RNA–Protein interactions for RNA: ENST00000549354.6

LINC00661-204, long intergenic non-protein coding RNA 661, humanhuman

TSL 1 (best) BASIC

Gene LINC00661, Length 3,340 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00661-204ENST00000549354 ABLIM3O94929 683 aa11.05□□□□□ -0.64
LINC00661-204ENST00000549354 ATF6P18850 670 aa11.05□□□□□ -0.64
LINC00661-204ENST00000549354 GSSP48637 474 aa11.05□□□□□ -0.64
LINC00661-204ENST00000549354 ALDH7A1P49419 539 aaKnown RBP11.05□□□□□ -0.64
LINC00661-204ENST00000549354 TAF10Q12962 218 aa11.05□□□□□ -0.64
LINC00661-204ENST00000549354 REP15Q6BDI9 236 aa11.05□□□□□ -0.64
LINC00661-204ENST00000549354 ZFP1Q6P2D0 407 aa11.05□□□□□ -0.64
LINC00661-204ENST00000549354 OR13C4Q8NGS5 318 aa11.05□□□□□ -0.64
LINC00661-204ENST00000549354 ARMC5Q96C12 935 aa11.05□□□□□ -0.64
LINC00661-204ENST00000549354 C3orf30Q96M34 536 aa11.05□□□□□ -0.64
LINC00661-204ENST00000549354 TBL1YQ9BQ87 522 aa11.05□□□□□ -0.64
LINC00661-204ENST00000549354 C1QTNF1Q9BXJ1 281 aa11.05□□□□□ -0.64
LINC00661-204ENST00000549354 NACA2Q9H009 215 aa11.05□□□□□ -0.64
LINC00661-204ENST00000549354 EPS8L2Q9H6S3 715 aa11.05□□□□□ -0.64
LINC00661-204ENST00000549354 CARNS1A5YM72 827 aa11.05□□□□□ -0.64
LINC00661-204ENST00000549354 IQCF5A8MTL0 148 aa11.05□□□□□ -0.64
LINC00661-204ENST00000549354 UBXN8O00124 270 aa11.05□□□□□ -0.64
LINC00661-204ENST00000549354 MATN3O15232 486 aa11.05□□□□□ -0.64
LINC00661-204ENST00000549354 ATP6V1G1O75348 118 aa11.05□□□□□ -0.64
LINC00661-204ENST00000549354 ZBTB11O95625 1053 aaPredicted RBP11.05□□□□□ -0.64
LINC00661-204ENST00000549354 RHOQP17081 205 aa11.05□□□□□ -0.64
LINC00661-204ENST00000549354 WNT3AP56704 352 aa11.05□□□□□ -0.64
LINC00661-204ENST00000549354 RAB10P61026 200 aa11.05□□□□□ -0.64
LINC00661-204ENST00000549354 NAB1Q13506 487 aa11.05□□□□□ -0.64
LINC00661-204ENST00000549354 C5orf22Q49AR2 442 aa11.05□□□□□ -0.64
LINC00661-204ENST00000549354 KLC3Q6P597 504 aa11.05□□□□□ -0.64
LINC00661-204ENST00000549354 TTC33Q6PID6 262 aaPredicted RBP11.05□□□□□ -0.64
LINC00661-204ENST00000549354 PRSS55Q6UWB4 352 aaPredicted RBP11.05□□□□□ -0.64
LINC00661-204ENST00000549354 DEFB128Q7Z7B8 93 aa11.05□□□□□ -0.64
LINC00661-204ENST00000549354 HMGCLL1Q8TB92 370 aa11.05□□□□□ -0.64
LINC00661-204ENST00000549354 FBXL20Q96IG2 436 aa11.05□□□□□ -0.64
LINC00661-204ENST00000549354 BTN2A3PQ96KV6 586 aa11.05□□□□□ -0.64
LINC00661-204ENST00000549354 RHOJQ9H4E5 214 aa11.05□□□□□ -0.64
LINC00661-204ENST00000549354 ARMC7Q9H6L4 198 aa11.05□□□□□ -0.64
LINC00661-204ENST00000549354 RETREG1Q9H6L5 497 aa11.05□□□□□ -0.64
LINC00661-204ENST00000549354 TMEM248Q9NWD8 314 aa11.05□□□□□ -0.64
LINC00661-204ENST00000549354 CACNA2D2Q9NY47 1150 aa11.05□□□□□ -0.64
LINC00661-204ENST00000549354 MYRFQ9Y2G1 1151 aa11.05□□□□□ -0.64
LINC00661-204ENST00000549354 MAGED1Q9Y5V3 778 aaPredicted RBP11.05□□□□□ -0.64
LINC00661-204ENST00000549354 ADAM12O43184 909 aa11.04□□□□□ -0.64
LINC00661-204ENST00000549354 IRF1P10914 325 aa11.04□□□□□ -0.64
LINC00661-204ENST00000549354 BMP1P13497 986 aa11.04□□□□□ -0.64
LINC00661-204ENST00000549354 KPNA1P52294 538 aaPredicted RBP11.04□□□□□ -0.64
LINC00661-204ENST00000549354 SULT2A1Q06520 285 aa11.04□□□□□ -0.64
LINC00661-204ENST00000549354 DUSP4Q13115 394 aa11.04□□□□□ -0.64
LINC00661-204ENST00000549354 RABL3Q5HYI8 236 aa11.04□□□□□ -0.64
LINC00661-204ENST00000549354 MS4A13Q5J8X5 152 aa11.04□□□□□ -0.64
LINC00661-204ENST00000549354 GPR107Q5VW38 600 aa11.04□□□□□ -0.64
LINC00661-204ENST00000549354 RAP1GAP2Q684P5 730 aa11.04□□□□□ -0.64
LINC00661-204ENST00000549354 CHSY3Q70JA7 882 aa11.04□□□□□ -0.64
LINC00661-204ENST00000549354 GPR65Q8IYL9 337 aa11.04□□□□□ -0.64
LINC00661-204ENST00000549354 ATP6V0D2Q8N8Y2 350 aa11.04□□□□□ -0.64
LINC00661-204ENST00000549354 CDC26Q8NHZ8 85 aa11.04□□□□□ -0.64
LINC00661-204ENST00000549354 PSMG2Q969U7 264 aa11.04□□□□□ -0.64
LINC00661-204ENST00000549354 SLCO4A1Q96BD0 722 aa11.04□□□□□ -0.64
LINC00661-204ENST00000549354 CDK5RAP1Q96SZ6 601 aaKnown RBP11.04□□□□□ -0.64
LINC00661-204ENST00000549354 GPR22Q99680 433 aa11.04□□□□□ -0.64
LINC00661-204ENST00000549354 NAA50Q9GZZ1 169 aaKnown RBP11.04□□□□□ -0.64
LINC00661-204ENST00000549354 PAIP1Q9H074 479 aaKnown RBP11.04□□□□□ -0.64
LINC00661-204ENST00000549354 NOL6Q9H6R4 1146 aaKnown RBP11.04□□□□□ -0.64
LINC00661-204ENST00000549354 CHCHD3Q9NX63 227 aaKnown RBP11.04□□□□□ -0.64
LINC00661-204ENST00000549354 BCAP29Q9UHQ4 241 aa11.04□□□□□ -0.64
LINC00661-204ENST00000549354 IPO11Q9UI26 975 aaKnown RBP11.04□□□□□ -0.64
LINC00661-204ENST00000549354 CNOT6Q9ULM6 557 aaKnown RBP11.04□□□□□ -0.64
LINC00661-204ENST00000549354 AP3B1O00203 1094 aa11.04□□□□□ -0.64
LINC00661-204ENST00000549354 GIPC1O14908 333 aa11.04□□□□□ -0.64
LINC00661-204ENST00000549354 H6PDO95479 791 aa11.04□□□□□ -0.64
LINC00661-204ENST00000549354 GUCA1CO95843 209 aa11.04□□□□□ -0.64
LINC00661-204ENST00000549354 CLTBP09497 229 aa11.04□□□□□ -0.64
LINC00661-204ENST00000549354 DNAJB2P25686 324 aa11.04□□□□□ -0.64
LINC00661-204ENST00000549354 PRDX6P30041 224 aa11.04□□□□□ -0.64
LINC00661-204ENST00000549354 FMO4P31512 558 aa11.04□□□□□ -0.64
LINC00661-204ENST00000549354 TUFMP49411 452 aaKnown RBP11.04□□□□□ -0.64
LINC00661-204ENST00000549354 TBCELQ5QJ74 424 aa11.04□□□□□ -0.64
LINC00661-204ENST00000549354 NAPEPLDQ6IQ20 393 aa11.04□□□□□ -0.64
LINC00661-204ENST00000549354 HMBOX1Q6NT76 420 aa11.04□□□□□ -0.64
LINC00661-204ENST00000549354 CUZD1Q86UP6 607 aa11.04□□□□□ -0.64
LINC00661-204ENST00000549354 SLC39A11Q8N1S5 342 aa11.04□□□□□ -0.64
LINC00661-204ENST00000549354 PDZD8Q8NEN9 1154 aa11.04□□□□□ -0.64
LINC00661-204ENST00000549354 PPHLN1Q8NEY8 458 aaKnown RBP11.04□□□□□ -0.64
LINC00661-204ENST00000549354 STYXQ8WUJ0 223 aa11.04□□□□□ -0.64
LINC00661-204ENST00000549354 HERC2P3Q9BVR0 1158 aa11.04□□□□□ -0.64
LINC00661-204ENST00000549354 IL22Q9GZX6 179 aa11.04□□□□□ -0.64
LINC00661-204ENST00000549354 OLAHQ9NV23 265 aa11.04□□□□□ -0.64
LINC00661-204ENST00000549354 SLAMF8Q9P0V8 285 aa11.04□□□□□ -0.64
LINC00661-204ENST00000549354 AFF4Q9UHB7 1163 aaKnown RBP11.04□□□□□ -0.64
LINC00661-204ENST00000549354 SOD2P04179 222 aa11.04□□□□□ -0.64
LINC00661-204ENST00000549354 GJA8P48165 433 aa11.04□□□□□ -0.64
LINC00661-204ENST00000549354 CDKN1CP49918 316 aaPredicted RBP11.04□□□□□ -0.64
LINC00661-204ENST00000549354 DIO3P55073 304 aa11.04□□□□□ -0.64
LINC00661-204ENST00000549354 NAA20P61599 178 aa11.04□□□□□ -0.64
LINC00661-204ENST00000549354 PIGFQ07326 219 aa11.04□□□□□ -0.64
LINC00661-204ENST00000549354 TPGS2Q68CL5 300 aa11.04□□□□□ -0.64
LINC00661-204ENST00000549354 TICAM1Q8IUC6 712 aa11.04□□□□□ -0.64
LINC00661-204ENST00000549354 CATSPER1Q8NEC5 780 aa11.04□□□□□ -0.64
LINC00661-204ENST00000549354 GIPC2Q8TF65 315 aa11.04□□□□□ -0.64
LINC00661-204ENST00000549354 VPS50Q96JG6 964 aa11.04□□□□□ -0.64
LINC00661-204ENST00000549354 MYRFLQ96LU7 910 aa11.04□□□□□ -0.64
LINC00661-204ENST00000549354 PPP1R2P1Q96PQ5 205 aa11.04□□□□□ -0.64
LINC00661-204ENST00000549354 FCRL5Q96RD9 977 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms