RNA–Protein interactions for RNA: ENST00000548658.1

BEST3-209, Transcript of bestrophin 3, humanhuman

TSL 5

Gene BEST3, Length 572 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3-209ENST00000548658 PTPN3P26045 913 aa11.3□□□□□ -0.6
BEST3-209ENST00000548658 AK4P27144 223 aaPredicted RBP11.3□□□□□ -0.6
BEST3-209ENST00000548658 ALDH4A1P30038 563 aa11.3□□□□□ -0.6
BEST3-209ENST00000548658 ZNF75DP51815 510 aa11.3□□□□□ -0.6
BEST3-209ENST00000548658 PDX1P52945 283 aa11.3□□□□□ -0.6
BEST3-209ENST00000548658 NAP1L1P55209 391 aaKnown RBP11.3□□□□□ -0.6
BEST3-209ENST00000548658 DCDC1P59894 354 aa11.3□□□□□ -0.6
BEST3-209ENST00000548658 B4GALNT1Q00973 533 aa11.3□□□□□ -0.6
BEST3-209ENST00000548658 ZFP36L1Q07352 338 aaKnown RBP11.3□□□□□ -0.6
BEST3-209ENST00000548658 XRCC4Q13426 336 aa11.3□□□□□ -0.6
BEST3-209ENST00000548658 GALNT3Q14435 633 aa11.3□□□□□ -0.6
BEST3-209ENST00000548658 NR1D2Q14995 579 aa11.3□□□□□ -0.6
BEST3-209ENST00000548658 PPP2R5EQ16537 467 aa11.3□□□□□ -0.6
BEST3-209ENST00000548658 PCSK7Q16549 785 aa11.3□□□□□ -0.6
BEST3-209ENST00000548658 ZDHHC20Q5W0Z9 365 aa11.3□□□□□ -0.6
BEST3-209ENST00000548658 KAZNQ674X7 775 aa11.3□□□□□ -0.6
BEST3-209ENST00000548658 LYSMD3Q7Z3D4 306 aa11.3□□□□□ -0.6
BEST3-209ENST00000548658 GPR155Q7Z3F1 870 aa11.3□□□□□ -0.6
BEST3-209ENST00000548658 TMC3Q7Z5M5 1100 aa11.3□□□□□ -0.6
BEST3-209ENST00000548658 CLEC14AQ86T13 490 aa11.3□□□□□ -0.6
BEST3-209ENST00000548658 NAGSQ8N159 534 aa11.3□□□□□ -0.6
BEST3-209ENST00000548658 TXLNBQ8N3L3 684 aa11.3□□□□□ -0.6
BEST3-209ENST00000548658 AVL9Q8NBF6 648 aa11.3□□□□□ -0.6
BEST3-209ENST00000548658 PRR11Q96HE9 360 aaPredicted RBP11.3□□□□□ -0.6
BEST3-209ENST00000548658 UBL7Q96S82 380 aaPredicted RBP11.3□□□□□ -0.6
BEST3-209ENST00000548658 AGAP2Q99490 1192 aa11.3□□□□□ -0.6
BEST3-209ENST00000548658 CEP41Q9BYV8 373 aa11.3□□□□□ -0.6
BEST3-209ENST00000548658 GPR63Q9BZJ6 419 aa11.3□□□□□ -0.6
BEST3-209ENST00000548658 CARD9Q9H257 536 aa11.3□□□□□ -0.6
BEST3-209ENST00000548658 TRABDQ9H4I3 376 aa11.3□□□□□ -0.6
BEST3-209ENST00000548658 PRORYQ9H606 182 aa11.3□□□□□ -0.6
BEST3-209ENST00000548658 STN1Q9H668 368 aaKnown RBP11.3□□□□□ -0.6
BEST3-209ENST00000548658 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP11.3□□□□□ -0.6
BEST3-209ENST00000548658 NFKBIL1Q9UBC1 381 aaPredicted RBP11.3□□□□□ -0.6
BEST3-209ENST00000548658 SAE1Q9UBE0 346 aaPredicted RBP11.3□□□□□ -0.6
BEST3-209ENST00000548658 FAM153AQ9UHL3 310 aa11.3□□□□□ -0.6
BEST3-209ENST00000548658 TRHDEQ9UKU6 1024 aa11.3□□□□□ -0.6
BEST3-209ENST00000548658 hCG_1818297A0A087WSY0 165 aa11.29□□□□□ -0.6
BEST3-209ENST00000548658 TEX51A0A1B0GUA7 166 aa11.29□□□□□ -0.6
BEST3-209ENST00000548658 OR5K4A6NMS3 321 aa11.29□□□□□ -0.6
BEST3-209ENST00000548658 EIF4E1BA6NMX2 242 aaKnown RBP11.29□□□□□ -0.6
BEST3-209ENST00000548658 BTNL10A8MVZ5 291 aa11.29□□□□□ -0.6
BEST3-209ENST00000548658 KLK10O43240 276 aa11.29□□□□□ -0.6
BEST3-209ENST00000548658 B4GAT1O43505 415 aa11.29□□□□□ -0.6
BEST3-209ENST00000548658 DNAJC6O75061 913 aa11.29□□□□□ -0.6
BEST3-209ENST00000548658 PMPCBO75439 489 aa11.29□□□□□ -0.6
BEST3-209ENST00000548658 ZNF189O75820 626 aaPredicted RBP11.29□□□□□ -0.6
BEST3-209ENST00000548658 SLC25A14O95258 325 aaPredicted RBP11.29□□□□□ -0.6
BEST3-209ENST00000548658 FASLGP48023 281 aa11.29□□□□□ -0.6
BEST3-209ENST00000548658 MAZP56270 477 aaKnown RBP11.29□□□□□ -0.6
BEST3-209ENST00000548658 TMPRSS3P57727 454 aa11.29□□□□□ -0.6
BEST3-209ENST00000548658 GPLD1P80108 840 aa11.29□□□□□ -0.6
BEST3-209ENST00000548658 SQSTM1Q13501 440 aa11.29□□□□□ -0.6
BEST3-209ENST00000548658 MAP9Q49MG5 647 aa11.29□□□□□ -0.6
BEST3-209ENST00000548658 ZNF569Q5MCW4 686 aa11.29□□□□□ -0.6
BEST3-209ENST00000548658 CCDC181Q5TID7 509 aa11.29□□□□□ -0.6
BEST3-209ENST00000548658 TMEM164Q5U3C3 297 aa11.29□□□□□ -0.6
BEST3-209ENST00000548658 BBS12Q6ZW61 710 aa11.29□□□□□ -0.6
BEST3-209ENST00000548658 MARK2Q7KZI7 788 aaKnown RBP11.29□□□□□ -0.6
BEST3-209ENST00000548658 PID1Q7Z2X4 250 aa11.29□□□□□ -0.6
BEST3-209ENST00000548658 KDELC2Q7Z4H8 507 aa11.29□□□□□ -0.6
BEST3-209ENST00000548658 B3GNT8Q7Z7M8 397 aa11.29□□□□□ -0.6
BEST3-209ENST00000548658 TRIM74Q86UV6 250 aa11.29□□□□□ -0.6
BEST3-209ENST00000548658 ZC3H18Q86VM9 953 aaKnown RBP11.29□□□□□ -0.6
BEST3-209ENST00000548658 TRAM1L1Q8N609 369 aa11.29□□□□□ -0.6
BEST3-209ENST00000548658 LSM14AQ8ND56 463 aaKnown RBP11.29□□□□□ -0.6
BEST3-209ENST00000548658 HTR3CQ8WXA8 447 aa11.29□□□□□ -0.6
BEST3-209ENST00000548658 SH3KBP1Q96B97 665 aa11.29□□□□□ -0.6
BEST3-209ENST00000548658 FCRL3Q96P31 734 aaPredicted RBP11.29□□□□□ -0.6
BEST3-209ENST00000548658 FCRL5Q96RD9 977 aa11.29□□□□□ -0.6
BEST3-209ENST00000548658 WDR24Q96S15 920 aa11.29□□□□□ -0.6
BEST3-209ENST00000548658 SPATA16Q9BXB7 569 aa11.29□□□□□ -0.6
BEST3-209ENST00000548658 FOXP3Q9BZS1 431 aa11.29□□□□□ -0.6
BEST3-209ENST00000548658 B3GNT4Q9C0J1 378 aa11.29□□□□□ -0.6
BEST3-209ENST00000548658 TRIM39Q9HCM9 518 aa11.29□□□□□ -0.6
BEST3-209ENST00000548658 HACD3Q9P035 362 aa11.29□□□□□ -0.6
BEST3-209ENST00000548658 KLHL8Q9P2G9 620 aaPredicted RBP11.29□□□□□ -0.6
BEST3-209ENST00000548658 CNOT6Q9ULM6 557 aaKnown RBP11.29□□□□□ -0.6
BEST3-209ENST00000548658 SHOC2Q9UQ13 582 aa11.29□□□□□ -0.6
BEST3-209ENST00000548658 ZNF711Q9Y462 761 aa11.29□□□□□ -0.6
BEST3-209ENST00000548658 CACNA1GO43497 2377 aa11.29□□□□□ -0.6
BEST3-209ENST00000548658 LOC285095A0A1B0GVY8 99 aa11.28□□□□□ -0.6
BEST3-209ENST00000548658 A0A1W2PNU3 283 aaPredicted RBP11.28□□□□□ -0.6
BEST3-209ENST00000548658 CCDC66A2RUB6 948 aa11.28□□□□□ -0.6
BEST3-209ENST00000548658 FADS2P1A8MWK0 482 aa11.28□□□□□ -0.6
BEST3-209ENST00000548658 APOC4-APOC2K7ER74 178 aa11.28□□□□□ -0.6
BEST3-209ENST00000548658 TK2O00142 265 aa11.28□□□□□ -0.6
BEST3-209ENST00000548658 HGSO14964 777 aaPredicted RBP11.28□□□□□ -0.6
BEST3-209ENST00000548658 NVLO15381 856 aaKnown RBP11.28□□□□□ -0.6
BEST3-209ENST00000548658 GRID2O43424 1007 aa11.28□□□□□ -0.6
BEST3-209ENST00000548658 NUAK1O60285 661 aa11.28□□□□□ -0.6
BEST3-209ENST00000548658 PPFIA2O75334 1257 aa11.28□□□□□ -0.6
BEST3-209ENST00000548658 MT-CYBP00156 380 aaPredicted RBP11.28□□□□□ -0.6
BEST3-209ENST00000548658 APOC2P02655 101 aa11.28□□□□□ -0.6
BEST3-209ENST00000548658 ATP1A1P05023 1023 aaKnown RBP11.28□□□□□ -0.6
BEST3-209ENST00000548658 PECAM1P16284 738 aaPredicted RBP11.28□□□□□ -0.6
BEST3-209ENST00000548658 FECHP22830 423 aa11.28□□□□□ -0.6
BEST3-209ENST00000548658 CTNNA1P35221 906 aaKnown RBP11.28□□□□□ -0.6
BEST3-209ENST00000548658 UGT1A5P35504 534 aa11.28□□□□□ -0.6
BEST3-209ENST00000548658 HMGCLP35914 325 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms