RNA–Protein interactions for RNA: ENST00000544907.6

TNFAIP1-202, Transcript of TNF alpha induced protein 1, humanhuman

TSL 2 BASIC

Gene TNFAIP1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP1-202ENST00000544907 DPP6P42658 865 aa17.94■□□□□ 0.46
TNFAIP1-202ENST00000544907 MAPK8P45983 427 aa17.94■□□□□ 0.46
TNFAIP1-202ENST00000544907 CSNK1DP48730 415 aa17.94■□□□□ 0.46
TNFAIP1-202ENST00000544907 SGSHP51688 502 aa17.94■□□□□ 0.46
TNFAIP1-202ENST00000544907 TRIM25Q14258 630 aaKnown RBP17.94■□□□□ 0.46
TNFAIP1-202ENST00000544907 PFKFB4Q16877 469 aa17.94■□□□□ 0.46
TNFAIP1-202ENST00000544907 MMEL1Q495T6 779 aa17.94■□□□□ 0.46
TNFAIP1-202ENST00000544907 AGKQ53H12 422 aa17.94■□□□□ 0.46
TNFAIP1-202ENST00000544907 REP15Q6BDI9 236 aa17.94■□□□□ 0.46
TNFAIP1-202ENST00000544907 PRMT9Q6P2P2 845 aa17.94■□□□□ 0.46
TNFAIP1-202ENST00000544907 SLC39A11Q8N1S5 342 aa17.94■□□□□ 0.46
TNFAIP1-202ENST00000544907 PCYOX1LQ8NBM8 494 aa17.94■□□□□ 0.46
TNFAIP1-202ENST00000544907 SH3RF2Q8TEC5 729 aa17.94■□□□□ 0.46
TNFAIP1-202ENST00000544907 ZFRQ96KR1 1074 aaKnown RBP17.94■□□□□ 0.46
TNFAIP1-202ENST00000544907 MARK4Q96L34 752 aa17.94■□□□□ 0.46
TNFAIP1-202ENST00000544907 GKN1Q9NS71 199 aa17.94■□□□□ 0.46
TNFAIP1-202ENST00000544907 LHX3Q9UBR4 397 aa17.94■□□□□ 0.46
TNFAIP1-202ENST00000544907 CNOT11Q9UKZ1 510 aaKnown RBP17.94■□□□□ 0.46
TNFAIP1-202ENST00000544907 PCDHB1Q9Y5F3 818 aa17.94■□□□□ 0.46
TNFAIP1-202ENST00000544907 PRSS51A0A1B0GVH4 220 aa17.93■□□□□ 0.46
TNFAIP1-202ENST00000544907 UBXN8O00124 270 aa17.93■□□□□ 0.46
TNFAIP1-202ENST00000544907 CLASP2O75122 1294 aaKnown RBP17.93■□□□□ 0.46
TNFAIP1-202ENST00000544907 C8BP07358 591 aa17.93■□□□□ 0.46
TNFAIP1-202ENST00000544907 GPX3P22352 226 aa17.93■□□□□ 0.46
TNFAIP1-202ENST00000544907 FMO4P31512 558 aa17.93■□□□□ 0.46
TNFAIP1-202ENST00000544907 CLCQ05315 142 aa17.93■□□□□ 0.46
TNFAIP1-202ENST00000544907 PLD1Q13393 1074 aa17.93■□□□□ 0.46
TNFAIP1-202ENST00000544907 TRIP10Q15642 601 aa17.93■□□□□ 0.46
TNFAIP1-202ENST00000544907 PTPRNQ16849 979 aa17.93■□□□□ 0.46
TNFAIP1-202ENST00000544907 SAMD4BQ5PRF9 694 aaKnown RBP17.93■□□□□ 0.46
TNFAIP1-202ENST00000544907 Q6ZNB5 142 aa17.93■□□□□ 0.46
TNFAIP1-202ENST00000544907 GK5Q6ZS86 529 aa17.93■□□□□ 0.46
TNFAIP1-202ENST00000544907 ITIH5Q86UX2 942 aa17.93■□□□□ 0.46
TNFAIP1-202ENST00000544907 PHYKPLQ8IUZ5 450 aa17.93■□□□□ 0.46
TNFAIP1-202ENST00000544907 UCMAQ8WVF2 138 aa17.93■□□□□ 0.46
TNFAIP1-202ENST00000544907 TWIST2Q8WVJ9 160 aa17.93■□□□□ 0.46
TNFAIP1-202ENST00000544907 FUBP1Q96AE4 644 aaKnown RBP17.93■□□□□ 0.46
TNFAIP1-202ENST00000544907 ZNF558Q96NG5 402 aa17.93■□□□□ 0.46
TNFAIP1-202ENST00000544907 NPAS2Q99743 824 aa17.93■□□□□ 0.46
TNFAIP1-202ENST00000544907 FEM1AQ9BSK4 669 aa17.93■□□□□ 0.46
TNFAIP1-202ENST00000544907 MID1IP1Q9NPA3 183 aa17.93■□□□□ 0.46
TNFAIP1-202ENST00000544907 TRMT6Q9UJA5 497 aaKnown RBP17.93■□□□□ 0.46
TNFAIP1-202ENST00000544907 NDUFAF1Q9Y375 327 aa17.93■□□□□ 0.46
TNFAIP1-202ENST00000544907 ACTL7AQ9Y615 435 aa17.93■□□□□ 0.46
TNFAIP1-202ENST00000544907 COL4A6Q14031 1691 aa17.93■□□□□ 0.46
TNFAIP1-202ENST00000544907 DPPA5A6NC42 116 aa17.93■□□□□ 0.46
TNFAIP1-202ENST00000544907 FBP2O00757 339 aa17.93■□□□□ 0.46
TNFAIP1-202ENST00000544907 TNRC18O15417 2968 aaPredicted RBP17.93■□□□□ 0.46
TNFAIP1-202ENST00000544907 MC4RP32245 332 aa17.93■□□□□ 0.46
TNFAIP1-202ENST00000544907 HMGCLP35914 325 aa17.93■□□□□ 0.46
TNFAIP1-202ENST00000544907 EPHB3P54753 998 aa17.93■□□□□ 0.46
TNFAIP1-202ENST00000544907 IL2P60568 153 aa17.93■□□□□ 0.46
TNFAIP1-202ENST00000544907 CREMQ03060 361 aa17.93■□□□□ 0.46
TNFAIP1-202ENST00000544907 CACNG1Q06432 222 aa17.93■□□□□ 0.46
TNFAIP1-202ENST00000544907 TRAF2Q12933 501 aa17.93■□□□□ 0.46
TNFAIP1-202ENST00000544907 ADGRE1Q14246 886 aa17.93■□□□□ 0.46
TNFAIP1-202ENST00000544907 PPP1R3AQ16821 1122 aa17.93■□□□□ 0.46
TNFAIP1-202ENST00000544907 MPP7Q5T2T1 576 aa17.93■□□□□ 0.46
TNFAIP1-202ENST00000544907 CLEC6AQ6EIG7 209 aa17.93■□□□□ 0.46
TNFAIP1-202ENST00000544907 OR52E8Q6IFG1 317 aa17.93■□□□□ 0.46
TNFAIP1-202ENST00000544907 SPATA19Q7Z5L4 167 aa17.93■□□□□ 0.46
TNFAIP1-202ENST00000544907 DNAJB7Q7Z6W7 309 aaPredicted RBP17.93■□□□□ 0.46
TNFAIP1-202ENST00000544907 PNPLA1Q8N8W4 532 aa17.93■□□□□ 0.46
TNFAIP1-202ENST00000544907 TET1Q8NFU7 2136 aa17.93■□□□□ 0.46
TNFAIP1-202ENST00000544907 ZNF483Q8TF39 744 aaPredicted RBP17.93■□□□□ 0.46
TNFAIP1-202ENST00000544907 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.93■□□□□ 0.46
TNFAIP1-202ENST00000544907 ZNF689Q96CS4 500 aaPredicted RBP17.93■□□□□ 0.46
TNFAIP1-202ENST00000544907 TMEM169Q96HH4 297 aa17.93■□□□□ 0.46
TNFAIP1-202ENST00000544907 HOPXQ9BPY8 73 aaPredicted RBP17.93■□□□□ 0.46
TNFAIP1-202ENST00000544907 AKTIPQ9H8T0 292 aa17.93■□□□□ 0.46
TNFAIP1-202ENST00000544907 IL23AQ9NPF7 189 aa17.93■□□□□ 0.46
TNFAIP1-202ENST00000544907 SDR39U1Q9NRG7 319 aaPredicted RBP17.93■□□□□ 0.46
TNFAIP1-202ENST00000544907 IL17CQ9P0M4 197 aa17.93■□□□□ 0.46
TNFAIP1-202ENST00000544907 TMEM181Q9P2C4 612 aa17.93■□□□□ 0.46
TNFAIP1-202ENST00000544907 CD300AQ9UGN4 299 aa17.93■□□□□ 0.46
TNFAIP1-202ENST00000544907 ZNF510Q9Y2H8 683 aa17.93■□□□□ 0.46
TNFAIP1-202ENST00000544907 FIS1Q9Y3D6 152 aa17.93■□□□□ 0.46
TNFAIP1-202ENST00000544907 MTF2Q9Y483 593 aaPredicted RBP17.93■□□□□ 0.46
TNFAIP1-202ENST00000544907 ASB3Q9Y575 518 aa17.93■□□□□ 0.46
TNFAIP1-202ENST00000544907 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP17.92■□□□□ 0.46
TNFAIP1-202ENST00000544907 C2orf78A6NCI8 922 aa17.92■□□□□ 0.46
TNFAIP1-202ENST00000544907 H0YJX3 145 aa17.92■□□□□ 0.46
TNFAIP1-202ENST00000544907 CFLARO15519 480 aa17.92■□□□□ 0.46
TNFAIP1-202ENST00000544907 GREM1O60565 184 aa17.92■□□□□ 0.46
TNFAIP1-202ENST00000544907 ECI2O75521 394 aa17.92■□□□□ 0.46
TNFAIP1-202ENST00000544907 TSPAN12O95859 305 aa17.92■□□□□ 0.46
TNFAIP1-202ENST00000544907 LYNP07948 512 aa17.92■□□□□ 0.46
TNFAIP1-202ENST00000544907 PRR35P0CG20 571 aa17.92■□□□□ 0.46
TNFAIP1-202ENST00000544907 IDO1P14902 403 aa17.92■□□□□ 0.46
TNFAIP1-202ENST00000544907 LBPP18428 481 aa17.92■□□□□ 0.46
TNFAIP1-202ENST00000544907 PEX2P28328 305 aa17.92■□□□□ 0.46
TNFAIP1-202ENST00000544907 HSPA13P48723 471 aa17.92■□□□□ 0.46
TNFAIP1-202ENST00000544907 MS4A2Q01362 244 aa17.92■□□□□ 0.46
TNFAIP1-202ENST00000544907 FOXM1Q08050 763 aa17.92■□□□□ 0.46
TNFAIP1-202ENST00000544907 MED21Q13503 144 aa17.92■□□□□ 0.46
TNFAIP1-202ENST00000544907 DDX53Q86TM3 631 aaKnown RBP17.92■□□□□ 0.46
TNFAIP1-202ENST00000544907 TICAM1Q8IUC6 712 aa17.92■□□□□ 0.46
TNFAIP1-202ENST00000544907 RYBPQ8N488 228 aaPredicted RBP17.92■□□□□ 0.46
TNFAIP1-202ENST00000544907 GOLM1Q8NBJ4 401 aa17.92■□□□□ 0.46
TNFAIP1-202ENST00000544907 ICA1LQ8NDH6 482 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms