RNA–Protein interactions for RNA: ENST00000545663.5

CLSTN3-216, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-216ENST00000545663 LYPLAL1Q5VWZ2 237 aa15.21■□□□□ 0.03
CLSTN3-216ENST00000545663 RAET1GQ6H3X3 334 aa15.21■□□□□ 0.03
CLSTN3-216ENST00000545663 GJB7Q6PEY0 223 aa15.21■□□□□ 0.03
CLSTN3-216ENST00000545663 MYO7BQ6PIF6 2116 aa15.21■□□□□ 0.03
CLSTN3-216ENST00000545663 RFLNAQ6ZTI6 216 aa15.21■□□□□ 0.03
CLSTN3-216ENST00000545663 ZGRF1Q86YA3 2104 aa15.21■□□□□ 0.03
CLSTN3-216ENST00000545663 PARP9Q8IXQ6 854 aa15.21■□□□□ 0.03
CLSTN3-216ENST00000545663 GRHL3Q8TE85 626 aa15.21■□□□□ 0.03
CLSTN3-216ENST00000545663 MR1Q95460 341 aa15.21■□□□□ 0.03
CLSTN3-216ENST00000545663 ECHDC3Q96DC8 303 aa15.21■□□□□ 0.03
CLSTN3-216ENST00000545663 TMUB1Q9BVT8 246 aa15.21■□□□□ 0.03
CLSTN3-216ENST00000545663 CHST8Q9H2A9 424 aa15.21■□□□□ 0.03
CLSTN3-216ENST00000545663 CNOT8Q9UFF9 292 aaKnown RBP15.21■□□□□ 0.03
CLSTN3-216ENST00000545663 HPSEQ9Y251 543 aa15.21■□□□□ 0.03
CLSTN3-216ENST00000545663 KCNK6Q9Y257 313 aa15.21■□□□□ 0.03
CLSTN3-216ENST00000545663 CSAG2Q9Y5P2 127 aa15.21■□□□□ 0.03
CLSTN3-216ENST00000545663 A0A0U1RQS6 177 aa15.2■□□□□ 0.02
CLSTN3-216ENST00000545663 CD99P14209 185 aa15.2■□□□□ 0.02
CLSTN3-216ENST00000545663 DRD2P14416 443 aa15.2■□□□□ 0.02
CLSTN3-216ENST00000545663 ADRA1BP35368 520 aa15.2■□□□□ 0.02
CLSTN3-216ENST00000545663 PRCPP42785 496 aa15.2■□□□□ 0.02
CLSTN3-216ENST00000545663 GRM3Q14832 879 aa15.2■□□□□ 0.02
CLSTN3-216ENST00000545663 C2CD6Q53TS8 623 aa15.2■□□□□ 0.02
CLSTN3-216ENST00000545663 VWA2Q5GFL6 755 aa15.2■□□□□ 0.02
CLSTN3-216ENST00000545663 CACHD1Q5VU97 1274 aa15.2■□□□□ 0.02
CLSTN3-216ENST00000545663 DUS1LQ6P1R4 473 aaKnown RBP15.2■□□□□ 0.02
CLSTN3-216ENST00000545663 FAM92BQ6ZTR7 304 aa15.2■□□□□ 0.02
CLSTN3-216ENST00000545663 Q6ZVL8 140 aa15.2■□□□□ 0.02
CLSTN3-216ENST00000545663 MED25Q71SY5 747 aa15.2■□□□□ 0.02
CLSTN3-216ENST00000545663 SRLQ86TD4 932 aa15.2■□□□□ 0.02
CLSTN3-216ENST00000545663 SLC9B2Q86UD5 537 aa15.2■□□□□ 0.02
CLSTN3-216ENST00000545663 GALNT13Q8IUC8 556 aa15.2■□□□□ 0.02
CLSTN3-216ENST00000545663 PAF1Q8N7H5 531 aa15.2■□□□□ 0.02
CLSTN3-216ENST00000545663 ENDOVQ8N8Q3 282 aaKnown RBP15.2■□□□□ 0.02
CLSTN3-216ENST00000545663 SLC38A9Q8NBW4 561 aa15.2■□□□□ 0.02
CLSTN3-216ENST00000545663 KLHL6Q8WZ60 621 aa15.2■□□□□ 0.02
CLSTN3-216ENST00000545663 DTD2Q96FN9 168 aa15.2■□□□□ 0.02
CLSTN3-216ENST00000545663 LDHAL6BQ9BYZ2 381 aaPredicted RBP15.2■□□□□ 0.02
CLSTN3-216ENST00000545663 STN1Q9H668 368 aaKnown RBP15.2■□□□□ 0.02
CLSTN3-216ENST00000545663 ATP13A3Q9H7F0 1226 aa15.2■□□□□ 0.02
CLSTN3-216ENST00000545663 CHST11Q9NPF2 352 aa15.2■□□□□ 0.02
CLSTN3-216ENST00000545663 CPNE7Q9UBL6 633 aa15.2■□□□□ 0.02
CLSTN3-216ENST00000545663 ZNHIT2Q9UHR6 403 aa15.2■□□□□ 0.02
CLSTN3-216ENST00000545663 J3KR12 359 aa15.19■□□□□ 0.02
CLSTN3-216ENST00000545663 TOX3O15405 576 aaPredicted RBP15.19■□□□□ 0.02
CLSTN3-216ENST00000545663 SOD1P00441 154 aa15.19■□□□□ 0.02
CLSTN3-216ENST00000545663 SERPINA4P29622 427 aa15.19■□□□□ 0.02
CLSTN3-216ENST00000545663 SSTR2P30874 369 aa15.19■□□□□ 0.02
CLSTN3-216ENST00000545663 VAV2P52735 878 aa15.19■□□□□ 0.02
CLSTN3-216ENST00000545663 ATP11AP98196 1134 aa15.19■□□□□ 0.02
CLSTN3-216ENST00000545663 GPS2Q13227 327 aa15.19■□□□□ 0.02
CLSTN3-216ENST00000545663 TUBB3Q13509 450 aa15.19■□□□□ 0.02
CLSTN3-216ENST00000545663 FAM102AQ5T9C2 384 aaPredicted RBP15.19■□□□□ 0.02
CLSTN3-216ENST00000545663 IGFL3Q6UXB1 125 aa15.19■□□□□ 0.02
CLSTN3-216ENST00000545663 CERS6Q6ZMG9 384 aa15.19■□□□□ 0.02
CLSTN3-216ENST00000545663 BNC2Q6ZN30 1099 aaPredicted RBP15.19■□□□□ 0.02
CLSTN3-216ENST00000545663 Q6ZS92 163 aa15.19■□□□□ 0.02
CLSTN3-216ENST00000545663 CHST15Q7LFX5 561 aaPredicted RBP15.19■□□□□ 0.02
CLSTN3-216ENST00000545663 TMEM102Q8N9M5 508 aaPredicted RBP15.19■□□□□ 0.02
CLSTN3-216ENST00000545663 TSEN2Q8NCE0 465 aaKnown RBP15.19■□□□□ 0.02
CLSTN3-216ENST00000545663 SHC3Q92529 594 aa15.19■□□□□ 0.02
CLSTN3-216ENST00000545663 TBC1D31Q96DN5 1066 aa15.19■□□□□ 0.02
CLSTN3-216ENST00000545663 TIGD1Q96MW7 591 aa15.19■□□□□ 0.02
CLSTN3-216ENST00000545663 TUBGCP5Q96RT8 1024 aa15.19■□□□□ 0.02
CLSTN3-216ENST00000545663 EPB41L1Q9H4G0 881 aa15.19■□□□□ 0.02
CLSTN3-216ENST00000545663 GSX1Q9H4S2 264 aaPredicted RBP15.19■□□□□ 0.02
CLSTN3-216ENST00000545663 PDE7BQ9NP56 450 aa15.19■□□□□ 0.02
CLSTN3-216ENST00000545663 UBA2Q9UBT2 640 aaPredicted RBP15.19■□□□□ 0.02
CLSTN3-216ENST00000545663 CD84Q9UIB8 345 aa15.19■□□□□ 0.02
CLSTN3-216ENST00000545663 PCDHGC3Q9UN70 934 aa15.19■□□□□ 0.02
CLSTN3-216ENST00000545663 SNX7Q9UNH6 387 aa15.19■□□□□ 0.02
CLSTN3-216ENST00000545663 NEU2Q9Y3R4 380 aa15.19■□□□□ 0.02
CLSTN3-216ENST00000545663 NBEAL1Q6ZS30 2694 aa15.18■□□□□ 0.02
CLSTN3-216ENST00000545663 TTC24A2A3L6 582 aaPredicted RBP15.18■□□□□ 0.02
CLSTN3-216ENST00000545663 LILRA5A6NI73 299 aa15.18■□□□□ 0.02
CLSTN3-216ENST00000545663 C19orf84I3L1E1 186 aa15.18■□□□□ 0.02
CLSTN3-216ENST00000545663 MASP2O00187 686 aa15.18■□□□□ 0.02
CLSTN3-216ENST00000545663 TRAFD1O14545 582 aaPredicted RBP15.18■□□□□ 0.02
CLSTN3-216ENST00000545663 UBXN7O94888 489 aa15.18■□□□□ 0.02
CLSTN3-216ENST00000545663 EDN3P14138 238 aa15.18■□□□□ 0.02
CLSTN3-216ENST00000545663 CD1EP15812 388 aa15.18■□□□□ 0.02
CLSTN3-216ENST00000545663 NELFEP18615 380 aaKnown RBP15.18■□□□□ 0.02
CLSTN3-216ENST00000545663 CAPN3P20807 821 aa15.18■□□□□ 0.02
CLSTN3-216ENST00000545663 NDUFA8P51970 172 aa15.18■□□□□ 0.02
CLSTN3-216ENST00000545663 PPP1CAP62136 330 aa15.18■□□□□ 0.02
CLSTN3-216ENST00000545663 NRG1Q02297 640 aaPredicted RBP15.18■□□□□ 0.02
CLSTN3-216ENST00000545663 APBA1Q02410 837 aa15.18■□□□□ 0.02
CLSTN3-216ENST00000545663 LRP8Q14114 963 aa15.18■□□□□ 0.02
CLSTN3-216ENST00000545663 ZNF235Q14590 738 aa15.18■□□□□ 0.02
CLSTN3-216ENST00000545663 MRGPRGQ86SM5 289 aa15.18■□□□□ 0.02
CLSTN3-216ENST00000545663 ELOA2Q8IYF1 753 aaPredicted RBP15.18■□□□□ 0.02
CLSTN3-216ENST00000545663 RELTQ969Z4 430 aa15.18■□□□□ 0.02
CLSTN3-216ENST00000545663 MLPHQ9BV36 600 aaPredicted RBP15.18■□□□□ 0.02
CLSTN3-216ENST00000545663 RARRES3Q9UL19 164 aa15.18■□□□□ 0.02
CLSTN3-216ENST00000545663 GOLGA8SH3BPF8 625 aa15.17■□□□□ 0.02
CLSTN3-216ENST00000545663 HEXIM1O94992 359 aaKnown RBP15.17■□□□□ 0.02
CLSTN3-216ENST00000545663 ZNF202O95125 648 aa15.17■□□□□ 0.02
CLSTN3-216ENST00000545663 AMD1P17707 334 aa15.17■□□□□ 0.02
CLSTN3-216ENST00000545663 LHCGRP22888 699 aa15.17■□□□□ 0.02
CLSTN3-216ENST00000545663 GPR1P46091 355 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms