RNA–Protein interactions for RNA: ENST00000546080.5

SRP54-202, Transcript of signal recognition particle 54, humanhuman

TSL 2 BASIC

Gene SRP54, Length 2,187 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-202ENST00000546080 SIX3O95343 332 aaPredicted RBP14.15□□□□□ -0.15
SRP54-202ENST00000546080 HLA-DQB2P05538 268 aa14.15□□□□□ -0.15
SRP54-202ENST00000546080 DPEP1P16444 411 aa14.15□□□□□ -0.15
SRP54-202ENST00000546080 IL7RP16871 459 aa14.15□□□□□ -0.15
SRP54-202ENST00000546080 NR4A1P22736 598 aa14.15□□□□□ -0.15
SRP54-202ENST00000546080 AQP6Q13520 282 aa14.15□□□□□ -0.15
SRP54-202ENST00000546080 POLD3Q15054 466 aaPredicted RBP14.15□□□□□ -0.15
SRP54-202ENST00000546080 NOMO2Q5JPE7 1267 aa14.15□□□□□ -0.15
SRP54-202ENST00000546080 NOL9Q5SY16 702 aaKnown RBP14.15□□□□□ -0.15
SRP54-202ENST00000546080 NOTUMQ6P988 496 aa14.15□□□□□ -0.15
SRP54-202ENST00000546080 PIM3Q86V86 326 aa14.15□□□□□ -0.15
SRP54-202ENST00000546080 PNPLA1Q8N8W4 532 aa14.15□□□□□ -0.15
SRP54-202ENST00000546080 OR52K2Q8NGK3 314 aa14.15□□□□□ -0.15
SRP54-202ENST00000546080 BPIFB1Q8TDL5 484 aa14.15□□□□□ -0.15
SRP54-202ENST00000546080 TSPEARQ8WU66 669 aa14.15□□□□□ -0.15
SRP54-202ENST00000546080 PTERQ96BW5 349 aa14.15□□□□□ -0.15
SRP54-202ENST00000546080 MRGPRX2Q96LB1 330 aa14.15□□□□□ -0.15
SRP54-202ENST00000546080 ZNF641Q96N77 438 aaPredicted RBP14.15□□□□□ -0.15
SRP54-202ENST00000546080 PSD2Q9BQI7 771 aa14.15□□□□□ -0.15
SRP54-202ENST00000546080 TUBB1Q9H4B7 451 aa14.15□□□□□ -0.15
SRP54-202ENST00000546080 NUP205Q92621 2012 aa14.14□□□□□ -0.15
SRP54-202ENST00000546080 SMIM28A0A1B0GU29 152 aa14.14□□□□□ -0.15
SRP54-202ENST00000546080 CCDC154A6NI56 674 aa14.14□□□□□ -0.15
SRP54-202ENST00000546080 MATN3O15232 486 aa14.14□□□□□ -0.15
SRP54-202ENST00000546080 KPNA6O60684 536 aa14.14□□□□□ -0.15
SRP54-202ENST00000546080 DEAF1O75398 565 aaPredicted RBP14.14□□□□□ -0.15
SRP54-202ENST00000546080 CDH1P12830 882 aa14.14□□□□□ -0.15
SRP54-202ENST00000546080 HRH2P25021 359 aa14.14□□□□□ -0.15
SRP54-202ENST00000546080 HTR1EP28566 365 aa14.14□□□□□ -0.15
SRP54-202ENST00000546080 SLC26A3P40879 764 aa14.14□□□□□ -0.15
SRP54-202ENST00000546080 CXCR3P49682 368 aa14.14□□□□□ -0.15
SRP54-202ENST00000546080 DIO3P55073 304 aa14.14□□□□□ -0.15
SRP54-202ENST00000546080 ARHGAP1Q07960 439 aa14.14□□□□□ -0.15
SRP54-202ENST00000546080 IMPG1Q17R60 797 aa14.14□□□□□ -0.15
SRP54-202ENST00000546080 PAGE3Q5JUK9 113 aa14.14□□□□□ -0.15
SRP54-202ENST00000546080 PM20D1Q6GTS8 502 aa14.14□□□□□ -0.15
SRP54-202ENST00000546080 RANBP10Q6VN20 620 aa14.14□□□□□ -0.15
SRP54-202ENST00000546080 GPRIN1Q7Z2K8 1008 aa14.14□□□□□ -0.15
SRP54-202ENST00000546080 PIWIL3Q7Z3Z3 882 aaKnown RBP14.14□□□□□ -0.15
SRP54-202ENST00000546080 LIMS2Q7Z4I7 341 aa14.14□□□□□ -0.15
SRP54-202ENST00000546080 TFAP2DQ7Z6R9 452 aa14.14□□□□□ -0.15
SRP54-202ENST00000546080 CILP2Q8IUL8 1156 aa14.14□□□□□ -0.15
SRP54-202ENST00000546080 SLC22A17Q8WUG5 538 aa14.14□□□□□ -0.15
SRP54-202ENST00000546080 SGCDQ92629 289 aa14.14□□□□□ -0.15
SRP54-202ENST00000546080 HDAC2Q92769 488 aaKnown RBP14.14□□□□□ -0.15
SRP54-202ENST00000546080 FKBP10Q96AY3 582 aa14.14□□□□□ -0.15
SRP54-202ENST00000546080 NSMCE2Q96MF7 247 aa14.14□□□□□ -0.15
SRP54-202ENST00000546080 PIF1Q9H611 641 aa14.14□□□□□ -0.15
SRP54-202ENST00000546080 CNGB3Q9NQW8 809 aa14.14□□□□□ -0.15
SRP54-202ENST00000546080 LEF1Q9UJU2 399 aaPredicted RBP14.14□□□□□ -0.15
SRP54-202ENST00000546080 BAG5Q9UL15 447 aa14.14□□□□□ -0.15
SRP54-202ENST00000546080 USP22Q9UPT9 525 aa14.14□□□□□ -0.15
SRP54-202ENST00000546080 GPR45Q9Y5Y3 372 aa14.14□□□□□ -0.15
SRP54-202ENST00000546080 ZFC3H1O60293 1989 aaKnown RBP14.13□□□□□ -0.15
SRP54-202ENST00000546080 ASPDHA6ND91 283 aa14.13□□□□□ -0.15
SRP54-202ENST00000546080 LRRC14BA6NHZ5 514 aa14.13□□□□□ -0.15
SRP54-202ENST00000546080 VPS4BO75351 444 aa14.13□□□□□ -0.15
SRP54-202ENST00000546080 EEDO75530 441 aaKnown RBP14.13□□□□□ -0.15
SRP54-202ENST00000546080 CRCPO75575 148 aa14.13□□□□□ -0.15
SRP54-202ENST00000546080 SLC4A1P02730 911 aa14.13□□□□□ -0.15
SRP54-202ENST00000546080 ALPLP05186 524 aa14.13□□□□□ -0.15
SRP54-202ENST00000546080 RCAN2Q14206 197 aa14.13□□□□□ -0.15
SRP54-202ENST00000546080 KCTD2Q14681 263 aa14.13□□□□□ -0.15
SRP54-202ENST00000546080 CRY1Q16526 586 aa14.13□□□□□ -0.15
SRP54-202ENST00000546080 LDB1Q86U70 411 aaPredicted RBP14.13□□□□□ -0.15
SRP54-202ENST00000546080 STK32CQ86UX6 486 aa14.13□□□□□ -0.15
SRP54-202ENST00000546080 ARHGAP12Q8IWW6 846 aa14.13□□□□□ -0.15
SRP54-202ENST00000546080 CADM3Q8N126 398 aa14.13□□□□□ -0.15
SRP54-202ENST00000546080 TOP6BLQ8N6T0 577 aa14.13□□□□□ -0.15
SRP54-202ENST00000546080 S100ZQ8WXG8 99 aa14.13□□□□□ -0.15
SRP54-202ENST00000546080 HPS1Q92902 700 aa14.13□□□□□ -0.15
SRP54-202ENST00000546080 TMBIM1Q969X1 311 aa14.13□□□□□ -0.15
SRP54-202ENST00000546080 SDCCAG3Q96C92 435 aa14.13□□□□□ -0.15
SRP54-202ENST00000546080 NSUN5Q96P11 429 aaKnown RBP14.13□□□□□ -0.15
SRP54-202ENST00000546080 RMI1Q9H9A7 625 aa14.13□□□□□ -0.15
SRP54-202ENST00000546080 AKIP1Q9NQ31 210 aa14.13□□□□□ -0.15
SRP54-202ENST00000546080 RBM22Q9NW64 420 aaKnown RBP eCLIP14.13□□□□□ -0.15
SRP54-202ENST00000546080 MTRRQ9UBK8 725 aa14.13□□□□□ -0.15
SRP54-202ENST00000546080 ENPP5Q9UJA9 477 aa14.13□□□□□ -0.15
SRP54-202ENST00000546080 PDE10AQ9Y233 779 aa14.13□□□□□ -0.15
SRP54-202ENST00000546080 SNX5Q9Y5X3 404 aa14.13□□□□□ -0.15
SRP54-202ENST00000546080 TBC1D4O60343 1298 aa14.13□□□□□ -0.15
SRP54-202ENST00000546080 MAFKO60675 156 aa14.13□□□□□ -0.15
SRP54-202ENST00000546080 JRKO75564 520 aa14.13□□□□□ -0.15
SRP54-202ENST00000546080 WISP3O95389 354 aaPredicted RBP14.13□□□□□ -0.15
SRP54-202ENST00000546080 OXSR1O95747 527 aaPredicted RBP14.13□□□□□ -0.15
SRP54-202ENST00000546080 SLC25A27O95847 323 aa14.13□□□□□ -0.15
SRP54-202ENST00000546080 CES1P23141 567 aa14.13□□□□□ -0.15
SRP54-202ENST00000546080 HTR1BP28222 390 aa14.13□□□□□ -0.15
SRP54-202ENST00000546080 GABARAPL2P60520 117 aa14.13□□□□□ -0.15
SRP54-202ENST00000546080 PFKFB4Q16877 469 aa14.13□□□□□ -0.15
SRP54-202ENST00000546080 ZNF362Q5T0B9 420 aaPredicted RBP14.13□□□□□ -0.15
SRP54-202ENST00000546080 TTC23Q5W5X9 447 aa14.13□□□□□ -0.15
SRP54-202ENST00000546080 GLYATQ6IB77 296 aa14.13□□□□□ -0.15
SRP54-202ENST00000546080 SLC16A12Q6ZSM3 486 aa14.13□□□□□ -0.15
SRP54-202ENST00000546080 CCDC80Q76M96 950 aa14.13□□□□□ -0.15
SRP54-202ENST00000546080 SPATA19Q7Z5L4 167 aa14.13□□□□□ -0.15
SRP54-202ENST00000546080 APOBEC3FQ8IUX4 373 aaKnown RBP14.13□□□□□ -0.15
SRP54-202ENST00000546080 RIMKLAQ8IXN7 391 aa14.13□□□□□ -0.15
SRP54-202ENST00000546080 KIAA2013Q8IYS2 634 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms