RNA–Protein interactions for RNA: ENST00000546816.5

CCDC38-204, Transcript of coiled-coil domain containing 38, humanhuman

TSL 2

Gene CCDC38, Length 465 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-204ENST00000546816 TNFSF14O43557 240 aa3.91□□□□□ -1.78
CCDC38-204ENST00000546816 IGHV4-39P01824 125 aa3.91□□□□□ -1.78
CCDC38-204ENST00000546816 FAM106CPP0CH98 169 aa3.91□□□□□ -1.78
CCDC38-204ENST00000546816 ABCD1P33897 745 aa3.91□□□□□ -1.78
CCDC38-204ENST00000546816 APOBEC1P41238 236 aaKnown RBP3.91□□□□□ -1.78
CCDC38-204ENST00000546816 TERF1P54274 439 aa3.91□□□□□ -1.78
CCDC38-204ENST00000546816 GRIK2Q13002 908 aa3.91□□□□□ -1.78
CCDC38-204ENST00000546816 PPIGQ13427 754 aaKnown RBP eCLIP3.91□□□□□ -1.78
CCDC38-204ENST00000546816 DRAP1Q14919 205 aaPredicted RBP3.91□□□□□ -1.78
CCDC38-204ENST00000546816 TMEM35AQ53FP2 167 aa3.91□□□□□ -1.78
CCDC38-204ENST00000546816 SLC9C2Q5TAH2 1124 aa3.91□□□□□ -1.78
CCDC38-204ENST00000546816 C18orf63Q68DL7 685 aa3.91□□□□□ -1.78
CCDC38-204ENST00000546816 SLC35E4Q6ICL7 350 aa3.91□□□□□ -1.78
CCDC38-204ENST00000546816 OR7E24Q6IFN5 339 aa3.91□□□□□ -1.78
CCDC38-204ENST00000546816 SLC27A1Q6PCB7 646 aa3.91□□□□□ -1.78
CCDC38-204ENST00000546816 SRBD1Q8N5C6 995 aaKnown RBP3.91□□□□□ -1.78
CCDC38-204ENST00000546816 OR52I2Q8NH67 350 aa3.91□□□□□ -1.78
CCDC38-204ENST00000546816 THAP6Q8TBB0 222 aa3.91□□□□□ -1.78
CCDC38-204ENST00000546816 APBB2Q92870 758 aa3.91□□□□□ -1.78
CCDC38-204ENST00000546816 TAAR8Q969N4 342 aa3.91□□□□□ -1.78
CCDC38-204ENST00000546816 SCRN2Q96FV2 425 aa3.91□□□□□ -1.78
CCDC38-204ENST00000546816 ACOX2Q99424 681 aa3.91□□□□□ -1.78
CCDC38-204ENST00000546816 TMEM47Q9BQJ4 181 aa3.91□□□□□ -1.78
CCDC38-204ENST00000546816 NEURL2Q9BR09 285 aa3.91□□□□□ -1.78
CCDC38-204ENST00000546816 LTB4R2Q9NPC1 389 aa3.91□□□□□ -1.78
CCDC38-204ENST00000546816 ASAH2Q9NR71 780 aa3.91□□□□□ -1.78
CCDC38-204ENST00000546816 ACSL5Q9ULC5 683 aa3.91□□□□□ -1.78
CCDC38-204ENST00000546816 AAR2Q9Y312 384 aaKnown RBP3.91□□□□□ -1.78
CCDC38-204ENST00000546816 IGLV5-45A0A087WSX0 123 aa3.9□□□□□ -1.79
CCDC38-204ENST00000546816 FAM237AA0A1B0GTK4 181 aa3.9□□□□□ -1.79
CCDC38-204ENST00000546816 LRRC53A6NM62 1247 aa3.9□□□□□ -1.79
CCDC38-204ENST00000546816 SYNGR3O43761 229 aa3.9□□□□□ -1.79
CCDC38-204ENST00000546816 POLR2CP19387 275 aaPredicted RBP3.9□□□□□ -1.79
CCDC38-204ENST00000546816 ARCN1P48444 511 aaKnown RBP3.9□□□□□ -1.79
CCDC38-204ENST00000546816 HSD17B4P51659 736 aa3.9□□□□□ -1.79
CCDC38-204ENST00000546816 CLDN20P56880 219 aa3.9□□□□□ -1.79
CCDC38-204ENST00000546816 GSTA3Q16772 222 aa3.9□□□□□ -1.79
CCDC38-204ENST00000546816 DCST1Q5T197 706 aa3.9□□□□□ -1.79
CCDC38-204ENST00000546816 TTI2Q6NXR4 508 aa3.9□□□□□ -1.79
CCDC38-204ENST00000546816 CEACAM20Q6UY09 585 aa3.9□□□□□ -1.79
CCDC38-204ENST00000546816 DPPA4Q7L190 304 aa3.9□□□□□ -1.79
CCDC38-204ENST00000546816 CCDC13Q8IYE1 715 aa3.9□□□□□ -1.79
CCDC38-204ENST00000546816 TRIM58Q8NG06 486 aa3.9□□□□□ -1.79
CCDC38-204ENST00000546816 SLC38A5Q8WUX1 472 aa3.9□□□□□ -1.79
CCDC38-204ENST00000546816 HTRA1Q92743 480 aa3.9□□□□□ -1.79
CCDC38-204ENST00000546816 IGSF8Q969P0 613 aa3.9□□□□□ -1.79
CCDC38-204ENST00000546816 RNF125Q96EQ8 232 aa3.9□□□□□ -1.79
CCDC38-204ENST00000546816 LINGO1Q96FE5 620 aa3.9□□□□□ -1.79
CCDC38-204ENST00000546816 NEUROD6Q96NK8 337 aa3.9□□□□□ -1.79
CCDC38-204ENST00000546816 VEZTQ9HBM0 779 aa3.9□□□□□ -1.79
CCDC38-204ENST00000546816 INTS6Q9UL03 887 aaKnown RBP3.9□□□□□ -1.79
CCDC38-204ENST00000546816 KLHL20Q9Y2M5 609 aa3.9□□□□□ -1.79
CCDC38-204ENST00000546816 PRKNO60260 465 aaPredicted RBP3.89□□□□□ -1.79
CCDC38-204ENST00000546816 F9P00740 461 aa3.89□□□□□ -1.79
CCDC38-204ENST00000546816 INHBAP08476 426 aa3.89□□□□□ -1.79
CCDC38-204ENST00000546816 AZU1P20160 251 aa3.89□□□□□ -1.79
CCDC38-204ENST00000546816 ZNF876PQ49A33 203 aa3.89□□□□□ -1.79
CCDC38-204ENST00000546816 WDR38Q5JTN6 314 aa3.89□□□□□ -1.79
CCDC38-204ENST00000546816 FAM69AQ5T7M9 428 aa3.89□□□□□ -1.79
CCDC38-204ENST00000546816 ZC2HC1BQ5TFG8 222 aa3.89□□□□□ -1.79
CCDC38-204ENST00000546816 ATF7IPQ6VMQ6 1270 aa3.89□□□□□ -1.79
CCDC38-204ENST00000546816 CACNA2D4Q7Z3S7 1137 aa3.89□□□□□ -1.79
CCDC38-204ENST00000546816 SLC44A1Q8WWI5 657 aa3.89□□□□□ -1.79
CCDC38-204ENST00000546816 PSPC1Q8WXF1 523 aaKnown RBP3.89□□□□□ -1.79
CCDC38-204ENST00000546816 PCGF1Q9BSM1 259 aa3.89□□□□□ -1.79
CCDC38-204ENST00000546816 MOV10L1Q9BXT6 1211 aaKnown RBP3.89□□□□□ -1.79
CCDC38-204ENST00000546816 KIF9Q9HAQ2 790 aa3.89□□□□□ -1.79
CCDC38-204ENST00000546816 RRN3Q9NYV6 651 aa3.89□□□□□ -1.79
CCDC38-204ENST00000546816 POLG2Q9UHN1 485 aa3.89□□□□□ -1.79
CCDC38-204ENST00000546816 HAO1Q9UJM8 370 aa3.89□□□□□ -1.79
CCDC38-204ENST00000546816 FBXL2Q9UKC9 423 aa3.89□□□□□ -1.79
CCDC38-204ENST00000546816 CYP46A1Q9Y6A2 500 aa3.89□□□□□ -1.79
CCDC38-204ENST00000546816 KIAA1210Q9ULL0 1709 aa3.89□□□□□ -1.79
CCDC38-204ENST00000546816 A0A1W2PP11 408 aa3.88□□□□□ -1.79
CCDC38-204ENST00000546816 C5orf60A6NFR6 353 aa3.88□□□□□ -1.79
CCDC38-204ENST00000546816 EIF3DO15371 548 aaKnown RBP eCLIP3.88□□□□□ -1.79
CCDC38-204ENST00000546816 CTSVO60911 334 aa3.88□□□□□ -1.79
CCDC38-204ENST00000546816 PIP4K2AP48426 406 aaPredicted RBP3.88□□□□□ -1.79
CCDC38-204ENST00000546816 CCT5P48643 541 aa3.88□□□□□ -1.79
CCDC38-204ENST00000546816 TBX2Q13207 712 aaPredicted RBP3.88□□□□□ -1.79
CCDC38-204ENST00000546816 CXorf66Q5JRM2 361 aaPredicted RBP3.88□□□□□ -1.79
CCDC38-204ENST00000546816 ZNF704Q6ZNC4 412 aaPredicted RBP3.88□□□□□ -1.79
CCDC38-204ENST00000546816 ATG9AQ7Z3C6 839 aa3.88□□□□□ -1.79
CCDC38-204ENST00000546816 NOTCH2NLQ7Z3S9 236 aa3.88□□□□□ -1.79
CCDC38-204ENST00000546816 GPR180Q86V85 440 aa3.88□□□□□ -1.79
CCDC38-204ENST00000546816 MAP7D3Q8IWC1 876 aa3.88□□□□□ -1.79
CCDC38-204ENST00000546816 CNBD1Q8NA66 436 aa3.88□□□□□ -1.79
CCDC38-204ENST00000546816 GTF3C6Q969F1 213 aa3.88□□□□□ -1.79
CCDC38-204ENST00000546816 ZNF354BQ96LW1 612 aa3.88□□□□□ -1.79
CCDC38-204ENST00000546816 NR1H4Q96RI1 486 aaPredicted RBP3.88□□□□□ -1.79
CCDC38-204ENST00000546816 EIF2AK1Q9BQI3 630 aaKnown RBP3.88□□□□□ -1.79
CCDC38-204ENST00000546816 PYGO2Q9BRQ0 406 aa3.88□□□□□ -1.79
CCDC38-204ENST00000546816 SLC25A18Q9H1K4 315 aa3.88□□□□□ -1.79
CCDC38-204ENST00000546816 TFB2MQ9H5Q4 396 aaKnown RBP3.88□□□□□ -1.79
CCDC38-204ENST00000546816 ZNF624Q9P2J8 865 aaPredicted RBP3.88□□□□□ -1.79
CCDC38-204ENST00000546816 NAALADL1Q9UQQ1 740 aa3.88□□□□□ -1.79
CCDC38-204ENST00000546816 CAPN7Q9Y6W3 813 aa3.88□□□□□ -1.79
CCDC38-204ENST00000546816 CACNA1FO60840 1977 aa3.87□□□□□ -1.79
CCDC38-204ENST00000546816 RRN3P2A6NIE6 340 aa3.87□□□□□ -1.79
CCDC38-204ENST00000546816 TTC36A6NLP5 189 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms