RNA–Protein interactions for RNA: ENST00000545908.5

MTHFD1-202, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 2 BASIC

Gene MTHFD1, Length 6,814 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-202ENST00000545908 BRINP2Q9C0B6 783 aa9□□□□□ -0.97
MTHFD1-202ENST00000545908 SUV39H2Q9H5I1 410 aa9□□□□□ -0.97
MTHFD1-202ENST00000545908 ZNF490Q9ULM2 529 aaPredicted RBP9□□□□□ -0.97
MTHFD1-202ENST00000545908 KLF8O95600 359 aaPredicted RBP9□□□□□ -0.97
MTHFD1-202ENST00000545908 LRPAP1P30533 357 aa9□□□□□ -0.97
MTHFD1-202ENST00000545908 VIPR1P32241 457 aa9□□□□□ -0.97
MTHFD1-202ENST00000545908 NUP107P57740 925 aa9□□□□□ -0.97
MTHFD1-202ENST00000545908 IRF5Q13568 498 aa9□□□□□ -0.97
MTHFD1-202ENST00000545908 CPSF6Q16630 551 aaKnown RBP eCLIP9□□□□□ -0.97
MTHFD1-202ENST00000545908 ITPRIPL2Q3MIP1 535 aa9□□□□□ -0.97
MTHFD1-202ENST00000545908 BRSK1Q8TDC3 778 aa9□□□□□ -0.97
MTHFD1-202ENST00000545908 ACMSDQ8TDX5 336 aa9□□□□□ -0.97
MTHFD1-202ENST00000545908 OSBPL10Q9BXB5 764 aa9□□□□□ -0.97
MTHFD1-202ENST00000545908 NSUN3Q9H649 340 aaKnown RBP9□□□□□ -0.97
MTHFD1-202ENST00000545908 CCDC177Q9NQR7 707 aaPredicted RBP9□□□□□ -0.97
MTHFD1-202ENST00000545908 FLRT1Q9NZU1 646 aa9□□□□□ -0.97
MTHFD1-202ENST00000545908 RGS17Q9UGC6 210 aaPredicted RBP9□□□□□ -0.97
MTHFD1-202ENST00000545908 POLR3HQ9Y535 204 aaPredicted RBP9□□□□□ -0.97
MTHFD1-202ENST00000545908 S100A5P33763 92 aa9□□□□□ -0.97
MTHFD1-202ENST00000545908 POLD2P49005 469 aa9□□□□□ -0.97
MTHFD1-202ENST00000545908 DSG1Q02413 1049 aa9□□□□□ -0.97
MTHFD1-202ENST00000545908 WDR45BQ5MNZ6 344 aa9□□□□□ -0.97
MTHFD1-202ENST00000545908 SH3PXD2AQ5TCZ1 1133 aa9□□□□□ -0.97
MTHFD1-202ENST00000545908 ALKBH2Q6NS38 261 aa9□□□□□ -0.97
MTHFD1-202ENST00000545908 PACS1Q6VY07 963 aa9□□□□□ -0.97
MTHFD1-202ENST00000545908 LDB1Q86U70 411 aaPredicted RBP9□□□□□ -0.97
MTHFD1-202ENST00000545908 GKN2Q86XP6 184 aa9□□□□□ -0.97
MTHFD1-202ENST00000545908 ANKLE1Q8NAG6 615 aa9□□□□□ -0.97
MTHFD1-202ENST00000545908 SIDT2Q8NBJ9 832 aaKnown RBP9□□□□□ -0.97
MTHFD1-202ENST00000545908 AENQ8WTP8 325 aaKnown RBP9□□□□□ -0.97
MTHFD1-202ENST00000545908 DNAJC11Q9NVH1 559 aa9□□□□□ -0.97
MTHFD1-202ENST00000545908 DKK3Q9UBP4 350 aa9□□□□□ -0.97
MTHFD1-202ENST00000545908 MARF1Q9Y4F3 1742 aaKnown RBP9□□□□□ -0.97
MTHFD1-202ENST00000545908 GHRHRQ02643 423 aa9□□□□□ -0.97
MTHFD1-202ENST00000545908 CCNYL2Q5T2Q4 361 aa9□□□□□ -0.97
MTHFD1-202ENST00000545908 SYPL2Q5VXT5 272 aa9□□□□□ -0.97
MTHFD1-202ENST00000545908 TTC33Q6PID6 262 aaPredicted RBP9□□□□□ -0.97
MTHFD1-202ENST00000545908 DHFR2Q86XF0 187 aa9□□□□□ -0.97
MTHFD1-202ENST00000545908 C10orf107Q8IVU9 208 aa9□□□□□ -0.97
MTHFD1-202ENST00000545908 UTP15Q8TED0 518 aaKnown RBP9□□□□□ -0.97
MTHFD1-202ENST00000545908 PPP1R14AQ96A00 147 aa9□□□□□ -0.97
MTHFD1-202ENST00000545908 OR2AG1Q9H205 316 aa9□□□□□ -0.97
MTHFD1-202ENST00000545908 SLC9A8Q9Y2E8 581 aa9□□□□□ -0.97
MTHFD1-202ENST00000545908 LRRC14BA6NHZ5 514 aa9□□□□□ -0.97
MTHFD1-202ENST00000545908 WNT9AO14904 365 aa9□□□□□ -0.97
MTHFD1-202ENST00000545908 HCRTO43612 131 aa9□□□□□ -0.97
MTHFD1-202ENST00000545908 SLC28A2O43868 658 aa9□□□□□ -0.97
MTHFD1-202ENST00000545908 NT5EP21589 574 aa9□□□□□ -0.97
MTHFD1-202ENST00000545908 GPR17Q13304 367 aa9□□□□□ -0.97
MTHFD1-202ENST00000545908 TCHHL1Q5QJ38 904 aaPredicted RBP9□□□□□ -0.97
MTHFD1-202ENST00000545908 MFSD5Q6N075 450 aa9□□□□□ -0.97
MTHFD1-202ENST00000545908 TRAF7Q6Q0C0 670 aa9□□□□□ -0.97
MTHFD1-202ENST00000545908 ITCHQ96J02 903 aa9□□□□□ -0.97
MTHFD1-202ENST00000545908 GPR21Q99679 349 aa9□□□□□ -0.97
MTHFD1-202ENST00000545908 RXFP1Q9HBX9 757 aa9□□□□□ -0.97
MTHFD1-202ENST00000545908 N6AMT1Q9Y5N5 214 aa9□□□□□ -0.97
MTHFD1-202ENST00000545908 TPD52L2O43399 206 aaKnown RBP8.99□□□□□ -0.97
MTHFD1-202ENST00000545908 HNRNPH3P31942 346 aaKnown RBP8.99□□□□□ -0.97
MTHFD1-202ENST00000545908 SRSF11Q05519 484 aaKnown RBP8.99□□□□□ -0.97
MTHFD1-202ENST00000545908 ZNF155Q12901 538 aaPredicted RBP8.99□□□□□ -0.97
MTHFD1-202ENST00000545908 RCN1Q15293 331 aa8.99□□□□□ -0.97
MTHFD1-202ENST00000545908 SLC39A4Q6P5W5 647 aa8.99□□□□□ -0.97
MTHFD1-202ENST00000545908 CERS6Q6ZMG9 384 aa8.99□□□□□ -0.97
MTHFD1-202ENST00000545908 FAM20CQ8IXL6 584 aa8.99□□□□□ -0.97
MTHFD1-202ENST00000545908 ADGRG2Q8IZP9 1017 aa8.99□□□□□ -0.97
MTHFD1-202ENST00000545908 SMG8Q8ND04 991 aaKnown RBP8.99□□□□□ -0.97
MTHFD1-202ENST00000545908 ZCCHC10Q8TBK6 192 aa8.99□□□□□ -0.97
MTHFD1-202ENST00000545908 CARS2Q9HA77 564 aaKnown RBP8.99□□□□□ -0.97
MTHFD1-202ENST00000545908 MRPS30Q9NP92 439 aaKnown RBP8.99□□□□□ -0.97
MTHFD1-202ENST00000545908 SEMA3GQ9NS98 782 aa8.99□□□□□ -0.97
MTHFD1-202ENST00000545908 PHF24Q9UPV7 400 aa8.99□□□□□ -0.97
MTHFD1-202ENST00000545908 FAM237BA0A1B0GVD1 139 aa8.99□□□□□ -0.97
MTHFD1-202ENST00000545908 OR1F1O43749 312 aa8.99□□□□□ -0.97
MTHFD1-202ENST00000545908 SNUPNO95149 360 aaKnown RBP8.99□□□□□ -0.97
MTHFD1-202ENST00000545908 HNRNPA1P09651 372 aaKnown RBP eCLIP8.99□□□□□ -0.97
MTHFD1-202ENST00000545908 NMBRP28336 390 aa8.99□□□□□ -0.97
MTHFD1-202ENST00000545908 FEN1P39748 380 aaKnown RBP8.99□□□□□ -0.97
MTHFD1-202ENST00000545908 NPY5RQ15761 445 aa8.99□□□□□ -0.97
MTHFD1-202ENST00000545908 ZCWPW2Q504Y3 356 aa8.99□□□□□ -0.97
MTHFD1-202ENST00000545908 CEP78Q5JTW2 689 aa8.99□□□□□ -0.97
MTHFD1-202ENST00000545908 TMCO2Q7Z6W1 182 aaPredicted RBP8.99□□□□□ -0.97
MTHFD1-202ENST00000545908 DPP10Q8N608 796 aa8.99□□□□□ -0.97
MTHFD1-202ENST00000545908 ZNF784Q8NCA9 323 aaPredicted RBP8.99□□□□□ -0.97
MTHFD1-202ENST00000545908 ZNF461Q8TAF7 563 aa8.99□□□□□ -0.97
MTHFD1-202ENST00000545908 ITFG1Q8TB96 612 aa8.99□□□□□ -0.97
MTHFD1-202ENST00000545908 P2RY13Q9BPV8 354 aa8.99□□□□□ -0.97
MTHFD1-202ENST00000545908 C3orf14Q9HBI5 128 aa8.99□□□□□ -0.97
MTHFD1-202ENST00000545908 NUDT4Q9NZJ9 180 aa8.99□□□□□ -0.97
MTHFD1-202ENST00000545908 NOCTQ9UK39 431 aaKnown RBP8.99□□□□□ -0.97
MTHFD1-202ENST00000545908 EFR3BQ9Y2G0 817 aa8.99□□□□□ -0.97
MTHFD1-202ENST00000545908 PCDHB11Q9Y5F2 797 aa8.99□□□□□ -0.97
MTHFD1-202ENST00000545908 TTC24A2A3L6 582 aaPredicted RBP8.99□□□□□ -0.97
MTHFD1-202ENST00000545908 PITPNM1O00562 1244 aa8.99□□□□□ -0.97
MTHFD1-202ENST00000545908 MT-CYBP00156 380 aaPredicted RBP8.99□□□□□ -0.97
MTHFD1-202ENST00000545908 CCNYL3P0C7X3 344 aa8.99□□□□□ -0.97
MTHFD1-202ENST00000545908 CTSOP43234 321 aaPredicted RBP8.99□□□□□ -0.97
MTHFD1-202ENST00000545908 MANFP55145 182 aaKnown RBP8.99□□□□□ -0.97
MTHFD1-202ENST00000545908 RUNX1T1Q06455 604 aa8.99□□□□□ -0.97
MTHFD1-202ENST00000545908 INTS11Q5TA45 600 aaKnown RBP8.99□□□□□ -0.97
MTHFD1-202ENST00000545908 ZNF786Q8N393 782 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 95.3 ms