.2□□□□□ -0.94
PPFIA2-216ENST00000549396 ITPRIPL2Q3MIP1 535 aa9.2□□□□□ -0.94
PPFIA2-216ENST00000549396 LRRC23Q53EV4 343 aaPredicted RBP9.2□□□□□ -0.94
PPFIA2-216ENST00000549396 DEPDC1Q5TB30 811 aa9.2□□□□□ -0.94
PPFIA2-216ENST00000549396 MBLAC2Q68D91 279 aa9.2□□□□□ -0.94
PPFIA2-216ENST00000549396 RBM23Q86U06 439 aaKnown RBP9.2□□□□□ -0.94
PPFIA2-216ENST00000549396 SNX32Q86XE0 403 aa9.2□□□□□ -0.94
PPFIA2-216ENST00000549396 CNTD1Q8N815 330 aa9.2□□□□□ -0.94
PPFIA2-216ENST00000549396 OR2AP1Q8NGE2 309 aa9.2□□□□□ -0.94
PPFIA2-216ENST00000549396 CPT1BQ92523 772 aa9.2□□□□□ -0.94
PPFIA2-216ENST00000549396 ALG3Q92685 438 aa9.2□□□□□ -0.94
PPFIA2-216ENST00000549396 ZSCAN32Q9NX65 697 aa9.2□□□□□ -0.94
PPFIA2-216ENST00000549396 SUCOQ9UBS9 1254 aaKnown RBP9.2□□□□□ -0.94
PPFIA2-216ENST00000549396 GSAPA4D1B5 854 aa9.19□□□□□ -0.94
PPFIA2-216ENST00000549396 AP3D1O14617 1153 aa9.19□□□□□ -0.94
PPFIA2-216ENST00000549396 LIN7AO14910 233 aaPredicted RBP9.19□□□□□ -0.94
PPFIA2-216ENST00000549396 LILRB3O75022 631 aa9.19□□□□□ -0.94
PPFIA2-216ENST00000549396 TNFP01375 233 aa9.19□□□□□ -0.94
PPFIA2-216ENST00000549396 OR4Q2P0C623 313 aa9.19□□□□□ -0.94
PPFIA2-216ENST00000549396 ATP5A1P25705 553 aaKnown RBP9.19□□□□□ -0.94
PPFIA2-216ENST00000549396 TXNL4AP83876 142 aaKnown RBP9.19□□□□□ -0.94
PPFIA2-216ENST00000549396 GALNT2Q10471 571 aa9.19□□□□□ -0.94
PPFIA2-216ENST00000549396 SLC14A2Q15849 920 aa9.19□□□□□ -0.94
PPFIA2-216ENST00000549396 TMEM44Q2T9K0 475 aa9.19□□□□□ -0.94
PPFIA2-216ENST00000549396 PUS10Q3MIT2 529 aaKnown RBP9.19□□□□□ -0.94
PPFIA2-216ENST00000549396 SLC9A4Q6AI14 798 aa9.19□□□□□ -0.94
PPFIA2-216ENST00000549396 VITQ6UXI7 678 aa9.19□□□□□ -0.94
PPFIA2-216ENST00000549396 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.19□□□□□ -0.94
PPFIA2-216ENST00000549396 PLEKHM3Q6ZWE6 761 aa9.19□□□□□ -0.94
PPFIA2-216ENST00000549396 OR14C36Q8NHC7 312 aa9.19□□□□□ -0.94
PPFIA2-216ENST00000549396 KCTD4Q8WVF5 259 aa9.19□□□□□ -0.94
PPFIA2-216ENST00000549396 ABCG4Q9H172 646 aa9.19□□□□□ -0.94
PPFIA2-216ENST00000549396 MIR1-1HGQ9H1L0 117 aa9.19□□□□□ -0.94
PPFIA2-216ENST00000549396 CFL2Q9Y281 166 aa9.19□□□□□ -0.94
PPFIA2-216ENST00000549396 REXO2Q9Y3B8 237 aaKnown RBP9.19□□□□□ -0.94
PPFIA2-216ENST00000549396 NEMP2A6NFY4 417 aa9.19□□□□□ -0.94
PPFIA2-216ENST00000549396 C9IYK1 514 aa9.19□□□□□ -0.94
PPFIA2-216ENST00000549396 IFNA16P05015 189 aa9.19□□□□□ -0.94
PPFIA2-216ENST00000549396 IQCF3P0C7M6 154 aa9.19□□□□□ -0.94
PPFIA2-216ENST00000549396 ZSCAN5DPP0CG00 497 aa9.19□□□□□ -0.94
PPFIA2-216ENST00000549396 VAV1P15498 845 aa9.19□□□□□ -0.94
PPFIA2-216ENST00000549396 CENPAP49450 140 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms