RNA–Protein interactions for RNA: ENST00000544550.5

SNHG1-220, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 636 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-220ENST00000544550 ABHD17CQ6PCB6 329 aa4.11□□□□□ -1.75
SNHG1-220ENST00000544550 ENPP7Q6UWV6 458 aa4.11□□□□□ -1.75
SNHG1-220ENST00000544550 EPM2AIP1Q7L775 607 aaPredicted RBP4.11□□□□□ -1.75
SNHG1-220ENST00000544550 TAF8Q7Z7C8 310 aa4.11□□□□□ -1.75
SNHG1-220ENST00000544550 FAM129CQ86XR2 697 aa4.11□□□□□ -1.75
SNHG1-220ENST00000544550 NELFCDQ8IXH7 590 aa4.11□□□□□ -1.75
SNHG1-220ENST00000544550 ANKS4BQ8N8V4 417 aa4.11□□□□□ -1.75
SNHG1-220ENST00000544550 ATP6V0D2Q8N8Y2 350 aa4.11□□□□□ -1.75
SNHG1-220ENST00000544550 FAM46DQ8NEK8 389 aa4.11□□□□□ -1.75
SNHG1-220ENST00000544550 CXorf40AQ8TE69 158 aa4.11□□□□□ -1.75
SNHG1-220ENST00000544550 TMEM174Q8WUU8 243 aa4.11□□□□□ -1.75
SNHG1-220ENST00000544550 CENPTQ96BT3 561 aa4.11□□□□□ -1.75
SNHG1-220ENST00000544550 RTP4Q96DX8 246 aa4.11□□□□□ -1.75
SNHG1-220ENST00000544550 SLC39A13Q96H72 371 aa4.11□□□□□ -1.75
SNHG1-220ENST00000544550 EPSTI1Q96J88 318 aa4.11□□□□□ -1.75
SNHG1-220ENST00000544550 LURAP1Q96LR2 239 aa4.11□□□□□ -1.75
SNHG1-220ENST00000544550 RBM15Q96T37 977 aaKnown RBP eCLIP4.11□□□□□ -1.75
SNHG1-220ENST00000544550 FEM1AQ9BSK4 669 aa4.11□□□□□ -1.75
SNHG1-220ENST00000544550 SLC25A23Q9BV35 468 aa4.11□□□□□ -1.75
SNHG1-220ENST00000544550 UNKQ9C0B0 810 aaKnown RBP4.11□□□□□ -1.75
SNHG1-220ENST00000544550 TNMDQ9H2S6 317 aa4.11□□□□□ -1.75
SNHG1-220ENST00000544550 DPEP2Q9H4A9 486 aa4.11□□□□□ -1.75
SNHG1-220ENST00000544550 SP110Q9HB58 689 aa4.11□□□□□ -1.75
SNHG1-220ENST00000544550 RDH14Q9HBH5 336 aa4.11□□□□□ -1.75
SNHG1-220ENST00000544550 MRPL40Q9NQ50 206 aaKnown RBP4.11□□□□□ -1.75
SNHG1-220ENST00000544550 KLQ9UEF7 1012 aa4.11□□□□□ -1.75
SNHG1-220ENST00000544550 ITGB1BP2Q9UKP3 347 aa4.11□□□□□ -1.75
SNHG1-220ENST00000544550 TSPAN16Q9UKR8 245 aa4.11□□□□□ -1.75
SNHG1-220ENST00000544550 KIAA1257Q9ULG3 409 aa4.11□□□□□ -1.75
SNHG1-220ENST00000544550 FRMD4BQ9Y2L6 1034 aa4.11□□□□□ -1.75
SNHG1-220ENST00000544550 TMEM184BQ9Y519 407 aaPredicted RBP4.11□□□□□ -1.75
SNHG1-220ENST00000544550 DGKBQ9Y6T7 804 aa4.11□□□□□ -1.75
SNHG1-220ENST00000544550 USP9YO00507 2555 aaPredicted RBP4.11□□□□□ -1.75
SNHG1-220ENST00000544550 SPTAN1Q13813 2472 aaKnown RBP4.11□□□□□ -1.75
SNHG1-220ENST00000544550 A6NCN8 305 aa4.1□□□□□ -1.75
SNHG1-220ENST00000544550 ANKUB1A6NFN9 424 aa4.1□□□□□ -1.75
SNHG1-220ENST00000544550 NOTOA8MTQ0 251 aa4.1□□□□□ -1.75
SNHG1-220ENST00000544550 KCNU1A8MYU2 1149 aa4.1□□□□□ -1.75
SNHG1-220ENST00000544550 B4DGG1 531 aa4.1□□□□□ -1.75
SNHG1-220ENST00000544550 PRSS44E7EML9 344 aa4.1□□□□□ -1.75
SNHG1-220ENST00000544550 H7BY64 318 aa4.1□□□□□ -1.75
SNHG1-220ENST00000544550 NRDCO43847 1150 aa4.1□□□□□ -1.75
SNHG1-220ENST00000544550 CLDN11O75508 207 aa4.1□□□□□ -1.75
SNHG1-220ENST00000544550 TM7SF2O76062 418 aa4.1□□□□□ -1.75
SNHG1-220ENST00000544550 STK17BO94768 372 aa4.1□□□□□ -1.75
SNHG1-220ENST00000544550 CBX6O95503 412 aa4.1□□□□□ -1.75
SNHG1-220ENST00000544550 KELP23276 732 aa4.1□□□□□ -1.75
SNHG1-220ENST00000544550 ALDH4A1P30038 563 aa4.1□□□□□ -1.75
SNHG1-220ENST00000544550 HOXD13P35453 343 aa4.1□□□□□ -1.75
SNHG1-220ENST00000544550 DLSTP36957 453 aa4.1□□□□□ -1.75
SNHG1-220ENST00000544550 STAT5AP42229 794 aa4.1□□□□□ -1.75
SNHG1-220ENST00000544550 RAD23BP54727 409 aa4.1□□□□□ -1.75
SNHG1-220ENST00000544550 HDAC4P56524 1084 aa4.1□□□□□ -1.75
SNHG1-220ENST00000544550 SRP54P61011 504 aaKnown RBP4.1□□□□□ -1.75
SNHG1-220ENST00000544550 YWHAEP62258 255 aaKnown RBP4.1□□□□□ -1.75
SNHG1-220ENST00000544550 CHRNEQ04844 493 aa4.1□□□□□ -1.75
SNHG1-220ENST00000544550 ENPEPQ07075 957 aa4.1□□□□□ -1.75
SNHG1-220ENST00000544550 RAPGEF1Q13905 1077 aa4.1□□□□□ -1.75
SNHG1-220ENST00000544550 NFATC4Q14934 902 aa4.1□□□□□ -1.75
SNHG1-220ENST00000544550 STILQ15468 1287 aa4.1□□□□□ -1.75
SNHG1-220ENST00000544550 CHRNA6Q15825 494 aa4.1□□□□□ -1.75
SNHG1-220ENST00000544550 SEPT7Q16181 437 aaKnown RBP4.1□□□□□ -1.75
SNHG1-220ENST00000544550 ALG11Q2TAA5 492 aa4.1□□□□□ -1.75
SNHG1-220ENST00000544550 GOLGA7BQ2TAP0 167 aa4.1□□□□□ -1.75
SNHG1-220ENST00000544550 NADK2Q4G0N4 442 aa4.1□□□□□ -1.75
SNHG1-220ENST00000544550 PAPD7Q5XG87 772 aaKnown RBP4.1□□□□□ -1.75
SNHG1-220ENST00000544550 ANKS6Q68DC2 871 aa4.1□□□□□ -1.75
SNHG1-220ENST00000544550 SPECC1LQ69YQ0 1117 aa4.1□□□□□ -1.75
SNHG1-220ENST00000544550 CXorf57Q6NSI4 855 aaKnown RBP4.1□□□□□ -1.75
SNHG1-220ENST00000544550 JMJD6Q6NYC1 403 aaPredicted RBP4.1□□□□□ -1.75
SNHG1-220ENST00000544550 C22orf39Q6P5X5 142 aa4.1□□□□□ -1.75
SNHG1-220ENST00000544550 TMEM71Q6P5X7 295 aa4.1□□□□□ -1.75
SNHG1-220ENST00000544550 DPY19L3Q6ZPD9 716 aa4.1□□□□□ -1.75
SNHG1-220ENST00000544550 UBE2R2Q712K3 238 aaPredicted RBP4.1□□□□□ -1.75
SNHG1-220ENST00000544550 PARS2Q7L3T8 475 aaKnown RBP4.1□□□□□ -1.75
SNHG1-220ENST00000544550 BEND5Q7L4P6 421 aa4.1□□□□□ -1.75
SNHG1-220ENST00000544550 VPS36Q86VN1 386 aa4.1□□□□□ -1.75
SNHG1-220ENST00000544550 SKAP1Q86WV1 359 aa4.1□□□□□ -1.75
SNHG1-220ENST00000544550 KIF18BQ86Y91 864 aa4.1□□□□□ -1.75
SNHG1-220ENST00000544550 IRF2BP1Q8IU81 584 aa4.1□□□□□ -1.75
SNHG1-220ENST00000544550 SPPL2CQ8IUH8 684 aa4.1□□□□□ -1.75
SNHG1-220ENST00000544550 ZC3H7AQ8IWR0 971 aaKnown RBP4.1□□□□□ -1.75
SNHG1-220ENST00000544550 RHOT1Q8IXI2 618 aa4.1□□□□□ -1.75
SNHG1-220ENST00000544550 UNC5BQ8IZJ1 945 aa4.1□□□□□ -1.75
SNHG1-220ENST00000544550 AFAP1L2Q8N4X5 818 aa4.1□□□□□ -1.75
SNHG1-220ENST00000544550 PCDH20Q8N6Y1 951 aaKnown RBP4.1□□□□□ -1.75
SNHG1-220ENST00000544550 UBR7Q8N806 425 aa4.1□□□□□ -1.75
SNHG1-220ENST00000544550 DCAF4L2Q8NA75 395 aa4.1□□□□□ -1.75
SNHG1-220ENST00000544550 SLC4A11Q8NBS3 891 aa4.1□□□□□ -1.75
SNHG1-220ENST00000544550 PLEKHO2Q8TD55 490 aa4.1□□□□□ -1.75
SNHG1-220ENST00000544550 DQX1Q8TE96 717 aaKnown RBP4.1□□□□□ -1.75
SNHG1-220ENST00000544550 THAP4Q8WY91 577 aa4.1□□□□□ -1.75
SNHG1-220ENST00000544550 NDRG1Q92597 394 aaKnown RBP4.1□□□□□ -1.75
SNHG1-220ENST00000544550 PNPLA2Q96AD5 504 aa4.1□□□□□ -1.75
SNHG1-220ENST00000544550 MYEOVQ96EZ4 313 aa4.1□□□□□ -1.75
SNHG1-220ENST00000544550 ALG14Q96F25 216 aa4.1□□□□□ -1.75
SNHG1-220ENST00000544550 CCDC120Q96HB5 630 aa4.1□□□□□ -1.75
SNHG1-220ENST00000544550 HSFY1Q96LI6 401 aa4.1□□□□□ -1.75
SNHG1-220ENST00000544550 WDR92Q96MX6 357 aa4.1□□□□□ -1.75
SNHG1-220ENST00000544550 RPRD1AQ96P16 312 aaPredicted RBP4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms